2025
Articles référencés dans le Web of Science
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Aqbouch L., Abou-Saaid O., Sarah G., Zunino L., Segura V., Mournet P., Bonal F., Zaher H., El Bakkali A., Cubry Philippe, Costes E., Khadari B. (2025). Genome-wide association analysis of flowering date in a collection of cultivated olive tree. Horticulture Research, 12 (1), p. uhae265 [13 p.]. ISSN 2662-6810.
Identifiant IRD : fdi:010092590 -
Arenas S., Djabali Y., Rincent R., Cubry Philippe, Martin M. L., Blein-Nicolas M., Laplaze Laurent, Schneider H., Grondin Alexandre. (2025). Modeling plant phenotypic plasticity and its underlying genetic architecture : a comparative study. Journal of Experimental Botany, [Early access], p. [13 p.]. ISSN 0022-0957.
Identifiant IRD : fdi:010092755 -
Beckers A., Mamiya A., Furutani M., Bennett M. J., Fukaki H., Sawa S., Gantet Pascal, Laplaze Laurent, Guyomarc'h S. (2025). Multiple layers of regulators emerge in the network controlling lateral root organogenesis. Trends in Plant Science, 30 (5), p. 499-514. ISSN 1360-1385.
Identifiant IRD : fdi:010094202 -
Besseiche M., Chambraud E., Dabrowski V., Brandstatt E., Sabot François, Bouchaud C., Gros-Balthazard Muriel. (2025). DateBack, an evolving open-access repository of Phoenix archaeobotanical data supporting new perspectives on the history of date palm cultivation. Peer Community Journal, 5, p. e55 [28 p.].
Identifiant IRD : fdi:010093627 -
Birhan T., Abajebel N., Wakjira M., Mitiku T., Vadez Vincent, Tadege M., Paterson A. H., Bantte K. (2025). Harnessing the genetic potential of exotic sorghum germplasm for drought resilience in arid regions of Ethiopia. Frontiers in Plant Science, 16, p. 1548591 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010093448 -
Branco C., Roxo G., Chapoix I., Rego R. M. C., Tessarotto Hugo, Santoni S., Moura M., Marais G. A. B. (2025). An XY chromosome system in Laurus azorica, an endemic dioecious laurel from the Azores. Journal of Evolutionary Biology, [Early access], p. [ p.]. ISSN 1010-061X.
Identifiant IRD : PAR00029427 -
Cabral A., Bender I. M. A., Couvreur Thomas, Faurby S., Hagen O., Hensen I., Kühn I., Rodrigues-Vaz C., Sauquet H., Tobias J. A., Onstein R. E. (2025). Seed-dispersing vertebrates and the abiotic environment shape functional diversity of the pantropical Annonaceae. New Phytologist, [Early access], p. [17 p.]. ISSN 0028-646X.
Identifiant IRD : fdi:010093405 -
Chakocha A. F. N., Avana M. L. T., Momo M. C. S., Rimlinger A., Mboujda F. M. M., Duminil Jérôme. (2025). Ethnoecological knowledge and management strategies for Canarium schweinfurthii (burseraceae) in forest and savanna zones of Cameroon. Economic Botany, [Early access], p. [19 p.]. ISSN 0013-0001.
Identifiant IRD : fdi:010093362 -
Coulibaly K.R.L., Thio B., Collin Myriam, Koita K., Sanou J., Fernandez Diana. (2025). Life cycle of the root-knot nematode Meloidogyne javanica in papaya and histological analyses of root infection and gall development. Tropical Plant Pathology, 50 (1), 30 [11 p.]. ISSN 1983-2052.
Identifiant IRD : fdi:010093289 -
Fioroni Nelly, Rodríguez M. D. P. D., Leconte Nicolas, Mouquet Rivier Claire, Guzman C., Boudard F., Dhuique-Mayer C., Collin Myriam, Deglos A., Reboul E., Bravo-Núñez A., Laurent-Babot C. (2025). Development of an in vitro triculture model of intestine inflammation to assess the immunomodulatory properties of cassava and roselle, two African green leafy vegetables. NFS Journal, 38, p. 100213 [15 p.]. ISSN 2352-3646.
Identifiant IRD : fdi:010092650 -
Hajjarpoor A., Pavlík J., Hora J., Konopásek J., Pusupuleti J., Vadez Vincent, Soltani A., Feike T., Stoces M., Jarolimek J., Kholová J. (2025). In-silico optimization of peanut production in India through envirotyping and ideotyping. Computers and Electronics in Agriculture, 235, p. 110383 [16 p.]. ISSN 0168-1699.
Identifiant IRD : fdi:010093479 -
Helmstetter A. J., Ezedin Z., de Lírio E. J., de Oliveira S. M., Chatrou L. W., Erkens R. H. J., Larridon I., Leempoel K., Maurin O., Roy S., Zuntini A. R., Baker W. J., Couvreur Thomas, Forest F., Sauquet H. (2025). Toward a phylogenomic classification of magnoliids. American Journal of Botany, [Early access], p. [24 p.]. ISSN 0002-9122.
Identifiant IRD : fdi:010092621 -
Kaczmarek Thomas, Cubry Philippe, Champion Louis, Causse S., Couderc Marie, Orjuela J., Uyoh E. A., Oselebe H. O., Dachi S. N., Adje C. O. A., Sekloka E., Achigan-Dako E. G., Yerima Arib, Saidou S. I., Bakasso Y., Diop B. M., Gueye M. C., Agyare R. Y., Adjebeng-Danquah J., Gueye M., Wieringa J. J., Vigouroux Yves, Billot C., Barnaud Adeline, Leclerc C. (2025). Independent domestication and cultivation histories of two West African indigenous fonio millet crops. Nature Communications, 16 (1), p. 4067 [12 p.].
Identifiant IRD : fdi:010093523 -
Mbodj D., Diedhiou A. G., Manneh B., Ndiaye C., Laplaze Laurent, Kane A. (2025). AMF inoculation reduces yield losses in rice exposed to alternate wetting and drying and low fertilization. Scientific Reports - Nature, 15 (1), p. 12281 [ p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010093439 -
Nakombo-Gbassault P., Arenas S., Affortit P., Faye A., Flis P., Sine B., Moukouanga Daniel, Gantet Pascal, Komba E. K., Kane N., Bennett M., Wells D., Cubry Philippe, Bailey E., Grondin Alexandre, Vigouroux Yves, Laplaze Laurent. (2025). Genetic control of the leaf ionome in pearl millet and correlation with root and agromorphological traits. PLoS One, 20 (5), p. e0319140 [22 p.].
Identifiant IRD : fdi:010093561 -
Ñañez J., Valdes S., Gallego M. C., Rebolledo M. C., Lorieux Mathias, Alvarez M. F., Chavarriaga P. (2025). Revealing the role of the AGO4 gene against rice hoja blanca virus : from transformation to protein structure. Frontiers in Plant Science, 16, p. 1517321 [11 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010093413 -
Ndecky S., Malherbe L., Villette C., Chalvon V., Meusnier I., Beltran-Valencia D., Baumberger N., Riemann M., Kroj T., Champion Antony, Heitz T. (2025). Rice JASMONIC ACID OXIDASES control resting jasmonate metabolism to promote growth and repress basal immune responses. Plant Physiology, 198 (1), p. kiaf161 [19 p.]. ISSN 0032-0889.
Identifiant IRD : fdi:010093525 -
Nguyen T. D., Gonin M., Motyka M., Champion Antony, Hensel G., Gantet Pascal, Bergougnoux V. (2025). Two lateral organ boundary domain transcription factors HvCRL1 and HvCRL1L1 regulate shoot-borne root formation in barley (Hordeum vulgare L.). Journal of Plant Growth Regulation, [Early access], p. [13 p.]. ISSN 0721-7595.
Identifiant IRD : fdi:010092858 -
Pillon Yohan, Bruy David, Henry B., Gotty K. (2025). A new monocaulous species of Virotia (Proteaceae) from New Caledonia and a rare case of co-accumulation of nickel and manganese. Telopea, 29, p. 149-154. ISSN 0312-9764.
Identifiant IRD : fdi:010094168 -
Robin-Soriano A., Vincent B., Maurice K., Battesti V., Boukcim H., Ducousso M., Gros-Balthazard Muriel. (2025). Digging deeper into the impacts of different soil water systems on the date palm root architecture and associated fungal communities. Symbiosis, 95, 81-98. ISSN 0334-5114.
Identifiant IRD : fdi:010092749 -
Rodrigues-Vaz C., Deroin T., Le Disquet I., Couvreur Thomas. (2025). Notes on the floral anatomy of Annona haematantha Miq. : an unexpected and specialized annonaceous corolla. Adansonia, 47 (9), p. 145-156. ISSN 1280-8571.
Identifiant IRD : fdi:010094246 -
Scarcelli Nora, Mariac Cédric, Couderc Marie, Castro Ruiz D., Estivals G., Custodio Angulo Chavez C.A., Acho Vasquez H., Alvarado Reategui J.G., Vizcarra Bentos T., Garcia-Davila C. (2025). The complete chloroplast genome of Tornillo (Cedrelinga cateniformis Ducke 1922, Fabaceae). Ecology and Evolution, 15 (4), e71355 [5 p.]. ISSN 2045-7758.
Identifiant IRD : fdi:010093647 -
Sikirou M., Dramé K. N., Saito K., Bocco R., Lorieux Mathias. (2025). Phenotypic variation among IR64 x TOG5681 rice (Oryza sativa x O. glaberrima) chromosome segment substitution lines (CSSL) in response to iron toxicity, and its associated QTLs. Euphytica, 221 (2), p. 16 [11 p.]. ISSN 0014-2336.
Identifiant IRD : fdi:010092655 -
Tardif Delphine, Condamine F. L., Streiff S. J. R., Sepulchre P., Couvreur Thomas. (2025). Generating spatialised and seasonal deep-time palaeoclimatic information : integration into an environmental-dependent diversification model. Global Ecology and Biogeography, 34 (4), p. e70024 [21 p.]. ISSN 1466-822X.
Identifiant IRD : fdi:010093355 -
Tibiri E. B., Boua P. R., Soulama I., Dubreuil Tranchant Christine, Tando Ndomassi, Tollenaere Charlotte, Brugidou Christophe, Nanema R. K., Tiendrebeogo F. (2025). Challenges and opportunities of developing bioinformatics platforms in Africa : the case of BurkinaBioinfo at Joseph Ki-Zerbo University, Burkina Faso. Briefings in Bioinformatics, 26 (1), p. bbaf040 [5 p.]. ISSN 1467-5463.
Identifiant IRD : fdi:010092672 -
Tranbarger Timothy, Tadeo F. R. (2025). Abscission zone metabolism impacts pre- and post-harvest fruit quality : a very attaching story. Frontiers in Plant Science, 15, p. 1524893 [20 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010092810 -
Triay Cécile, Boizet A., Fragoso C., Gkanogiannis A., Rami J. F., Lorieux Mathias. (2025). Fast and accurate imputation of genotypes from noisy low-coverage sequencing data in bi-parental populations. PLoS One, 20 (1), p. e0314759 [20 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010093560 -
Vi T., Le T. N., Cubry Philippe, Phan V. H., Dinh T. T. O., Tran T. B. N., Nguyen V., Millet C. P., Kambale J. L., Karine G. K. M., Musoli P., Sumirat U., Mahinga J. C., Stoffelen P., Zhang D. P., Marraccini P., Vigouroux Yves, Khong N. G., Poncet Valérie. (2025). Out of Africa : the genomic footprints of Vietnamese Robusta coffee. PLoS One, 20 (5), p. e0324988 [17 p.].
Identifiant IRD : fdi:010093620 -
Vidal L. D., Nascimento E. F. M. B., Grynberg P., Togawa R., Maranhao A. Q., Martins N. F., Petitot Anne-Sophie, Fernandez Diana, Albuquerque E. V. S. (2025). Transcriptomic analyses reveal the involvement of miraculin family genes in the incompatible interaction between Meloidogyne incognita and coffee ( Coffea arabica L.). Physiological and Molecular Plant Pathology, 136, p. 102539 [13 p.]. ISSN 0885-5765.
Identifiant IRD : fdi:010092579 -
Xue Wenli, Kissel E., Tóth A., Pilloni R., Vadez Vincent. (2025). Identifying phenotypic markers explaining positive sorghum response to sowing density using 3D-imaging. Smart Agricultural Technology, 10, p. 100756 [10 p.]. ISSN 2772-3755.
Identifiant IRD : fdi:010092618
Articles
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Bergheaud V., Audergon J.M., Bellec A., Delaunay A., Duminil Jérôme, Dussert Stéphane, Esnault F., Geoffriau E., Gouesnard B., Jenny C., Label A., Lashermes Philippe, Maghnaoui N., Marchal C., Nuissier F., Paulo-de-la-Réberdiere N., Priet A., Térès P., Adam-Blondon A.F. (2025). Organization of plant biological resource centers for research in France : history, evolution and current status. Genetic Resources, S2, 78-90. ISSN 2708-3764.
Identifiant IRD : fdi:010093265 -
Gonzalez D.C., Tranbarger Timothy, Isaza C. (2025). Ethnobotany of Acrocomia aculeata (Jacq.) Lodd. ex Mart. in two ecoregions of Colombia. Ethnobotany Research and Applications, 31, 16 [24 p.]. ISSN 1547-3465.
Identifiant IRD : fdi:010094073
2024
Articles référencés dans le Web of Science
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Adeoti K., Salako K. V., Daa-Kpodé U. A., Ouédraogo A., Santoni S., Aberlenc Frédérique, Kpatènon M. J., Latreille M., Tollon-Cordet C., Etsè K. D., Mahmoud O. H. A., Faye A., Jaligot E., Beulé T. (2024). Efficiency of simple sequence repeat (SSR) markers in genetic diversity study and differentiation of Borassus aethiopum Mart. and Borassus akeassii Bayton, Ouédr. & Guinko. Genetic Resources and Crop Evolution, p. [17 p.]. ISSN 0925-9864.
Identifiant IRD : fdi:010091091 -
Adji B. I., Wang X. J., Letort V., Akaffou D. S., Sabatier S., Kang M. Z., Kouassi K. H., Barima Y. S., Duminil Jérôme, Jaeger M., De Reffye P. (2024). Stochastic modelling of development and biomass allocation : computation applied to architecture of young mahogany trees (Khaya senegalensis Desr. A. Juss), a native African savannah emblematic agroforestry species. Computers and Electronics in Agriculture, 220, 108864 [17 p.]. ISSN 0168-1699.
Identifiant IRD : fdi:010090651 -
Affortit P., Ahmed M. A., Grondin Alexandre, Delzon S., Carminati A., Laplaze Laurent. (2024). Keep in touch : the soil-root hydraulic continuum and its role in drought resistance in crops. Journal of Experimental Botany, 75 (2), p. 584-593. ISSN 0022-0957.
Identifiant IRD : fdi:010089649 -
Agyare R. Y., Kaczmarek T., Leclerc C., Puozaa D. K., Tengey T. K., Bonsu S. K., Kombiok J. M., Causse S., Guillerminet T., Kena A. W., Adjebeng-Danquah J., Barnaud Adeline, Billot C., Akromah R. (2024). Revealing Ghana's unique fonio genetic diversity : leveraging farmers knowledge for sustainable conservation and breeding strategies. Genetic Resources and Crop Evolution, [Early access], p. [19 p.]. ISSN 0925-9864.
Identifiant IRD : fdi:010090553 -
Alahmad A., Harir M., Fochesato S., Tulumello J., Walker A., Barakat M., Ndour Papa Mamadou Sitor, Schmitt-Kopplin P., Cournac Laurent, Laplaze Laurent, Heulin T., Achouak W. (2024). Unraveling the interplay between root exudates, microbiota, and rhizosheath formation in pearl millet. Microbiome, 12 (1), 1 [17 p.]. ISSN 2049-2618.
Identifiant IRD : fdi:010088886 -
Belton S., Cubry Philippe, Roche J. R., Kelleher C. T. (2024). Molecular characterisation of Pinus sylvestris (L.) in Ireland at the western limit of the species distribution. BMC Ecology and Evolution, 24 (1), 12 [19 p.].
Identifiant IRD : fdi:010089480 -
Berube B., Ernst E., Cahn J., Roche Benjamin, de Santis Alves C., Lynn J., Scheben A., Grimanelli Daniel, Siepel A., Ross-Ibarra J., Kermicle J., Martienssen R. A. (2024). Teosinte Pollen Drive guides maize diversification and domestication by RNAi. Nature, 633 (8029), p. 380-388 + 19 p. ISSN 0028-0836.
Identifiant IRD : fdi:010092921 -
Bezandry R., Dupeyron M., Gonzalez-Garcia L. N., Anest A., Hamon Perla, Ranarijaona H. L. T., Vavitsara M. E., Sabatier S., Guyot Romain, Winter S. (2024). The evolutionary history of three Baracoffea species from western Madagascar revealed by chloroplast and nuclear genomes. PLoS One, 19 (1), p. e0296362 [16 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010089523 -
Bonatti M., Lana M., Medina L., Chevelev P., Baldivieso C., Errismann C., Gleich P., Rodriguez T., Eufemia L., Rosa T. D., Borba J., Matavel C., Schlindwein S., Ison R., Eisenack K., Hellin J., Pacillo G., Vadez Vincent, Bossuet J., Dolinska A., Sieber S. (2024). Global analysis of social learning's archetypes in natural resource management : understanding pathways of co-creation of knowledge. Humanities and Social Sciences Communications, 11 (1), p. 1161 [16 p.].
Identifiant IRD : fdi:010091311 -
Bouka G. U. D., Doumenge C., Ekue M. R. M., Duminil Jérôme, Florence Jacques, Degen B., Loumeto J. J., McKey D., Hardy O. J. (2024). Genetic differentiation in Khaya Ivorensis A. Chev., a threaten tree of evergreen African rainforests. Tree Genetics and Genomes, 20 (6), p. 41 [14 p.]. ISSN 1614-2942.
Identifiant IRD : fdi:010092003 -
Bourgeois Yann, Warren B., Augiron S. (2024). The burden of anthropogenic changes and mutation load in a critically endangered harrier from the Reunion biodiversity hotspot, Circus maillardi. Molecular Ecology, [Early acces], p. e17300 [18 p.]. ISSN 0962-1083.
Identifiant IRD : fdi:010089599 -
Cabello S. S., Rodríguez-Rodríguez P., Ramírez G. A., Naranjo-Cigala A., Curbelo L., Gomes M. D. D., Brito J., Aberlenc Frédérique, Zehdi-Azouzi S., Sosa P. A. (2024). A comparative genetic analysis of Phoenix atlantica in Cape Verde. Plants, 13 (16), p. 2209 [15 p.]. ISSN 2223-7747.
Identifiant IRD : fdi:010091315 -
Cheaib M., Nguyen H. T., Couderc Marie, Serret Julien, Soriano A., Larmande Pierre, Richter C., Junker B. H., Raorane M. L., Petitot Anne-Sophie, Champion Antony. (2024). Transcriptomic and metabolomic reveal OsCOI2 as the jasmonate-receptor master switch in rice root. PLoS One, 19 (10), p. e0311136 [24 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010092094 -
Couvreur Thomas, Jijon N., Montufar R., Morales-Morales P. A., Sanin M. J., Copete J. C., Lozinguez Alix, Pérez A. J., Beech E. (2024). Diversity and conservation status of palms (Arecaceae) in two hotspots of biodiversity in Colombia and Ecuador. Plants People Planet, [Early access], p. [17 p.].
Identifiant IRD : fdi:010089998 -
D'Agostini F., Pérez J. R., Madella M., Vadez Vincent, Lancelotti C. (2024). Predicting plant water availability from phytolith assemblages : an experimental approach for archaeological reconstructions in drylands. Vegetation History and Archaeobotany, [Early access], p. [17 p.]. ISSN 0939-6314.
Identifiant IRD : fdi:010092071 -
de la Fuente C., Grondin Alexandre, Sine B., Debieu Marilyne, Belin C., Hajjarpoor Amir, Atkinson J. A., Passot S., Salson M., Orjuela J., Dubreuil Tranchant Christine, Brossier J. R., Steffen M., Morgado C., Dinh H. N., Pandey B. K., Darmau J., Champion Antony, Petitot Anne-Sophie, Barrachina C., Pratlong M., Mounier T., Nakombo-Gbassault P., Gantet Pascal, Gangashetty P., Guedon Y., Vadez Vincent, Reichheld J. P., Bennett M. J., Kane N. A., Guyomarc'h S., Wells D. M., Vigouroux Yves, Laplaze Laurent. (2024). Glutaredoxin regulation of primary root growth is associated with early drought stress tolerance in pearl millet. eLife, 12, p. RP86169 [21 p.]. ISSN 2050-084X.
Identifiant IRD : fdi:010089568 -
de Lemos S. M. C., Paschoal A. R., Guyot Romain, Medema M., Domingues D. S. (2024). Genome mining of metabolic gene clusters in the Rubiaceae family. Computational and Structural Biotechnology Journal, 23, p. 22-33. ISSN 2001-0370.
Identifiant IRD : fdi:010088893 -
Debels P., Drieu L., Chiquet P., Studer J., Malergue A., Martignac L., Champion Louis, Garnier A., Fichet V., Sall M., Regert M., Mayor A. (2024). Investigating grandmothers' cooking : a multidisciplinary approach to foodways on an archaeological dump in Lower Casamance, Senegal. PLoS One, 19 (5), p. e0295794 [21 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010091141 -
Devic M., Dennu L., Lozano J. C., Mariac Cédric, Vergé V., Schatt P., Bouget F. Y., Sabot François. (2024). An INDEL genomic approach to explore population diversity of phytoplankton. BMC Genomics, 25 (1), 1045 [13 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010092082 -
Diancoumba M., Kholová J., Adam M., Famanta M., Clerget B., Traore P. C. S., Weltzien E., Vacksmann M., McLean G., Hammer G. L., van Oosterom E. J., Vadez Vincent. (2024). APSIM-based modeling approach to understand sorghum production environments in Mali. Agronomy for Sustainable Development, 44 (3), p. 25 [16 p.]. ISSN 1774-0746.
Identifiant IRD : fdi:010090551 -
Fonseca L. H. M., Asselman P., Goodrich K. R., Nge F. J., Soule Vincent, Mercier K., Couvreur Thomas, Chatrou L. W. (2024). Truly the best of both worlds : merging lineage-specific and universal probe kits to maximize phylogenomic inference. Applications in Plant Sciences, [Early access], p. [13 p.]. ISSN 2168-0450.
Identifiant IRD : fdi:010091391 -
Fuks D., Schmidt F., García-Collado M. I., Besseiche M., Payne N., Bosi G., Bouchaud C., Castiglioni E., Dabrowski V., Frumin S., Fuller D. Q., Hovsepyan R., Muthukumaran S., Peña-Chocarro L., Jordá G. P., Ros J., Rottoli M., Ryan P., Spengler R., Stevens C. J., Valamoti S. M., Weiss E., Alexander M., Gros-Balthazard Muriel. (2024). Orphan crops of archaeology-based crop history research. Plants People Planet, [Early access], p. [28 p.].
Identifiant IRD : fdi:010088952 -
Fuller D. Q., Champion Louis, Castillo C. C., den Hollander A. (2024). Cotton and post-Neolithic investment agriculture in tropical Asia and Africa, with two routes to West Africa. Journal of Archaeological Science-Reports, 57, p. 104649 [13 p.]. ISSN 2352-409X.
Identifiant IRD : fdi:010091080 -
Garba H., Hamidou F., Abdou H., Burridge James, Vadez Vincent. (2024). Effect of vapor pressure deficit on growth and yield of pearl millet germplasm originating from semi-arid, semi-humid and humid regions. Frontiers in Plant Science, 15, p. 1465686 [10 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010092275 -
Grégoire Laura, Kholova J., Srivastava R., Hash C. T., Vigouroux Yves, Vadez Vincent. (2024). Transpiration efficiency variations in the pearl millet reference collection PMiGAP. PLoS One, 19 (7), p. e0299686 [13 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010091220 -
Grondin Alexandre, Li M., Bhosale R., Sawers R., Schneider H. M. (2024). Interplay between developmental cues and rhizosphere signals from mycorrhizal fungi shape root anatomy, impacting crop productivity. Plant and Soil, [Early access], p. [8 p.]. ISSN 0032-079X.
Identifiant IRD : fdi:010089653 -
Grondin Alexandre, Natividad M. A., Ogata T., Jan A. S., Gaudin A. C. M., Trijatmiko K. R., Liwanag E., Maruyama K., Fujita Y., Yamaguchi-Shinozaki K., Nakashima K., Slamet-Loedin I. H., Henry A. (2024). A case study from the overexpression of OsTZF5, encoding a CCCH tandem zinc finger protein, in rice plants across nineteen yield trials. Rice, 17 (1), p. 25 [16 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010090519 -
Hauser M., Doria C. R. C., Pecheyran C., Ponzevera E., Panfili Jacques, Torrente-Vilara G., Renno Jean-François, Freitas C. E., Garcia-Dávila C., Duponchelle Fabrice. (2024). Quantitative impacts of hydroelectric dams on the trans-Amazonian migrations of goliath catfish. Conservation Letters, 17 (5), e13046 [11 p.]. ISSN 1755-263X.
Identifiant IRD : fdi:010091275 -
Hocedez J., Gotty K., Hequet Vanessa, Chay S., Léopold A., Dray S., Pillon Yohan. (2024). Community ionomics reveals a diversity of mineral nutrition in a species-rich shrubland on infertile soil. Journal of Vegetation Science, 35 (5), p. e13301 [12 p.]. ISSN 1100-9233.
Identifiant IRD : fdi:010091291 -
Horton D. M., Feleke Y., Pasquet Rémy, Javadi F., Melville K. A., Delgado-Salinas A., Thulin M., Mithen R. F., Gepts P., Egan A. N. (2024). Phylogenetic systematics of Vigna sensu stricto in the context of Physostigma and allies. American Journal of Botany, [Early access], p. [20 p.]. ISSN 0002-9122.
Identifiant IRD : fdi:010091189 -
Horvath R., Minadakis N., Bourgeois Yann, Roulin A. C. (2024). The evolution of transposable elements in Brachypodium distachyon is governed by purifying selection, while neutral and adaptive processes play a minor role. eLife, 12, p. RP93284 [28 p.]. ISSN 2050-084X.
Identifiant IRD : fdi:010090525 -
Ivorra S., Tengberg M., Bonhomme V., Kaczmarek T., Pastor T., Terral J. F., Gros-Balthazard Muriel. (2024). Leveraging the potential of charred archaeological seeds for reconstructing the history of date palm. Journal of Archaeological Science, 170, 106052 [13 p.]. ISSN 0305-4403.
Identifiant IRD : fdi:010091268 -
Kaczmarek T., van der Veen M., Ivorra S., Mattingly D., Terral J. F., Gros-Balthazard Muriel. (2024). Origins and evolution of oasis agriculture in the Sahara : evidence from morphometric analyses of archaeological date palm seeds. Holocene, 34 (3), 353-365. ISSN 0959-6836.
Identifiant IRD : fdi:010088724 -
Leclerc L., Nguyen T. H., Duval P., Mariotti V., Petitot Anne-Sophie, Orjuela J., Ogier J. C., Gaudriault S., Champion Antony, Nègre N. (2024). Early transcriptomic responses of rice leaves to herbivory by Spodoptera frugiperda. Scientific Reports - Nature, 14 (1), p. 2836 [13 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010089715 -
Leitwein M., Durif G., Delpuech E., Gagnaire P.A., Ernande B., Vandeputte M., Vergnet A., Duranton Maud, Clota F., Allal F. (2024). The fate of a polygenic phenotype within the genomic landscapes of introgression in the European seabass hybrid zone. Molecular Biology and Evolution, 41 (9), msae194 [12 p.]. ISSN 0737-4038.
Identifiant IRD : fdi:010093782 -
Lopes J. C., Fonseca L. H. M., Johnson D. M., Luebert F., Murray N., Nge F. J., Rodrigues-Vaz C., Soule Vincent, Onstein R. E., Lohmann L. G., Couvreur Thomas. (2024). Dispersal from Africa to the Neotropics was followed by multiple transitions across Neotropical biomes facilitated by frugivores. Annals of Botany, 133 (5-6), 659-676. ISSN 0305-7364.
Identifiant IRD : fdi:010088833 -
Mayanja I. K., Diepenbrock C. H., Vadez Vincent, Lei T., Bailey B. N. (2024). Practical considerations and limitations of using leaf and canopy temperature measurements as a stomatal conductance proxy : sensitivity across environmental conditions, scale, and sample size. Plant Phenomics, 6, p. 169 [17 p.]. ISSN 2643-6515.
Identifiant IRD : fdi:010090676 -
Mboujda F. M. M., Rimlinger A., Tientcheu M. L. A., Boupoya A., Moupela C., Tankou C., Duminil Jérôme, Carrière Stéphanie M.. (2024). Diversity of uses and local knowledge associated with wild african plum trees, Dacryodes edulis, among different ethnic groups in the Congo Basin. Economic Botany, 78 (3), 308-328. ISSN 0013-0001.
Identifiant IRD : fdi:010090734 -
Millet C. P., Allinne C., Vi T., Marraccini P., Verleysen L., Couderc Marie, Ruttink T., Zhang D. P., Sanchez W. S., Dubreuil Tranchant Christine, Jeune W., Poncet Valérie. (2024). Haitian coffee agroforestry systems harbor complex arabica variety mixtures and under-recognized genetic diversity. PLoS One, 19 (4), p. e0299493 [24 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010090757 -
Millet C. P., Delahaie B., Georget F., Allinne C., Solano-Sánchez W., Zhang D. P., Jeune W., Toniutti L., Poncet Valérie. (2024). Guadeloupe and Haiti's coffee genetic resources reflect the crop's regional and global history. Plants People Planet, [Early access], p. [18 p.].
Identifiant IRD : fdi:010091928 -
Minadakis N., Kaderli L., Horvath R., Bourgeois Yann, Xu W. B., Thieme M., Woods D. P., Roulin A. C. (2024). Polygenic architecture of flowering time and its relationship with local environments in the grass Brachypodium distachyon. Genetics, 227 (1), p. iyae042 [17 p.]. ISSN 0016-6731.
Identifiant IRD : fdi:010091157 -
Mira-Jover A., Graciá E., Giménez A., Fritz U., Rodríguez-Caro R. C., Bourgeois Yann. (2024). Taking advantage of reference-guided assembly in a slowly-evolving lineage : application to Testudo graeca. PLoS One, 19 (8), p. e0303408 [15 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010091223 -
Nge F. J., Chaowasku T., Damthongdee A., Wiya C., Soulé V. R. C., Rodrigues-Vaz C., Bruy David, Mariac Cédric, Chatrou L. W., Chen J. H., Choo L., Dagallier Lpmj, Erkens R. H. J., Johnson D. M., Leeratiwong C., Lobao A. Q., Lopes J. C., Martínez-Velarde M. F., Munzinger Jérôme, Murray N. A., Neo W. L., Rakotoarinivo M., Ortiz-Rodriguez A. E., Sonké B., Thomas D. C., Wieringa J. J., Couvreur Thomas. (2024). Complete genus-level phylogenomics and new subtribal classification of the pantropical plant family Annonaceae. Taxon, [Early access], p. [29 p.]. ISSN 0040-0262.
Identifiant IRD : fdi:010091927 -
Nguyen D. T., Kokas F. Z., Gonin M., Lavarenne J., Colin M., Gantet Pascal, Bergougnoux V. (2024). Transcriptional changes during crown-root development and emergence in barley (Hordeum vulgare L.). BMC Plant Biology, 24 (1), p. 438 [14 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010090705 -
Ortiz-Rodriguez A. E., Nge F. J., Rodrigues-Vaz C., Soulé V., Schatz G. E., Martínez-Velarde M. F., Hurtado-Reveles L., Rangel-Olguin M., Couvreur Thomas. (2024). Taxonomy, systematics and conservation of the highly threatened and endemic Mexican genus Tridimeris (Annonaceae). Plant Systematics and Evolution, 310 (6), p. 47 [32 p.]. ISSN 0378-2697.
Identifiant IRD : fdi:010092177 -
Pelissier P. M., Parizot B., Jia L., De Knijf A., Goossens V., Gantet Pascal, Champion Antony, Audenaert D., Xuan W., Beeckman T., Motte H. (2024). Nitrate and ammonium, the yin and yang of nitrogen uptake : a time-course transcriptomic study in rice. Frontiers in Plant Science, 15, p. 1343073 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010091340 -
Pérez-Calle V., Bellot S., Kuhnhäuser B. G., Pillon Yohan, Forest F., Leitch I. J., Baker W. J. (2024). Phylogeny, biogeography and ecological diversification of New Caledonian palms (Arecaceae). Annals of Botany, [Early access], [16 p.]. ISSN 0305-7364.
Identifiant IRD : fdi:010089732 -
Poncet Valérie, van Asten P., Millet C. P., Vaast P., Allinne C. (2024). Which diversification trajectories make coffee farming more sustainable ?. Current Opinion in Environmental Sustainability, 68, 101432 [11 p.]. ISSN 1877-3435.
Identifiant IRD : fdi:010090593 -
Pryce T. O., Pradier B., Favereau A., Oo U. S. N., Le Meur C., Oo D. K. T., Aye U. A., Win D. T. T., Langowska K. A., Hanus K., Iizuka Y., Georgon C., Zhuang Y. J., Castillo C., Fuller D., Win D. H. S., Aung Dhmk, Champion Louis, Oo U. M. M., Oo U. M. N., Phyo U. Z., Maung U. P. W., Myat D. Y. M., Zaw U. T., Paibool K. A., Domethong K. V., Willis A., Higham C. F. W., Higham T. F. G. (2024). Late prehistoric and early historic chronology of Myanmar : a four-millennia sequence from Halin. Antiquity, [Early access], p. [18 p.]. ISSN 0003-598X.
Identifiant IRD : fdi:010089514 -
Robin-Soriano A., Maurice K., Boivin S., Bourceret A., Laurent-Webb L., Youssef S., Nespoulous J., Boussière I., Berder J., Damasio C., Vincent B., Boukcim H., Ducousso M., Gros-Balthazard Muriel. (2024). Absence of Gigasporales and rarity of spores in a hot desert revealed by a multimethod approach. Mycorrhiza, 34 (4), 251-270. ISSN 0940-6360.
Identifiant IRD : fdi:010091606 -
Salojaervi J., Rambani A., Yu Z., Guyot Romain, Strickler S., Lepelley M., Wang C., Rajaraman S., Rastas P., Zheng C. F., Munoz D. S., Meidanis J., Paschoal A. R., Bawin Y., Krabbenhoft T. J., Wang Z. Q., Fleck S. J., Aussel R., Bellanger L., Charpagne A., Fournier C., Kassam M., Lefebvre G., Metairon S., Moine D., Rigoreau M., Stolte J., Hamon Perla, Couturon Emmanuel, Dubreuil Tranchant Christine, Mukherjee M., Lan T. Y., Engelhardt J., Stadler P., De Lemos S. M. C., Suzuki S. I., Sumirat U., Wai C. M., Dauchot N., Orozco-Arias S., Garavito A., Kiwuka C., Musoli P., Nalukenge A., Guichoux E., Reinout H., Smit M., Carretero-Paulet L., Guerreiro O., Braghini M. T., Padilha L., Sera G. H., Ruttink T., Henry R., Marraccini P., van de Peer Y., Andrade A., Domingues D., Giuliano G., Mueller L., Pereira L. F., Plaisance S., Poncet Valérie, Rombauts S., Sankoff D., Albert V. A., Crouzillat D., Kochko Alexandre de, Descombes P. (2024). The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars. Nature Genetics, 56 (4), p. 721-731. ISSN 1061-4036.
Identifiant IRD : fdi:010090608 -
Santacruz Endara P. G., Lozinguez Alix, Valencia R., Queenborough S. A., Endara M. J., Obando-Tello B., Couvreur Thomas. (2024). Discreet but diverse and specific : Determining plant-herbivore interactions across a species-rich plant family in a tropical rain forest. Biotropica, [Early access], p. [15 p.]. ISSN 0006-3606.
Identifiant IRD : fdi:010092023 -
Saro I., Rodríguez-Rodríguez P., Rivera D., Obón C., Aberlenc Frédérique, Díaz-Pérez A., Zehdi-Azouzi S., Curbelo L., Sosa P. A. (2024). The genetic characterization of the canarian endemic palm (Phoenix canariensis) by simple sequence repeats and chloroplast markers : a tool for the molecular traceability of Phoenix hybridization. Diversity, 16 (7), p. 411 [12 p.].
Identifiant IRD : fdi:010091154 -
Scarcelli Nora, Garcia Davila C., Couderc Marie, Castro Ruiz D., Estivals G., Custodio Angulo Chavez C.A., Acho Vasquez H., Alvarado Reategui J.G., Vizcarra Bentos T., Mariac Cédric. (2024). The complete chloroplast genome of Marupa (Simarouba amara Aubl., Simaroubaceae). Ecology and Evolution, 14 (7), e11688 [7 p.]. ISSN 2045-7758.
Identifiant IRD : fdi:010091484 -
Shimada A., Cahn J., Ernst E., Lynn J., Grimanelli Daniel, Henderson I., Kakutani T., Martienssen R. A. (2024). Retrotransposon addiction promotes centromere function via epigenetically activated small RNAs. Nature Plants, 10, p. 1304-1316 + [13 p.]. ISSN 2055-026X.
Identifiant IRD : fdi:010091286 -
Shrestha A.M.S, Gonzales M.E.M., Ong P.C.L., Larmande Pierre, Lee H.S., Jeung J.U., Kohli A., Chebotarov D., Mauleon R.P., Lee J.S., McNally K.L. (2024). RicePilaf : a post-GWAS/QTL dashboard to integrate pangenomic, coexpression, regulatory, epigenomic, ontology, pathway, and text-mining information to provide functional insights into rice QTLs and GWAS loci. GigaScience, 13, giae013 [12 p.]. ISSN 2047-217X.
Identifiant IRD : fdi:010091456 -
Streiff S. J. R., Ravomanana E. O., Rakotoarinivo M., Pignal M., Pimparé E. P., Erkens R. H. J., Couvreur Thomas. (2024). High-quality herbarium-label transcription by citizen scientists improves taxonomic and spatial representation of the tropical plant family Annonaceae. Adansonia, 46 (18), p. 173-185. ISSN 1280-8571.
Identifiant IRD : fdi:010092230 -
Thiaw M. R. N., Gantet Pascal. (2024). The emerging functions of mini zinc finger (MIF) microproteins in seed plants : a minireview. Biochimie, 218, p. 69-75. ISSN 0300-9084.
Identifiant IRD : fdi:010088791 -
Tournebize Rémi, Chikhi L. (2024). Ignoring population structure in hominin evolutionary models can lead to the inference of spurious admixture events. Nature Ecology and Evolution, [Early access], p. [12 p.]. ISSN 2397-334X.
Identifiant IRD : fdi:010092236 -
Tran H. L., Hoang G. T., Phung N. T. P., Le H. H., Grondin Alexandre, Gantet Pascal. (2024). Quantitative trait loci for grain mineral element accumulation in Vietnamese rice landraces. PLoS One, 19 (12), p. e0315666 [18 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010092663 -
Vadez Vincent, Grondin Alexandre, Chenu K., Henry A., Laplaze Laurent, Millet E. J., Carminati A. (2024). Crop traits and production under drought [+ Correction, 1 p.]. Nature Reviews Earth and Environment, 5 (3), 211-225 [+ Correction, 1 p. , 2025].
Identifiant IRD : fdi:010089508 -
Vega J. M., Podio M., Orjuela J., Siena L. A., Pessino S. C., Combes Marie-Christine, Mariac Cédric, Albertini E., Pupilli F., Ortiz J. P. A., Leblanc Olivier. (2024). Chromosome-scale genome assembly and annotation of Paspalum notatum Flüggé var. saurae. Scientific Data, 11 (1), p. 891 [12 p.].
Identifiant IRD : fdi:010091248 -
Vishwakarma R., Sgarlata G. M., Soriano-Paños D., Rasteiro R., Maié T., Paixao T., Tournebize Rémi, Chikhi L. (2024). Species-specific traits shape genetic diversity during an expansion-contraction cycle and bias demographic history reconstruction. Molecular Ecology, [Early access], p. [18 p.]. ISSN 0962-1083.
Identifiant IRD : fdi:010092193 -
White D. M., Pitman N. C. A., Feeley K. J., Rivas-Torres G., Bravo-Sánchez S., Sánchez-Parrales F., Clark J. L., Ulloa C. U., Cornejo X., Couvreur Thomas, Peñafiel M., Benavides G., Bonifaz C., Cerón J. C., Fernandez A., Fortier R. P., Navas-Muñoz D., Rojas M. V., Zapata J. N., Williams J., Guevara-Andino J. E. (2024). Refuting the hypothesis of Centinelan extinction at its place of origin. Nature Plants, [Early access], p. [18 p.]. ISSN 2055-026X.
Identifiant IRD : fdi:010091959 -
Yacoubi Ayadi N., Bernard S., Bossy R., Courtin M., Happi Happi Bill Gates, Larmande Pierre, Michel F., Nédellec C., Roussey C., Faron C. (2024). A unified approach to publish semantic annotations of agricultural documents as knowledge graphs. Smart Agricultural Technology, 8, 100484 [19 p.]. ISSN 2772-3755.
Identifiant IRD : fdi:010091616 -
Zunino L., Cubry Philippe, Sarah G., Mournet P., El Bakkali A., Aqbouch L., Sidibé-Bocs S., Costes E., Khadari B. (2024). Genomic evidence of genuine wild versus admixed olive populations evolving in the same natural environments in western Mediterranean Basin. Plos One, 19 (1), p. e0295043 [18 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010089526 -
Zuntini A.R., Carruthers T., Maurin O., Bailey P.C., Leempoel K., Brewer G.E., Epitawalage N., Françoso E., Gallego-Paramo B., McGinnie C., Negrão R., Roy S.R., Simpson L., Toledo Romero E., Barber V.M.A., Botigué L., Clarkson J.J., Cowan R.S., Dodsworth S., Johnson M.G., Kim J.T., Pokorny L., Wickett N.J., Antar G.M., DeBolt L., Gutierrez K., Hendriks K.P., Hoewener A., Hu A.Q., Joyce E.M., Kikuchi I.A.B.S., Larridon I., John de Lírio E., Liu J.X., Malakasi P., Przelomska N.A.S., Shah T., Viruel J., Allnutt T.R., Ameka G.K., Andrew R.L., Appelhans M.S., Arista M., Ariza M.J., Arroyo J., Arthan W., Bachelier J.B., Donovan Bailey C., Barnes H.F., Barrett M.D., Barrett R.L., Bayer R.J., Bayly M.J., Biffin E., Biggs N., Birch J.L., Bogarín D., Borosova R., Bowles A.M.C., Boyce P.C., Bramley G.L.C., Briggs M., Broadhurst L., Brown G.K., Bruhl J.J., Bruneau A., Buerki S., Burns E., Byrne M., Cable S., Calladine A., Callmander M.W., Cano A., Cantrill D.J., Cardinal-McTeague W.M., Carlsen M.M., Carruthers A.J.A., De Castro Mateo A., Chase M.W., Chatrou L.W., Cheek M., Chen S., Christenhusz M.J.M., Christin P.A., Clements M.A., Coffey S.C., Conran J.G., Cornejo X., Couvreur Thomas, Cowie I.D., Csiba L., Darbyshire I., Davidse G., Davies N.M.J., Davis A.P., Van Dijk K., Downie S.R., Duretto M.F., Duvall M.R., Edwards S.L., Eggli U., Erkens R.H.J., Escudero M., De La Estrella M., Fabriano F., Fay M.F., Ferreira P.D.L., Ficinski S.Z., Fowler R.M., Frisby S., Fu L., Fulcher T., Galbany-Casals M., Gardner E.M., German D.A., Giaretta A., Giberneau M., Gillespie L.J., González C.C., Goyder D.J., Graham S.W., Grall A., Green L., Gunn B.F., Gutiérrez D.G., Hackel J., Haevermans T., Haigh A., Hall J.C., Hall T., Harrison M.J., Hatt S.A., Hildago O., Hodkinson T.R., Holmes G.D., Hopkins H.C.F., Jackson C.J., James S.A., Jobson R.W., Kadereit G., Kahandawala I.M., Kainulainen K., Kato M., Kellogg E.A., King G.J., Klejevskaja B., Klitgaard B.B., Klopper R.R., Knapp S., Koch M.A., Leebens-Mack J.H., Lens F., Leon C.J. , Léveillé-Bourret E., Lewis G.P., Li D.Z., Liede-Schumann S., Livshultz T., Lorence D., Lu M., Lu-Irving P., Luber J., Lucas E.J., Luján M., Lum M., Macfarlane T.D., Magdalena C., Mansano V.F., Masters L.E., Mayo S.J., McColl K., McDonnell A.J., McDougall A.E., McLay T.G.B., McPherson H., Meneses R.I., Merckx V.S.F.T., Michelangeli F.A., Mitchell J.D., Monro A.K., Moore M.J., Mueller T.L., Mummenhoff K., Munzinger Jérôme, Muriel P., Murphy D.J., Nargar K., Nauheimer L., Nge F.J., Nyffeler R., Orejuela A., Ortiz E.M., Palazzesi L., Peixoto A.L., Pell S.K., Pellicer J., Penneys D.S., Perez-Escobar O.A., Persson C., Pignal M., Pillon Yohan, et. al. (2024). Phylogenomics and the rise of the angiosperms. Nature, 629 (8013), 843-850. ISSN 0028-0836.
Identifiant IRD : fdi:010091562
Articles
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Pillon Yohan, Crayn D., Streiff S.J.R., M. de Vos J. (2024). A suprageneric classification of Oxalidales. Swainsona, 38, 153-160. ISSN 2206-1649.
Identifiant IRD : fdi:010091794 -
Pillon Yohan, Hopkins H.C.F., Wajer J. (2024). A review of Stenocarpus (Proteaceae, Stenocarpinae) in New Caledonia including a new species, plus new combinations for the Australian species formerly in Strangea. Blumea : Biodiversity, Evolution and Biogeography of Plants, 69 (3), 211-219. ISSN 0006-5196.
Identifiant IRD : fdi:010092514 -
Rebollo R., Gerenton P., Cumunel E., Mary A., Sabot François, Burlet N., Gillet B., Hughes S., S. Oliveira D., Goubert C., Fablet M., Vieira C., Lacroix V. (2024). Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues. Peer Community Journal, 4, e89 [23 p.]. ISSN 2804-3871.
Identifiant IRD : fdi:010091775 -
Yao T.L., Nazre M., Duminil Jérôme, Loup C., Munzinger Jérôme. (2024). Multivariate morphometric analysis of Mangosteen (Garcinia Mangostana Var. Mangostana, Clusiaceae) and its wild relatives. Edinburgh Journal of Botany, 81, art. 2003 [25 p.]. ISSN 0960-4286.
Identifiant IRD : fdi:010087974
Chapitres ou parties d'ouvrages
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Cubry Philippe, Lorieux Mathias, Sabot François, Ghesquière Alain. (2024). Une histoire de la génomique des riz cultivés. In :
Pelletier G. (ed.). Génétique des domestications. Londres : ISTE, 183-197. (Biologie : Génétique, Epigénétique). ISBN 978-1-78948-167-9.
Identifiant IRD : fdi:010092305 -
Cubry Philippe, Lorieux Mathias, Sabot François, Ghesquière Alain. (2024). A history of cultivated rice genomics. In :
Pelletier G. (ed.). Genetics of domestications. Londres : ISTE, 169-183. (Biology : Genetics, Epigenetics). ISBN 978-1-7894-5167-2.
Identifiant IRD : fdi:010093853 -
Guyot Romain, Montufar R., Mariac Cédric. (2024). Quels apports de la génétique au concept de durabilité écologique ?. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.), Fréour Claire (coord.). Science de la durabilité : comprendre, co-construire, transformer (volume 3). Marseille : IRD, 58-61. ISBN 978-2-7099-3039-0.
Identifiant IRD : fdi:010091735 -
Guyot Romain, Montufar R., Mariac Cédric. (2024). What can genetics bring to the concept of ecological sustainability ?. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.), Fréour Claire (coord.). Sustainability science : understand, co-construct, transform (volume 3). Marseille : IRD, 58-61. ISBN 978-2-7099-3041-3.
Identifiant IRD : fdi:010091760 -
Hirt H., Thuwal K., Kane N.A., Laplaze Laurent. (2024). Changer de paradigme en recherche agricole pour contrer le changement climatique. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.), Fréour Claire (coord.). Science de la durabilité : comprendre, co-construire, transformer (volume 3). Marseille : IRD, 28-31. ISBN 978-2-7099-3039-0.
Identifiant IRD : fdi:010091728 -
Hirt H., Thuwal K., Kane N.A., Laplaze Laurent. (2024). A paradigm shift in agricultural research to tackle climate change. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.), Fréour Claire (coord.). Sustainability science : understand, co-construct, transform (volume 3). Marseille : IRD, 28-31. ISBN 978-2-7099-3041-3.
Identifiant IRD : fdi:010091753
Thèses, mémoires, diplômes
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Happi Happi Bill Gates. (2024). Linking complementary datasets through the augmentation of knowledge graphs and multimodal representations.
Montpellier ; Marseille : Université de Montpellier ; IRD, 211 p. multigr. Th. Informatique. Information, Structures, Systèmes, Université de Montpellier. 2024/12/09.
Identifiant IRD : fdi:010093221
2023
Articles référencés dans le Web of Science
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Adam Hélène, Gutiérrez A., Couderc Marie, Sabot François, Ntakirutimana F., Serret Julien, Orjuela J., Tregear James, Jouannic Stefan, Lorieux Mathias. (2023). Genomic introgressions from African rice (Oryza glaberrima) in Asian rice (O. sativa) lead to the identification of key QTLs for panicle architecture. BMC Genomics, 24 (1), 587 [21 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010090334 -
Adji B. I., Letort V., Wang X. J., Kang M. Z., De Reffye P., Jaeger M., Cilas C., Kouassi K. H., Duminil Jérôme, Sabatier S., Akaffou D. S. (2023). Rethinking iconic species reforestation in West Africa : seed shape harnessing is strategic for enhanced germination and vigorous growth in Khaya senegalensis and Parkia biglobosa. Forests, 14 (7), 1311 [18 p.].
Identifiant IRD : fdi:010090040 -
Alarcon-Mendez M., Maselli S., van Zonneveld M., Loo J., Snook L., Oliva A., Franco A., Duminil Jérôme. (2023). Implications of community forest management for the conservation of the genetic diversity of big-leaf mahogany (Swietenia macrophylla King, Meliaceae) in the Maya Biosphere Reserve, Pet acute accent en, Guatemala. Trees Forests and People, 11, p. 100362 [8 p.].
Identifiant IRD : fdi:010086816 -
Amimi N., Ghouil H., Zitouna-Chebbi R., Joët Thierry, Ammari Y. (2023). Intraspecific variation of Quercus ilex L. seed morphophysiological traits in Tunisia reveals a trade-off between seed germination and shoot emergence rates along a thermal gradient. Annals of Forest Science, 80 (1), p. 12 [16 p.]. ISSN 1286-4560.
Identifiant IRD : fdi:010087435 -
Antoine G., Vaissayre Virginie, Meile J. C., Payet J., Conejero G., Costet L., Fock-Bastide I., Joët Thierry, Dussert Stéphane. (2023). Diterpenes of Coffea seeds show antifungal and anti-insect activities and are transferred from the endosperm to the seedling after germination. Plant Physiology and Biochemistry, 194, 627-637. ISSN 0981-9428.
Identifiant IRD : fdi:010086947 -
Aubin E., Llauro C., Garrigue J., Mirouze Marie, Panaud O., El Baidouri M. (2023). Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants. PLoS Genetics, 19 (10), p. e1010964 [26 p.]. ISSN 1553-7404.
Identifiant IRD : fdi:010088593 -
Baurle I., Laplaze Laurent, Martin A. (2023). Preparing for an uncertain future : molecular responses of plants facing climate change. Journal of Experimental Botany, 74 (5), 1297-1302. ISSN 0022-0957.
Identifiant IRD : fdi:010086826 -
Beretta V. M., Franchini E., Din I. U., Lacchini E., van den Broeck L., Sozzani R., Orozco-Arroyo G., Caporali E., Adam Hélène, Jouannic Stefan, Gregis V., Kater M. M. (2023). The ALOG family members OsG1L1 and OsG1L2 regulate inflorescence branching in rice. Plant Journal, 115 (2), 351-368. ISSN 0960-7412.
Identifiant IRD : fdi:010087648 -
Bonnamy M., Galzi Agnès, Gorgues L., Chalvon V., Hébrard Eugénie, Chéron Sophie, Nguyen T.H., Poulicard Nils, Sabot François, Pidon H., Champion Antony, Césari S., Kroj T., Albar Laurence. (2023). Rapid evolution of an RNA virus to escape recognition by a rice nucleotide-binding and leucine-rich repeat domain immune receptor. New Phytologist, 237 (3), 900-913. ISSN 0028-646X.
Identifiant IRD : fdi:010086596 -
Bourguiba H., Hachef A., Saffar W., Chabrillange Nathalie, Aberlenc Frédérique, Cherif Emira, Zehdi-Azouzi S. (2023). Male diversity matters : genetic structuring of insular male date palm (Phoenix dactylifera L.) revealed valuable breeding and conservation resources. Journal of Horticultural Science and Biotechnology, [Early access], p. [11 p.]. ISSN 1462-0316.
Identifiant IRD : fdi:010090082 -
Brouziyne Y., El Bilali A., Epule T. E., Ongoma V., Elbeltagi A., Hallam J., Moudden F., Al-Zubi M., Vadez Vincent, McDonnell R. (2023). Towards lower greenhouse gas emissions agriculture in North Africa through climate-smart agriculture : a systematic review. Climate, 11 (7), p. 139 [14 p.].
Identifiant IRD : fdi:010088311 -
Camargo-Forero N., Orozco-Arias S., Agudelo J. M. P., Guyot Romain. (2023). HERV-K (HML-2) insertion polymorphisms in the 8q24.13 region and their potential etiological associations with acute myeloid leukemia. Archives of Virology, 168 (4), p. 125 [12 p.]. ISSN 0304-8608.
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Champion Louis, Höhn A., Neumann K., Franke G., Breunig P. (2023). A question of rite-pearl millet consumption at Nok cultures sites, Nigeria (second/first millennium BC). Vegetation History and Archaeobotany, 32 (3), 263-283. ISSN 0939-6314.
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Cissé A., Clermont Dauphin Cathy, Sall S. N., Gie S., Groupement M. P., Ndiaye A., Diouf M., Traore B., Ndir K., Kane N. A., Renard D., Violle C., Barnaud Adeline, Berthouly Cécile. (2023). Sahelian smallholders' varietal mixtures reconcile yield and agrobiodiversity conservation. Basic and Applied Ecology, 67, p. 48-60. ISSN 1439-1791.
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D'Agostini F., Ruiz-Perez J., Madella M., Vadez Vincent, Kholova J., Lancelotti C. (2023). Phytoliths as indicators of plant water availability : the case of millets cultivation in the Indus Valley civilization. Review of Palaeobotany and Palynology, 309, p. 104783 [13 p.]. ISSN 0034-6667.
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Dagallier L. P. M. J., Mbago F. M., Couderc Marie, Gaudeul M., Grall A., Loup C., Wieringa J. J., Sonké B., Couvreur Thomas. (2023). Phylogenomic inference of the African tribe Monodoreae (Annonaceae) and taxonomic revision of Dennettia, Uvariodendron and Uvariopsis. Phytokeys, (233), p. 1-200. ISSN 1314-2011.
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Dagallier L.-P. P. M. J., Condamine F. L., Couvreur Thomas. (2023). Sequential diversification with Miocene extinction and Pliocene speciation linked to mountain uplift explains the diversity of the African rain forest clade Monodoreae (Annonaceae). Annals of Botany, [Early access], [20 p.]. ISSN 0305-7364.
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de Assis R., Goncalves L. S. A., Guyot Romain, Vanzela A. L. L. (2023). Abundance of distal repetitive DNA sequences in Capsicum L. (Solanaceae) chromosomes. Genome, [Early access], p. [12 p.]. ISSN 0831-2796.
Identifiant IRD : fdi:010090075 -
Delorme-Hinoux V., Mbodj Assane, Brando S., De Bures A., Llauro C., Covato F., Garrigue J., Guisset C., Borrut J., Mirouze Marie, Reichheld J. P., Saez-Vaasquez J. (2023). 45S rDNA diversity in natura as one step towards ribosomal heterogeneity in Arabidopsis thaliana. Plants, 12 (14), p. 2722 [21 p.].
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Diop B. M., Guèye M. C., Leclerc C., Deu M., Zekraoui Leila, Calatayud C., Rivallan R., Kaly J. R., Cissé M., Piquet M., Diack O., Ngom A., Berger A., Ndoye I., Ndir K., Vigouroux Yves, Kane N. A., Barnaud Adeline, Billot C. (2023). Ethnolinguistic and genetic diversity of fonio (Digitaria exilis) in Senegal. Plants People Planet, [Early access], [15 p.].
Identifiant IRD : fdi:010090288 -
Dolinska A., Hassenforder E., Loboguerrero A. M., Sultan Benjamin, Bossuet J., Cottenceau J., Bonatti M., Hellin J., Mekki I., Drogoul Alexis, Vadez Vincent. (2023). Co-production opportunities seized and missed in decision-support frameworks for climate-change adaptation in agriculture - How do we practice the "best practice" ?. Agricultural Systems, 212, 103775 [18 p.]. ISSN 0308-521X.
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Dondjou D. T., Diedhiou A. G., Mbodj D., Mofini M. T., Pignoly S., Ndiaye C., Diedhiou I., Assigbetsé Komi, Manneh B., Laplaze Laurent, Kane A. (2023). Rice developmental stages modulate rhizosphere bacteria and archaea co-occurrence and sensitivity to long-term inorganic fertilization in a West African Sahelian agro-ecosystem. Environmental Microbiome, 18 (1), p. 42 [17 p.].
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Dubreuil Tranchant Christine, Chenal Clothilde, Blaison M., Albar Laurence, Klein V., Mariac Cédric, Wing R.A., Vigouroux Yves, Sabot François. (2023). FrangiPANe, a tool for creating a panreference using left behind reads. NAR Genomics and Bioinformatics, 5 (1), lqad013 [8 p.]. ISSN 2631-9268.
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Escobar S., Vigouroux Yves, Karubian J., Zekraoui Leila, Balslev H., Montufar R. (2023). Limited seed dispersal shapes fine-scale spatial genetic structure in a Neotropical dioecious large-seeded palm. Biotropica, 55 (1), 160-172. ISSN 0006-3606.
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Estivals G., Duponchelle Fabrice, Garcia-Davila C., Romer U., Mariac Cédric, Renno Jean-François. (2023). Exceptional genetic differentiation at a micro-geographic scale in Apistogramma agassizii (Steindachner, 1875) from the Peruvian Amazon : sympatric speciation ?. Evolutionary Biology, [Early access], [17 p.]. ISSN 0071-3260.
Identifiant IRD : fdi:010086881 -
Gain C., Rhone B., Cubry Philippe, Salazar I., Forbes F., Vigouroux Yves, Jay F., Francois O. (2023). A quantitative theory for genomic offset statistics. Molecular Biology and Evolution, 40 (6), msad140 [10 p.]. ISSN 0737-4038.
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Garin V., Choudhary S., Murugesan T., Kaliamoorthy S., Diancumba M., Hajjarpoor Amir, Chellapilla T. S., Gupta S. K., Kholova J. (2023). Characterization of the pearl millet cultivation environments in India : status and perspectives enabled by expanded data analytics and digital tools. Agronomy, 13 (6), p. 1607 [22 p.].
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Gonzalez-Garcia L. N., Lozano-Arce D., Londono J. P., Guyot Romain, Duitama J. (2023). Efficient homology-based annotation of transposable elements using minimizers. Applications in Plant Sciences, [Early access], p. [11 p.]. ISSN 2168-0450.
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Gosline G., Bidault E., van der Burgt X., Cahen D., Challen G., Conde N., Couch C., Couvreur Thomas, Dagallier Lpmj, Darbyshire I., Dawson S., Dore T. S., Goyder D., Grall A., Haba P., Haba P., Harris D., Hind D. J. N., Jongkind C., Konomou G., Larridon I., Lewis G., Ley A., Lock M., Lucas E., Magassouba S., Mayo S., Molmou D., Monro A., Onana J. M., Paiva J., Paton A., Phillips S., Prance G., Quintanar A., Rokni S., Shah T., Schrire B., Schuiteman A., Simoes A. R. G., Sosef M., Stevart T., Stone R. D., Utteridge T., Wilkin P., Xanthos M., Lughadha E. N., Cheek M. (2023). A taxonomically-verified and vouchered checklist of the vascular plants of the republic of Guinea. Scientific Data, 10 (1), p. 327 [12 p.].
Identifiant IRD : fdi:010088108 -
Gros-Balthazard Muriel, Battesti V., Flowers J. M., Ferrand S., Breil M., Ivorra S., Terral J. F., Purugganan M. D., Wing R., Mohammed N., Bourgeois Y. (2023). What lies behind a fruit crop variety name ? A case study of the barni date palm from al-'Ula oasis, Saudi Arabia. Plants People Planet, 5 (1), 82-97.
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Hirt H., Al-Babili S., Almeida-Trapp M., Martin A., Aranda M., Bartels D., Bennett M., Blilou I., Boer D., Boulouis A., Bowler C., Brunel-Muguet S., Chardon F., Colcombet J., Colot V., Daszkowska-Golec A., Dinneny J. R., Field B., Froehlich K., Gardener C. H., Gojon A., Gomes E., Gomez-Alvarez E. M., Gutierrez C., Havaux M., Hayes S., Heard E., Hodges M., Alghamdi A. K., Laplaze Laurent, Lauersen K. J., Leonhardt N., Johnson X., Jones J., Kollist H., Kopriva S., Krapp A., Masson M. L. P., McCabe M. F., Merendino L., Molina A., Ramirez J. L. M., Mueller-Roeber B., Nicolas M., Nir I., Orduna I. O., Pardo J. M., Reichheld J. P., Rodriguez P. L., Rouached H., Saad M. M., Schlogelhofer P., Singh K. A., De Smet I., Stanschewski C., Stra A., Tester M., Walsh C., Weber A. P. M., Weigel D., Wigge P., Wrzaczek M., Wulff B. B. H., Young I. M. (2023). PlantACT! : how to tackle the climate crisis. Trends in Plant Science, 28 (5), 537-543. ISSN 1360-1385.
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Kaczmarek T., Causse S., Abdul S. D., Abraham S., Achigan-Dako E. G., Adje C., Adjebeng-Danquah J., Agyare R. Y., Akanvou L., Bakasso Y., Barry M. B., Bonsu S. K., Calatayud C., Conde S., Couderc Marie, Dachi S. N., Diallo T., Diop B. M., Deu M., Gueye M. C., Yerima Arib, Issah A. R., Kane N. A., Keita Y., Kombiok J., Ngom A., Noyer J. L., Olodo K., Oselebe H. O., Pham Jean-Louis, Piquet M., Puozaa D. K., Rivallan R., Saidou S., Sekloka E., Tengey T. K., Uyoh E. A., Vancoppenolle S., Vigouroux Yves, Zekraoui Leila, Leclerc C., Barnaud Adeline, Billot C. (2023). Towards conservation and sustainable use of an indigenous crop : a large partnership network enabled the genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions. Plants People Planet, 7 (3), 621-630.
Identifiant IRD : fdi:010090209 -
Khodaeiaminjan M., Knoch D., Thiaw M. R. N., Marchetti C. F., Korinkova N., Techer A., Nguyen T. D., Chu J. T., Bertholomey V., Doridant I., Gantet Pascal, Graner A., Neumann K., Bergougnoux V. (2023). Genome-wide association study in two-row spring barley landraces identifies QTL associated with plantlets root system architecture traits in well-watered and osmotic stress conditions. Frontiers in Plant Science, 14, p. 1125672 [19 p.]. ISSN 1664-462X.
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Kiwuka C., Vos J., Douma J. C., Musoli P., Mulumba J. W., Poncet Valérie, Anten N. P. R. (2023). Intraspecific variation in growth response to drought stress across geographic locations and genetic groups in Coffea canephora. Ecology and Evolution, 13 (1), p. e9715 [17 p.]. ISSN 2045-7758.
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Kucko A., Alché J. D., Tranbarger Timothy, Wilmowicz E. (2023). Abscisic acid- and ethylene-induced abscission of yellow lupine flowers is mediated by jasmonates. Journal of Plant Physiology, 290, p. 154119 [8 p.]. ISSN 0176-1617.
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Kusuma J., Couderc Marie, Scarcelli Nora, Duminil Jérôme. (2023). Complete chloroplast genome of two nutmeg species, Myristica argentea Warb. 1891 and Myristica fatua Houtt. 1774 (Myristicaceae). Mitochondrial DNA Part B : Resources, 8 (7), p. 751-755.
Identifiant IRD : fdi:010088301 -
Lee S. C., Adams D. W., Ipsaro J. J., Cahn J., Lynn J., Kim H. S., Berube B., Major V., Calarco J. P., Leblanc C., Bhattacharjee S., Ramu U., Grimanelli Daniel, Jacob Y., Voigt P., Joshua-Tor L., Martienssen R. A. (2023). Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation. Cell, 186 (19), p. 4100-4116. ISSN 0092-8674.
Identifiant IRD : fdi:010088959 -
Lemoine T., Rimlinger A., Duminil Jérôme, Leclerc C., Labeyrie V., Tsogo M., Carrière Stéphanie M.. (2023). Untangling biocultural and socioeconomical drivers of African plum tree (Dacryodes edulis) local nomenclature along a rural-urban gradient in Central Cameroon. Human Ecology, 51, 721-736. ISSN 0300-7839.
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Lozano-Arce D., Garcia T., Gonzalez-Garcia L. N., Guyot Romain, Chacon-Sanchez M. I., Duitama J. (2023). Selection signatures and population dynamics of transposable elements in lima bean. Communications Biology, 6 (1), p. 803 [13 p.].
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Martinez-Velarde M. F., Rodrigues-Vaz C., Soule Vincent, Nge F. J., Schatz G. E., Couvreur Thomas, Ortiz-Rodriguez A. E. (2023). Desmopsis terriflora, an extraordinary new species of Annonaceae with flagelliflory. Phytokeys, (227), p. 181-198. ISSN 1314-2011.
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Matra D. D., Adrian M., Karmanah, Kusuma J., Duminil Jérôme, Sobir, Poerwanto R. (2023). Dataset from de novo transcriptome assembly of Myristica fatua leaves using MinION nanopore sequencer. Data in Brief, 46, p. 108838 [6 p.]. ISSN 2352-3409.
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Minadakis N., Williams H., Horvath R., Cakovic D., Stritt C., Thieme M., Bourgeois Yann, Roulin A. C. (2023). The demographic history of the wild crop relative Brachypodium distachyon is shaped by distinct past and present ecological niches. PEER Community Journal, 3, p. e84 [19 p.].
Identifiant IRD : fdi:010092243 -
Mohamed M., Sabot François, Varoqui M., Mugat B., Audouin K., Pelisson A., Fiston-Lavier A. S., Chambeyron S. (2023). TrEMOLO : accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches. Genome Biology, 24 (1), 63 [20 p.]. ISSN 1474-760X.
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Moissiard G., Mirouze Marie, Carles C. C., Vitte C. (2023). Plant epigenetics and chromatin dynamics - EPIPLANT 2021-2022. Frontiers in Plant Science, 14, p. 1260391 [2 p.]. ISSN 1664-462X.
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Ndecky S., Nguyen T. H., Eiche E., Cognat V., Pflieger D., Pawar N., Betting F., Saha S., Champion Antony, Riemann M., Heitz T. (2023). Jasmonate signaling controls negative and positive effectors of salt stress tolerance in rice. Journal of Experimental Botany, 74 (10), 3220-3239. ISSN 0022-0957.
Identifiant IRD : fdi:010087503 -
Nguyen H. T., Cheaib M., Fournel Marie, Rios Maelle, Gantet Pascal, Laplaze Laurent, Guyomarc'h S., Riemann M., Heitz T., Petitot Anne-Sophie, Champion Antony. (2023). Genetic analysis of the rice jasmonate receptors reveals specialized functions for OsCOI2. Plos One, 18 (9), p. e0291385 [11 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010088674 -
Ntakirutimana F., Dubreuil Tranchant Christine, Cubry Philippe, Chougule K., Zhang J. W., Wing R. A., Adam Hélène, Lorieux Mathias, Jouannic Stefan. (2023). Genome-wide association analysis identifies natural allelic variants associated with panicle architecture variation in African rice, Oryza glaberrima Steud. G3 - Genes Genomes Genetics, [Early access], p. [21 p.]. ISSN 2160-1836.
Identifiant IRD : fdi:010090192 -
Orozco-Arias S., Dupeyron M., Gutierrez-Duque D., Tabares-Soto R., Guyot Romain. (2023). High nucleotide similarity of three Copia lineage LTR retrotransposons among plant genomes. Genome, 66, p. 51-61. ISSN 0831-2796.
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Orozco-Arias S., Lopez-Murillo L. H., Candamil-Cortes M. S., Arias M., Jaimes P. A., Paschoal A. R., Tabares-Soto R., Isaza G., Guyot Romain. (2023). Inpactor2 : a software based on deep learning to identify and classify LTR-retrotransposons in plant genomes. Briefings in Bioinformatics, p. [10 p.]. ISSN 1467-5463.
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Orozco-Arias S., Lopez-Murillo L. H., Piña J. S., Valencia-Castrillon E., Tabares-Soto R., Castillo-Ossa L., Isaza G., Guyot Romain. (2023). Genomic object detection : an improved approach for transposable elements detection and classification using convolutional neural networks. Plos One, 18 (9), p. e0291925 [23 p.]. ISSN 1932-6203.
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Ouedraogo Ines, Lartaud M., Baroux C., Mosca G., Delgado L., Leblanc O., Verdeil J. L., Conejero G., Autran Daphné. (2023). 3D cellular morphometrics of ovule primordium development in Zea mays reveal differential division and growth dynamics specifying megaspore mother cell singleness. Frontiers in Plant Science, 14, p. 1174171 [17 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010088051 -
Penuela M., Riccio-Rengifo C., Finke J., Rocha C., Gkanogiannis A., Wing R. A., Lorieux Mathias. (2023). Prediction of crossover recombination using parental genomes. PLoS One, 18 (2), p. e0281804 [21 p.]. ISSN 1932-6203.
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Persson C., Eriksen B., Perez A. J., Zapata J. N., Couvreur Thomas, Sklenar P. (2023). Three new species of Valeriana (Valerianoideae, Caprifoliaceae) from southern Ecuador. Phytotaxa, 579 (1), p. 47-53. ISSN 1179-3155.
Identifiant IRD : fdi:010090201 -
Peticca A., Fodil M., Gateau H., Mouget J.L., Sabot François, Chenais B., Casse N. (2023). Complete mitochondrial genome and draft chloroplastic genome of Haslea ostrearia (Simonsen 1974). Mitochondrial DNA Part B : Resources, 8 (10), 1092-1096. ISSN 2380-2359.
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Pina J. S., Orozco-Arias S., Tobon-Orozco N., Camargo-Forero L., Tabares-Soto R., Guyot Romain. (2023). G-SAIP : graphical sequence alignment through parallel programming in the post-genomic era. Evolutionary Bioinformatics, 19, p. 11769343221150585 [10 p.]. ISSN 1176-9343.
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Quenum A. J. C., Pasquet Rémy, Bodian A., Fonceka D., Djiboune Y. R., Cisse N., Mbaye M. S., Diouf D. (2023). Molecular characterization of cowpea [Vigna unguiculata (L.) Walp.] subspecies with SSR markers. Genetic Resources and Crop Evolution, [Early access], p. [9 p.]. ISSN 0925-9864.
Identifiant IRD : fdi:010090232 -
Reifová R., Ament-Velásquez S. L., Bourgeois Yann, Coughlan J., Kulmuni J., Lipinska A. P., Okude G., Stevison L., Yoshida K., Kitano J. (2023). Mechanisms of intrinsic postzygotic isolation : from traditional genic and chromosomal views to genomic and epigenetic perspectives. Cold Spring Harbor Perspectives in Biology, 15 (10), p. a041607 [ p.]. ISSN 1943-0264.
Identifiant IRD : PAR00026654 -
Rimlinger A., Duminil Jérôme, Avana-Tientcheu M. L., Carrière Stéphanie M.. (2023). Can seed exchange networks explain the morphological and genetic diversity in perennial crop species ? The case of the tropical fruit tree Dacryodes edulis in rural and urban Cameroon. Plants People Planet, [Early access], p. [16 p.].
Identifiant IRD : fdi:010088739 -
Robson J. K., Ferguson J. N., McAusland L., Atkinson J. A., Dubreuil Tranchant Christine, Cubry P., Sabot François, Wells D. M., Price A. H., Wilson Z. A., Murchie E. H. (2023). Chlorophyll fluorescence-based high-throughput phenotyping facilitates the genetic dissection of photosynthetic heat tolerance in African (Oryza glaberrima) and Asian (Oryza sativa) rice. Journal of Experimental Botany, 74 (17), 5181-5197. ISSN 0022-0957.
Identifiant IRD : fdi:010088266 -
Romero-Estévez D., Vaissayre Virginie, Morcillo F., Montúfar R., Dussert Stéphane. (2023). Exploring fruit lipid diversity in a neglected group of tropical palms : the tribe Phytelepheae. JSFA Reports, 3 (11), p. 549-560. ISSN 2573-5098.
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Salson M., Orjuela J., Mariac Cédric, Zekraoui Leila, Couderc Marie, Arribat S., Rodde N., Faye A., Kane N. A., Dubreuil Tranchant Christine, Vigouroux Yves, Berthouly Cécile. (2023). An improved assembly of the pearl millet reference genome using Oxford Nanopore long reads and optical mapping. G3 : Genes Genomes Genetics, 13 (5), jkad051 [7 p.]. ISSN 2160-1836.
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Schatz G. E., Ortiz-Rodriguez A. E., Martínez-Velarde M. F., Couvreur Thomas. (2023). New combinations and new names in Desmopsis (Annonaceae). Novon, 31 (1), p. 266-268. ISSN 1055-3177.
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Sedah P., Djedatin L. G., Loko L. Y. E., Ewedje Eebk, Orobiyi A., Gbemavo Cdsj, Toffa J., Tchakpa C., Cubry Philippe, Sabot François. (2023). Impact of seed origin and genetic drift of improved rice variety IR841 in Benin. Rice, 16 (1), p. 48 [8 p.]. ISSN 1939-8425.
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Sedah P., Djedatin L. G., Loko L. Y. E., Gbemavo Cdsj, Orobiyi A., Toffa J., Tchakpa C., Ewedje Eebk, Sabot François. (2023). Agro-morphological and structural diversity of rice germplasm revealed by SSR markers in Benin Republic. Molecular Biology Reports, 50, p. 10207-10217. ISSN 0301-4851.
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Siena L. A., Michaud Caroline, Selles Benjamin, Vega J. M., Pessino S. C., Ingouff M., Ortiz J. P. A., Leblanc Olivier. (2023). TRIMETHYLGUANOSINE SYNTHASE1 mutations decanalize female germline development in Arabidopsis. New Phytologist, [Early access], p. [16 p.]. ISSN 0028-646X.
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Silva A., Montoya M. E., Quintero C., Cuasquer J., Tohme J., Graterol E., Cruz M., Lorieux Mathias. (2023). Genetic bases of resistance to the rice hoja blanca disease deciphered by a quantitative trait locus approach. G3 : Genes Genomes Genetics, 13 (12), p. jkad223 [15 p.]. ISSN 2160-1836.
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Tenaillon M. I., Burban E., Huynh Stella, Wojcik A., Thuillet Anne-Céline, Manicacci D., Gerard P. R., Alix K., Belcram H., Cornille A., Brault M., Stevens R., Lagnel J., Dogimont C., Vigouroux Yves, Glemin S. (2023). Crop domestication as a step toward reproductive isolation. American Journal of Botany, 110 (7), e16173 [5 p.]. ISSN 0002-9122.
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Tovar-Aguilar A., Grimanelli Daniel, Acosta-García G., Vielle-Calzada J. P., Badillo-Corona J. A., Durán-Figueroa N. (2023). The miRNA822 loaded by ARGONAUTE9 modulates the monosporic female gametogenesis in Arabidopsis thaliana. Plant Reproduction, [Early access], p. [16 p.]. ISSN 2194-7953.
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Vadez Vincent, Messina C. D., Carminati A. (2023). Combatting drought : a multi-dimensional challenge. Journal of Experimental Botany, 74 (16), p. 4765-4769. ISSN 0022-0957.
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Vadez Vincent, Pilloni Raphael, Grondin Alexandre, Hajjarpoor Amir, Belhouchette H., Brouziyne Y., Chehbouni Abdelghani, Kharrou M. H., Zitouna-Chebbi R., Mekki I., Molenat J., Jacob Frédéric, Bossuet J. (2023). Water use efficiency across scales : from genes to landscapes. Journal of Experimental Botany, 74 (16), 4770-4788. ISSN 0022-0957.
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Verleysen L., Bollen R., Kambale J. L., Ebele T., Katshela B. N., Depecker J., Poncet Valérie, Assumani D. M., Vandelook F., Stoffelen P., Honnay O., Ruttink T. (2023). Characterization of the genetic composition and establishment of a core collection for the INERA Robusta coffee (Coffea canephora) field genebank from the Democratic Republic of Congo. Frontiers in Sustainable Food Systems, 7, p. 1239442 [17 p.].
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Verstraete B., Janssens S., De Block P., Asselman P., Mendez G., Ly S., Hamon Perla, Guyot Romain. (2023). Metagenomics of African Empogona and Tricalysia (Rubiaceae) reveals the presence of leaf endophytes. PeerJ, 11, p. 20e15778 [20 p.]. ISSN 2167-8359.
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Vi T., Vigouroux Yves, Cubry Philippe, Marraccini P., Phan H., Khong G. N., Poncet Valérie. (2023). Genome-wide admixture mapping identifies wild ancestry-of-origin segments in cultivated robusta coffee. Genome Biology and Evolution, 15 (5), p. evad065 [12 p.]. ISSN 1759-6653.
Identifiant IRD : fdi:010087728 -
Voichek Y., Hurieva B., Michaud Caroline, Schmücker A., Vergara Z., Desvoyes B., Gutierrez C., Nizhynska V., Jaegle B., Borg M., Berger F., Nordborg M., Ingouff M. (2023). Cell cycle status of male and female gametes during Arabidopsis reproduction. Plant Physiology, [Early access], p. [10 p.]. ISSN 0032-0889.
Identifiant IRD : fdi:010089654 -
Yao T. L., Nazre M., McKey D., Jalonen R., Duminil Jérôme. (2023). The origin of cultivated mangosteen (Garcinia mangostana L. var. mangostana) : critical assessments and an evolutionary-ecological perspective. Ecology and Evolution, 13 (3), p. e9792 [17 p.]. ISSN 2045-7758.
Identifiant IRD : fdi:010087526 -
Yogom B. T., Avana-Tientcheu M. L., Monthe F. K., Bissiengou P., Loumeto J. J., Zekraoui Leila, Hervouet C., Fonkou T., Mariac Cédric, Duminil Jérôme. (2023). Genetic diversity and structure in wild and cultivated populations of an emblematic African tree species, Garcinia kola (Clusiaceae). Tree Genetics and Genomes, 19 (5), 39 [14 p.]. ISSN 1614-2942.
Identifiant IRD : fdi:010090109 -
Zhang P., Mbodj Assane, Soundiramourtty A., Llauro C., Ghesquière Alain, Ingouff M., Slotkin R.K., Pontvianne F., Catoni M., Mirouze Marie. (2023). Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants. Nature Communications, 14, 5236 [11 p.]. ISSN 2041-1723.
Identifiant IRD : fdi:010088480 -
Zhou Y., Yu Z. C., Chebotarov D., Chougule K., Lu Z. Y., Rivera L. F., Kathiresan N., Al-Bader N., Mohammed N., Alsantely A., Mussurova S., Santos J., Thimma M., Troukhan M., Fornasiero A., Green C. D., Copetti D., Kudrna D., Llaca V., Lorieux Mathias, Zuccolo A., Ware D., McNally K., Zhang J. W., Wing R. A. (2023). Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice. Nature Communications, 14 (1), p. 1567 [14 p.].
Identifiant IRD : fdi:010088302
Articles
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Ollier C., Champion Louis, Rasse M., Mayor A. (2023). "Ce sont les femmes qui savent" : l'expertise agroécologique des rizicultrices à l'aune des changements environnementaux globaux en Basse-Casamance (Sénégal). In :
Crenn C. (ed.), Gobatto I. (ed.), Ndiaye A. (ed.), Tibère Laurence (ed.), Seye M. (ed.), Ka A. (ed.). Les Afriques de l'alimentation : environnement, santé et créativité au coeur des changements globaux contemporains. Anthropology of Food, 17, en ligne [26 p.]. ISSN 1609-9168.
Identifiant IRD : fdi:010087275 -
Benti T., Gebre E., Tesfaye K., Berecha G., Lashermes Philippe, Kyallo M., Yao N.K. (2023). Genetic diversity of ex-situ conserved Arabica cofee (Coffea arabica L.) accessions in Ethiopia as revealed by simple sequence repeats markers. Pelita Perkebunan : a Coffee and Cocoa Research Journal, 39 (2), 79-94. ISSN 0215-0212.
Identifiant IRD : fdi:010091572
Directions d'ouvrages ou de revues
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Couvet D. (ed.), Delavaud A. (ed.), Langridge J. (ed.), Soubelet H. (ed.), Abbadie L., Albert C., Argillier C., Barnaud Adeline, Barot Sébastien, Barthélémy D., Bazile D., Besnard A., Billet P., Boisvert V., Bonzom J.M., Boudet C., Claudet J., Courchamp F., Crasquin S., Deuffic P., Dupouey J.L., Gaba S., Garrido F., Giron D., Goulletquer P., Grandcolas P., Grenouillet G., Hedde M., Hellal J., Jactel H., Kefi S., Kergoat G., Klein E., Le Gall L., Leboulanger Christophe, Maron P.A., Mazé C., Morin X., Petit-Michaut S., Peyrard N., Plantegenest M., Roche Benjamin, Ronce O., Rousset F., Sainteny G., Sarrazin F., Scemama P., Tixier-Boichard M., Wincker P., Young J., Zeppilli D. (2023). Prospective scientifique pour la recherche française sur la biodiversité - 2023.
Paris : Fondation pour la Recherche sur la Biodiversité, 50 p. ISBN 979-10-91015-66-0.
Identifiant IRD : fdi:010091441
Ouvrages
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Battesti V., Gros-Balthazard Muriel. (2023). Ethnographic, genetic, and morphometric analyses of the date palm agrobiodiversity in al-'Ula oasis [third year report].
Paris ; Marseille ; Abou Dhabi : CNRS ; IRD ; NYU, 29 p. multigr.
Identifiant IRD : fdi:010091551 -
Battesti V., Gros-Balthazard Muriel. (2023). Ethnographic, genetic, and morphometric analyses of the date palm agrobiodiversity in al-'Ula oasis [fourth year report].
Paris ; Marseille ; Abou Dhabi : CNRS ; IRD ; NYU, 42 p. multigr.
Identifiant IRD : fdi:010091553 -
Cot Michel, Emperaire Laure, Henry Isabelle, Laplaze Laurent, Roubaud François, Sylvestre Florence, Thirion Ghislaine, Vidal Laurent, Zucker Jean-Daniel. (2023). Guia metodologica Miriades : analisis multidimensional del impacto de la investigacion y sus innovaciones en el desarrollo de las sociedades del Sur.
Marseille : IRD, 53 p. (Chemins d'Impacts). ISBN 978-2-7099-3021-5.
Identifiant IRD : fdi:010089162 -
Cot Michel, Emperaire Laure, Henry Isabelle, Laplaze Laurent, Roubaud François, Sylvestre Florence, Thirion Ghislaine, Vidal Laurent, Zucker Jean-Daniel. (2023). Guide méthodologique Miriades : analyse multidimensionnelle des impacts de la recherche et de ses innovations sur le développement des sociétés du Sud.
Marseille : IRD, 53 p. (Chemins d'Impacts). ISBN 978-2-7099-3019-2.
Identifiant IRD : fdi:010089163 -
Cot Michel, Emperaire Laure, Henry Isabelle, Laplaze Laurent, Roubaud François, Sylvestre Florence, Thirion Ghislaine, Vidal Laurent, Zucker Jean-Daniel. (2023). Miriades methodology guide : multidimensional impact analysis of research and resulting innovation on development in the global South.
Marseille : IRD, 53 p. (Chemins d'Impacts). ISBN 978-2-7099-3020-8.
Identifiant IRD : fdi:010089165
Chapitres ou parties d'ouvrages
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Barnaud Adeline, Berthouly Cécile, Pham Jean-Louis, Vigouroux Yves, Jankowski F. (2023). Agrobiodiversity and sustainability : a collaborative approach. In :
Dangles Olivier (coord.), Fréour Claire (coord.). Sustainability science : understand, co-construct, transform (volume 1). Marseille : IRD, 80-83.
Identifiant IRD : fdi:010087913 -
Dos Santos Stéphanie, Aholou C., Bon Bérénice, Cartier S., Cornou Cécile, Dotsou Y.M., Duminil Jérôme, Feltran G., Gate R., Gurgel H., Hechmi A., Léon J.F., Mardonez V., Marseault L., Mendy A., Onguene R., Paturel Jean-Emmanuel, Permanadeli R., Saadi Y., Sierra A., Valette Valentin, Valittutto I., Zérah Marie-Hélène. (2023). Le terrain partagé : lieu fécond pour des recherches interdisciplinaires sur les villes des Suds. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.). Science de la durabilité : comprendre, co-construire, transformer (volume 2). Marseille : IRD, 96-99. ISBN 978-2-7099-2979-0.
Identifiant IRD : fdi:010087951 -
Dos Santos Stéphanie, Aholou C., Bon Bérénice, Cartier S., Cornou Cécile, Dotsou Y.M., Duminil Jérôme, Feltran G., Gate R., Gurgel H., Hechmi A., Léon J.F., Mardonez V., Marseault L., Mendy A., Onguene R., Paturel Jean-Emmanuel, Permanadeli R., Saadi Y., Sierra A., Valette Valentin, Valittutto I., Zérah Marie-Hélène. (2023). A shared fieldwork area : fertile ground for interdisciplinary research into cities in the Global South. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.). Sustainability science : understand, co-construct, transform (volume 2). Marseille : IRD, 100-103. ISBN 978-2-7099-3003-1.
Identifiant IRD : fdi:010088533 -
Kucko A., Tranbarger Timothy, Alché J.D., Wilmowicz E. (2023). Ethylene as a multitasking regulator of abscission processes. In :
Singh S. (ed.), Husain T. (ed.), Pratap Singh V. (ed.), Kumar Tripathi D. (ed.), Mohan Prasad S. (ed.), Kishore Dubey N. (ed.). Ethylene in plant biology. Hoboken : Wiley, 49-81. ISBN 9781119744689.
Identifiant IRD : fdi:010094587 -
Labadie Michel, Desconnets Jean-Christophe, Sabot François. (2023). Digital data and sustainability. In :
Dangles Olivier (coord.), Fréour Claire (coord.). Sustainability science : understand, co-construct, transform (volume 1). Marseille : IRD, 150-153.
Identifiant IRD : fdi:010087928 -
Sabrié Marie-Lise, Catherine Hugo, Aventurier Pascal, Desconnets Jean-Christophe, Sabot François. (2023). Pas de science de la durabilité sans science ouverte. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.). Science de la durabilité : comprendre, co-construire, transformer (volume 2). Marseille : IRD, 190-193. ISBN 978-2-7099-2979-0.
Identifiant IRD : fdi:010087969 -
Sabrié Marie-Lise, Catherine Hugo, Aventurier Pascal, Desconnets Jean-Christophe, Sabot François. (2023). No sustainability science without open science. In :
Dangles Olivier (coord.), Sabrié Marie-Lise (coord.). Sustainability science : understand, co-construct, transform (volume 2). Marseille : IRD, 194-197. ISBN 978-2-7099-3003-1.
Identifiant IRD : fdi:010088551 -
Vi T., Marraccini P., Kochko Alexandre de, Cubry Philippe, Ngan Giang Khong, Poncet Valérie. (2023). Sequencing-based molecular markers for wild and cultivated coffee diversity exploration and crop improvement. In :
Ramakrishna A. (ed.), Giridhar P. (ed.), Jeszka-Skowron M. (ed.). Coffee science : biotechnological advances, economics, and health benefits. Boca Raton ; New York ; Abingdon : CRC Press, 213-219. ISBN 978-0-367-48843-7.
Identifiant IRD : fdi:010087093
2022
Articles référencés dans le Web of Science
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Acosta M. C. B., Montufar R., Guyot Romain, Mariac Cédric, Tranbarger Timothy, Restrepo S., Couvreur Thomas. (2022). Bactris gasipaes Kunth var. gasipaes complete plastome and phylogenetic analysis. Mitochondrial DNA Part B : Resources, 7 (8), 1540-1544.
Identifiant IRD : fdi:010086003 -
Affortit P., Effa-Effa B., Ndoye M. S., Moukouanga Daniel, Luchaire N., Cabrera-Bosquet L., Peralvarez M., Pilloni Raphael, Welcker C., Champion Antony, Gantet Pascal, Diedhiou A. G., Manneh B., Aroca R., Vadez Vincent, Laplaze Laurent, Cubry Philippe, Grondin Alexandre. (2022). Physiological and genetic control of transpiration efficiency in African rice, Oryza glaberrima Steud. Journal of Experimental Botany, [Early access], [15 p.]. ISSN 0022-0957.
Identifiant IRD : fdi:010085227 -
Amoussoul B. E. N., Idohou R., Kakai R. G., Dauby Gilles, Couvreur Thomas. (2022). Impact of end-of-century climate change on priority non-timber forest product species across tropical Africa. African Journal of Ecology, [Early access], [13 p.]. ISSN 0141-6707.
Identifiant IRD : fdi:010085345 -
Aubert J., Bellegarde F., Oltehua-Lopez O., Leblanc Olivier, Arteaga-Vazquez M. A., Martienssen R. A., Grimanelli Daniel. (2022). AGO104 is a RdDM effector of paramutation at the maize b1 locus. PLoS One, 17 (8), e0273695 [15 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010087458 -
Bellande Kevin, Trinh D. C., Gonzalez A. A., Dubois E., Petitot Anne-Sophie, Lucas Mikaël, Champion Antony, Gantet Pascal, Laplaze Laurent, Guyomarc'h S. (2022). PUCHI represses early meristem formation in developing lateral roots of Arabidopsis thaliana. Journal of Experimental Botany, 73 (11), 3496-3510. ISSN 0022-0957.
Identifiant IRD : fdi:010084681 -
Boursiac Y., Pradal C., Bauget F., Lucas Mikaël, Delivorias S., Godin C., Maurel C. (2022). Phenotyping and modeling of root hydraulic architecture reveal critical determinants of axial water transport. Plant Physiology, [Early acces], p. [18 p.]. ISSN 0032-0889.
Identifiant IRD : fdi:010085289 -
Budzinski I. G. F., Camargo P. O., Lemos S. M. C., Guyot Romain, Calzado N. F., Ivamoto-Suzuki S. T., Domingues D. S. (2022). Transcriptomic alterations in roots of two contrasting Coffea arabica cultivars after hexanoic acid priming. Frontiers in Genetics, 13, p. 925811 [5 p.].
Identifiant IRD : fdi:010086461 -
Burridge J. D., Grondin Alexandre, Vadez Vincent. (2022). Optimizing crop water use for drought and climate change adaptation requires a multi-scale approach. Frontiers in Plant Science, 13, p. 824720 [14 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010085120 -
Canto C. D., Diouf M. N., Ndour Papa Mamadou Sitor, Debieu Marilyne, Grondin Alexandre, Passot S., Champion Antony, Barrachina C., Pratlong M., Gantet Pascal, Assigbetsé Komi, Kane N., Cubry Philippe, Diedhiou A. G., Heulin T., Achouak W., Vigouroux Yves, Cournac Laurent, Laplaze Laurent. (2022). Genetic control of rhizosheath formation in pearl millet. Scientific Reports - Nature, 12 (1), 9205 [13 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010085249 -
Cassamo C. T., Mangueze A. V. J., Leitao A. E., Pais I. P., Moreira R., Campa Claudine, Chiulele R., Reis F. O., Marques I., Scotti-Campos P., Lidon F. C., Partelli F. L., Ribeiro-Barros A. I., Ramalho J. C. (2022). Shade and altitude implications on the physical and chemical attributes of green coffee beans from Gorongosa Mountain, Mozambique. Agronomy, 12 (10), p. 2540 [20 p.].
Identifiant IRD : fdi:010086414 -
Cintra L. A., de Souza T. B., Parteka L. M., Barreto L. M., Pereira L. F. P., Gaeta M. L., Guyot Romain, Vanzela A. L. L. (2022). An 82 bp tandem repeat family typical of 3 ' non-coding end of Gypsy/TAT LTR retrotransposons is conserved in Coffea spp. pericentromeres. Genome, 65 (3), p. 137-151. ISSN 0831-2796.
Identifiant IRD : fdi:010084504 -
Colono C. M., Podio M., Siena L. A., Ortiz J. P. A., Leblanc Olivier, Pessino S. C. (2022). Spotting the targets of the apospory controller TGS1 in Paspalum notatum. Plants, 11 (15), 1929 [19 p.].
Identifiant IRD : fdi:010085989 -
Combes Marie-Christine, Joët Thierry, Stavrinides A. K., Lashermes Philippe. (2022). New cup out of old coffee : contribution of parental gene expression legacy to phenotypic novelty in coffee beans of the allopolyploid Coffea arabica L. Annals of Botany, [Early access], p. [14 p.]. ISSN 0305-7364.
Identifiant IRD : fdi:010084735 -
Couvreur Thomas, Cornejo X., Zapata J. N., Loor A. (2022). Two new magnoliid (Annonaceae, Lauraceae) tree species from Manabi, western Ecuador. Blumea, 67 (2), p. 97-108. ISSN 0006-5196.
Identifiant IRD : fdi:010086912 -
Couvreur Thomas, Dagallier L. P. M. J., Crozier Françoise, Ghogue J. P., Hoekstra P. H., Kamdem N. G., Johnson D. M., Murray N. A., Sonké B. (2022). Flora of Cameroon - Annonaceae Vol 45. Phytokeys, (207), p. 1-532. ISSN 1314-2011.
Identifiant IRD : fdi:010086689 -
Cubry Philippe, Oddou-Muratorio S., Scotti I., Lefevre F. (2022). Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment. Journal of Evolutionary Biology, [Early access], p. [16 p.]. ISSN 1010-061X.
Identifiant IRD : fdi:010084321 -
D'Agostini F., Vadez Vincent, Kholova J., Ruiz-Perez J., Madella M., Lancelotti C. (2022). Understanding the relationship between water availability and biosilica accumulation in selected C-4 crop leaves : an experimental approach. Plants, 11 (8), p. 1019 [18 p.].
Identifiant IRD : fdi:010084690 -
de Aquino S. O., Kiwuka C., Tournebize R., Gain C., Marraccini P., Mariac Cédric, Bethune K., Couderc Marie, Cubry Philippe, Andrade A. C., Lepelley M., Darracq O., Crouzillat D., Anten N., Musoli P., Vigouroux Yves, Kochko Alexandre de, Manel S., Francois O., Poncet Valérie. (2022). Adaptive potential of Coffea canephora from Uganda in response to climate change. Molecular Ecology, [Early access], [20 p.]. ISSN 0962-1083.
Identifiant IRD : fdi:010084247 -
De la Fuente Canto Carla, Vigouroux Yves. (2022). Evaluation of nine statistics to identify QTLs in bulk segregant analysis using next generation sequencing approaches. BMC Genomics, 23 (1), 490 [12 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010085381 -
Duitama J., Bartley L. E., Guyot Romain, Sharma R. (2022). Grass genome evolution and domestication [Editorial]. Frontiers in Plant Science, 13, p. 866201 [2 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010085222 -
Durant E., Rouard M., Ganko E.W., Muller C., Cleary A.M., Farmer A.D., Conte M., Sabot François. (2022). Ten simple rules for developing visualization tools in genomics. PLoS Computational Biology, 18 (11), e1010622 [11 p.]. ISSN 1553-734X.
Identifiant IRD : fdi:010087309 -
Escobar S., Helmstetter A. J., Montufar R., Couvreur Thomas, Balslev H. (2022). Phylogenomic relationships and historical biogeography in the South American vegetable ivory palms (Phytelepheae). Molecular Phylogenetics and Evolution, 166, p. 107314 [7 p.]. ISSN 1055-7903.
Identifiant IRD : fdi:010083264 -
Faye A., Barnaud Adeline, Kane N. A., Cubry Philippe, Mariac Cédric, Burgarella C., Rhone B., Faye A., Olodo K. F., Cisse A., Couderc Marie, Dequincey A., Zekraoui Leila, Moussa D., Tidjani M., Vigouroux Yves, Berthouly Cécile. (2022). Genomic footprints of selection in early-and late-flowering pearl millet landraces. Frontiers in Plant Science, 13, p. 880631 [13 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010086408 -
Flowers J. M., Hazzouri K. M., Lemansour A., Capote T., Gros-Balthazard Muriel, Ferrand S., Lebrun M., Amiri K. M. A., Purugganan M. D. (2022). Patterns of volatile diversity yield insights into the genetics and biochemistry of the date palm fruit volatilome. Frontiers in Plant Science, 13, p. 853651 [14 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010084675 -
Gbemavo C. D. S. J., Toffa J., Tchakpa C., Loko Y. L. E., Djedatin G., Ewedje E. E., Orobiyi A., Sedah P., Sabot François. (2022). Rice farmers' perceptions and response to climate variability, and determinants of adaptation strategies in the Republic of Benin. International Journal of Climate Change Strategies and Management, 14 (4), 332-353. ISSN 1756-8692.
Identifiant IRD : fdi:010085136 -
Gonin M., Jeong Kwanho, Coudert Y., Lavarenne J., Hoang G. T., Bes M., To H. T. M., Thiaw M. R. N., Do T. V., Moukouanga Daniel, Guyomarc'h S., Bellande Kevin, Brossier J. R., Parizot B., Nguyen H. T., Beeckman T., Bergougnoux V., Rouster J., Sallaud C., Laplaze Laurent, Champion Antony, Gantet Pascal. (2022). CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice. Plant Journal, [Early access], p. [21 p.]. ISSN 0960-7412.
Identifiant IRD : fdi:010085414 -
Hajjarpoor Amir, Nelson W. C. D., Vadez Vincent. (2022). How process-based modeling can help plant breeding deal with G x E x M interactions. Field Crops Research, 283, p. 108554 [12 p.]. ISSN 0378-4290.
Identifiant IRD : fdi:010085218 -
Helmstetter A. J., Glemin S., Kafer J., Zenil-Ferguson R., Sauquet H., de Boer H., Dagallier L. P. M. J., Mazet N., Reboud E. L., Couvreur Thomas, Condamine F. L. (2022). Pulled diversification rates, lineages-through-time plots, and modern macroevolutionary modeling. Systematic Biology, [Early access], p. [16 p.]. ISSN 1063-5157.
Identifiant IRD : fdi:010084361 -
Hu G. B., Feng J. T., Xiang X., Wang J. B., Salojarvi J., Liu C. M., Wu Z. X., Zhang J. S., Liang X. M., Jiang Z. D., Liu W., Ou L. X., Li J. W., Fan G. Y., Mai Y. X., Chen C. J., Zhang X. T., Zheng J. K., Zhang Y. Q., Peng H. X., Yao L. X., Wai C. M., Luo X. P., Fu J. X., Tang H. B., Lan T. Y., Lai B. A., Sun J. H., Wei Y. Z., Li H. L., Chen J. Z., Huang X. M., Yan Q., Liu X., McHale L. K., Rolling L., Guyot Romain, Sankoff D., Zheng C. F., Albert V. A., Ming R. A., Chen H. B., Xia R., Li J. G. (2022). Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars. Nature Genetics, 54, p. 73-83 + [18 p.]. ISSN 1061-4036.
Identifiant IRD : fdi:010083934 -
Jankowski F., Barnaud Adeline. (2022). Gestion communautaire des semences et responsabilité collective envers l'agrobiodiversité : de la nécessaire reconnaissance des incommuns. Droit et Cultures, 84, p. 8683 [18 p.]. ISSN 0247-9788.
Identifiant IRD : fdi:010090118 -
Jaramillo-Botero A., Colorado J., Quimbaya M., Rebolledo M. C., Lorieux Mathias, Ghneim-Herrera T., Arango C. A., Tobon L. E., Finke J., Rocha C., Munoz F., Riascos J. J., Silva F., Chirinda N., Caccamo M., Vandepoele K., Goddard W. A. (2022). The OMICAS alliance, an international research program on multi-omits for crop breeding optimization. Frontiers in Plant Science, 13, 992663 [20 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010086444 -
Jousson A., Christe C., Stauffer F., Marazzi B., Aberlenc Frédérique, Maspoli G., Naciri Y. (2022). Panmixia and active colonisation of the invasive palm Trachycarpus fortunei (Arecaceae) in Southern Switzerland and Northern Italy as inferred by microsatellites and SNP markers. Biological Invasions, [Early access], p. [20 p.]. ISSN 1387-3547.
Identifiant IRD : fdi:010085925 -
Koutouleas A., Sarzynski T., Bertrand B., Bordeaux M., Bosselmann A. S., Campa Claudine, Etienne H., Turreira-Garcia N., Leran S., Markussen B., Marraccini P., Ramalho J. C., Vaast P., Raebild A. (2022). Shade effects on yield across different Coffea arabica cultivars - how much is too much ? A meta-analysis. Agronomy for Sustainable Development, 42 (4), p. 55 [13 p.]. ISSN 1774-0746.
Identifiant IRD : fdi:010085276 -
Koutouleas A., Sarzynski T., Bordeaux M., Bosselmann A. S., Campa Claudine, Etienne H., Turreira-Garcia N., Rigal C., Vaast P., Ramalho J. C., Marraccini P., Raebild A. (2022). Shaded-coffee : a nature-based strategy for coffee production under climate change ? A review. Frontiers in Sustainable Food Systems, 6, p. 877476 [21 p.].
Identifiant IRD : fdi:010085122 -
Kucko A., Alché J. D., Tranbarger Timothy, Wilmowicz E. (2022). The acceleration of yellow lupine flower abscission by jasmonates is accompanied by lipid-related events in abscission zone cells. Plant Science, 316, p. 111173 [11 p.]. ISSN 0168-9452.
Identifiant IRD : fdi:010083923 -
Kwolek K., Kedzierska P., Hankiewicz M., Mirouze Marie, Panaud O., Grzebelus D., Macko-Podgorni A. (2022). Diverse and mobile : eccDNA-based identification of carrot low-copy-number LTR retrotransposons active in callus cultures. Plant Journal, [Early access], p. [14 p.]. ISSN 0960-7412.
Identifiant IRD : fdi:010085079 -
Loko Y.L.E., Gbemavo C.D.S.J., Djedatin G., Ewedje E.E., Orobiyi A., Toffa J., Tchakpa C., Sedah P., Sabot François. (2022). Characterization of rice farming systems, production constraints and determinants of adoption of improved varieties by smallholder farmers of the Republic of Benin. Scientific Reports - Nature, 12, 3959 [19 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010083760 -
Mariac Cédric, Duponchelle Fabrice, Miranda G., Ramallo C., Wallace R., Tarifa G., Garcia-Davila C., Ortega H., Pinto J., Renno Jean-François. (2022). Unveiling biogeographical patterns of the ichthyofauna in the Tuichi basin, a biodiversity hotspot in the Bolivian Amazon, using environmental DNA. PLoS One, 17 (1), e0262357 [25 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010085913 -
Mboujda F. M. M., Avana-Tientcheu M. L., Momo S. T., Ntongme A. M., Vaissayre Virginie, Azandi L. N., Dussert Stéphane, Womeni H., Onana J. M., Sonke B., Tankou C., Duminil Jérôme. (2022). Domestication syndrome in Dacryodes edulis (Burseraceae) : comparison of morphological and biochemical traits between wild and cultivated populations. Plants, 11 (19), 2496 [15 p.].
Identifiant IRD : fdi:010086343 -
Mofini M. T., Diedhiou A. G., Simonin Marie, Dondjou D. T., Pignoly Sarah, Ndiaye C., Min D. H., Vigouroux Yves, Laplaze Laurent, Kane A. (2022). Cultivated and wild pearl millet display contrasting patterns of abundance and co-occurrence in their root mycobiome. Scientific Reports - Nature, 12 (1), 207 [17 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010084241 -
Ndoye M. S., Burridge J., Bhosale R., Grondin Alexandre, Laplaze Laurent. (2022). Root traits for low input agroecosystems in Africa : lessons from three case studies. Plant Cell and Environment, 45 (3), 637-649. ISSN 0140-7791.
Identifiant IRD : fdi:010084204 -
Nguyen H. T., Mantelin S., Ha C. V., Lorieux Mathias, Jones J. T., Mai C. D., Bellafiore Stéphane. (2022). Insights into the genetics of the Zhonghua 11 resistance to Meloidogyne graminicola and its molecular determinism in rice. Frontiers in Plant Science, 13, 854961 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010085121 -
Nguyen P. V., Bien T. L. T., Ton L. B., Le D. D., Kathrynwright M., Mantelin S., Petitot Anne-Sophie, Fernandez Diana, Bellafiore Stéphane. (2022). Meloidogyne-SP4 effector gene silencing reduces reproduction of root-knot nematodes in rice (Oryza sativa). Nematology, 24 (5), p. 571-588. ISSN 1388-5545.
Identifiant IRD : PAR00024456 -
Nunn A., Rodriguez-Arevalo I., Tandukar Z., Frels K., Contreras-Garrido A., Carbonell-Bejerano P., Zhang P. P., Ramos-Cruz D., Jandrasits K., Lanz C., Brusa A., Mirouze Marie, Dorn K., Jarvis B., Sedbrook J., Wyse D. L., Otto C., Langenberger D., Stadler P. F., Weigel D., Marks M. D., Anderson J. A., Becker C., Chopra R. (2022). Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates. Plant Biotechnology Journal, [Early access], p. [20 p.]. ISSN 1467-7644.
Identifiant IRD : fdi:010084266 -
Orozco-Arias S., Candamil-Cortes M. S., Jaimes P. A., Valencia-Castrillon E., Tabares-Soto R., Isaza G., Guyot Romain. (2022). Automatic curation of LTR retrotransposon libraries from plant genomes through machine learning. Journal of Integrative Bioinformatics, 19 (3), 20210036 [15 p.].
Identifiant IRD : fdi:010085408 -
Orozco-Arias S., Candamil M. S., Jaimes P. A., Cristancho M., Tabares-Soto R., Guyot Romain. (2022). Composition and diversity of LTR retrotransposons in the coffee leaf rust genome (Hemileia vastatrix). Agronomy, 12 (7), p. 1665 [17 p.].
Identifiant IRD : fdi:010085895 -
Peng H. R., Mirouze Marie, Bucher E. (2022). Extrachromosomal circular DNA : a neglected nucleic acid molecule in plants. Current Opinion in Plant Biology, 69, p. 102263 [9 p.]. ISSN 1369-5266.
Identifiant IRD : fdi:010086040 -
Penuela M., Gallo-Franco J. J., Finke J., Rocha C., Gkanogiannis A., Ghneim-Herrera T., Lorieux Mathias. (2022). Methylation in the CHH context allows to predict recombination in rice. International Journal of Molecular Sciences, 23 (20), p. 12505 [14 p.].
Identifiant IRD : fdi:010086378 -
Pilloni Raphael, Faye A., Kakkera A., Kholova J., Badji R., Faye C., Vadez Vincent. (2022). Higher sowing density of pearl millet increases productivity and water use efficiency in high evaporative demand seasons. Frontiers in Plant Science, 13, p. 1035181 [12 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010086756 -
Pitman N. C. A., White D. M., Andino J. E. G., Couvreur Thomas, Fortier R. P., Zapata J. N., Cornejo X., Clark J. L., Feeley K. J., Johnston M. K., Lozinguez Alix, Rivas-Torres G. (2022). Rediscovery of Gasteranthus extinctus L. E. S.kog & L. P. Kvist (Gesneriaceae) at multiple sites in western Ecuador. Phytokeys, (194), p. 33-46. ISSN 1314-2011.
Identifiant IRD : fdi:010085078 -
Sabot François. (2022). On the importance of metadata when sharing and opening data. BMC Genomic Data, 23 (1), p. 79 [3 p.].
Identifiant IRD : fdi:010086472 -
Saffar W., Bourguiba H., Cherif Emira, Chabrillange Nathalie, Hachef A., Ivorra S., Moussini S., Naqvi S. A., Littardi C., Zango O., Lemansour A., Abdoulkader S., Daher A., Terral J. F., Aberlenc Frédérique, Zehdi-Azouzi S. (2022). Towards the identification of wild African date palms in Kerkennah Islands from Tunisia by morphometric and genetic analyses. Scientia Horticulturae, 297, p. 110973 [11 p.]. ISSN 0304-4238.
Identifiant IRD : fdi:010085083 -
Scotti I., Lalague H., Oddou-Muratorio S., Scotti-Saintagne C., Daniels R. R., Grivet D., Lefevre F., Cubry Philippe, Fady B., Gonzalez-Martinez S. C., Roig A., Lesur-Kupin I., Bagnoli F., Guerin V., Plomion C., Rozenberg P., Vendramin G. G. (2022). Common microgeographical selection patterns revealed in four European conifers. Molecular Ecology, [Early access], p. [19 p.]. ISSN 0962-1083.
Identifiant IRD : fdi:010086482 -
Siena L. A., Azzaro C. A., Podio M., Stein J., Leblanc Olivier, Pessino S. C., Ortiz J. P. A. (2022). The auxin-response repressor IAA30 is down-regulated in reproductive tissues of apomictic Paspalum notatum. Plants, 11 (11), 1472 [19 p.].
Identifiant IRD : fdi:010085245 -
Tournebize Rémi, Borner L., Manel S., Meynard C. N., Vigouroux Yves, Crouzillat D., Fournier C., Kassam M., Descombes P., Dubreuil Tranchant Christine, Parrinello H., Kiwuka C., Sumirat U., Legnate H., Kambale J. L., Sonke B., Mahinga J. C., Musoli P., Janssens S. B., Stoffelen P., Kochko Alexandre de, Poncet Valérie. (2022). Ecological and genomic vulnerability to climate change across native populations of Robusta coffee (Coffea canephora). Global Change Biology, [Early access], [19 p.]. ISSN 1354-1013.
Identifiant IRD : fdi:010084759 -
Tregear James, Richaud F., Collin Myriam, Esbelin J., Parrinello H., Cochard B., Nodichao L., Morcillo F., Adam Hélène, Jouannic Stefan. (2022). Micro-RNA-regulated SQUAMOSA-PROMOTER BINDING PROTEIN-LIKE (SPL) gene expression and cytokinin accumulation distinguish early-developing male and female inflorescences in oil palm (Elaeis guineensis). Plants, 11 (5), 685 [16 p.].
Identifiant IRD : fdi:010084583 -
Vernet A., Meynard D., Lian Q. C., Mieulet D., Gibert O., Bissah M., Rivallan R., Autran Daphné, Leblanc Olivier, Meunier A. C., Frouin J., Taillebois J., Shankle K., Khanday I., Mercier R., Sundaresan V., Guiderdoni E. (2022). High-frequency synthetic apomixis in hybrid rice. Nature Communications, 13 (1), p. 7963 [13 p.].
Identifiant IRD : fdi:010086997 -
von Baeyer M., Tranbarger Timothy, Spengler R. N. (2022). Loss of reproductive organ separation zones as adaptation to anthropogenic seed-dispersal-based mutualism. Annual Plant Reviews Online, 5 (4), p. 345-382.
Identifiant IRD : PAR00026101 -
Wilmowicz E., Kucko A., Tranbarger Timothy, Ostrowski M., Niedojadlo J., Karwaszewski J., Kapuscinska D., Panek K. (2022). EPIP as an abscission promoting agent in the phytohormonal pathway. Plant Physiology and Biochemistry, 178, 137-145. ISSN 1873-2690.
Identifiant IRD : fdi:010084666
Articles
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Adji B.I., Akaffou D.S., Letort V., Kang M., Wang M., Jaeger M., De Reffye P., Kouassi K.H., Houphouet Y.P., Duminil Jérôme, Caraglio Y., Sabatier S. (2022). The architectural unit setting up and architectural characteristics of Néré, Parkia biglobosa, Jack, R. Br. (Fabaceae). American Journal of Plant Sciences, 13 (1), 109-136. ISSN 2158-2742.
Identifiant IRD : fdi:010088390 -
Aubertin Catherine, Pham Jean-Louis. (2022). L'Accès et le Partage des avantages (APA) face à la numérisation du vivant. SFE2 = Société Française d'Écologie et d'Évolution [site internet], 22 mars 2022, en ligne [10 p.].
Identifiant IRD : fdi:010086620 -
Benti T., Gebre E., Tesfaye K., Berecha G., Lashermes Philippe, Kyalo M., Yao N.K. (2022). Assessment of genetic diversity among elite breeding lines of Arabica Coffee (Coffea arabica L.) in Ethiopia using simple sequence repeats markers. American Journal of Biochemistry and Biotechnology, 18 (4), 394-404. ISSN 1553-3468.
Identifiant IRD : fdi:010091571 -
Luquet D., Kane N.A., Vadez Vincent. (2022). Face à la sécheresse, innover pour transformer notre agriculture. The Conversation France, 4 septembre, en ligne [6 p.]. ISSN 2431-2134.
Identifiant IRD : fdi:010087117 -
Orjuela J., Comte Aurore, Ravel S., Charriat F., Vi T., Sabot François, Cunnac Sébastien. (2022). CulebrONT : a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes. Peer Community Journal, 2, e46 [9 p.]. ISSN 2804-3871.
Identifiant IRD : fdi:010089128
Directions d'ouvrages ou de revues
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Lucas Mikaël (ed.). (2022). Plant systems biology : methods and protocols.
New York : Springer, 348 p. (Methods in Molecular Biology ; 2395). ISBN 9781071618141. ISSN 1064-3745.
Identifiant IRD : fdi:010084046
Ouvrages
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Battesti V., Gros-Balthazard Muriel, Breil M., Ivorra S., Ferrand S., Terral J.F. (2022). Is Barni, a date palm cultivated in the oasis of al-'Ula, a true-to-type cultivar or an ethnovariety ? : arguments from ethnographic and genetic data.
Paris ; Marseille ; Abou Dhabi : CNRS ; IRD ; NYU, 17 p. multigr.
Identifiant IRD : fdi:010091549
Chapitres ou parties d'ouvrages
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Audebert A., Luquet D., Vadez Vincent, Foncéka D., Kane N.A. (2022). Toward a regional field phenotyping network in West Africa. In :
Kane N.A. (ed.), Foncéka D. (ed.), Dalton T.J. (ed.). Crop adaptation and improvement for drought-prone environments. Manhattan : New Prairie Press, 238-257. ISBN 978-1-944548-47-6.
Identifiant IRD : fdi:010088421 -
Barnaud Adeline, Berthouly Cécile, Pham Jean-Louis, Vigouroux Yves, Jankowski F. (2022). Agrobiodiversité et durabilité : jouons collaboratif !. In :
Dangles Olivier (coord.), Fréour Claire (coord.). Science de la durabilité : comprendre, co-construire, transformer (volume 1). Marseille : IRD, 80-83.
Identifiant IRD : fdi:010085441 -
Barnaud Adeline, Billot C., Abrouk M.D., Adjebeng-Danquah J., Akanvou L., Ahmed H.I., Adje C.O.A., Bakasso Y., Barry M.B., Achigan-Dako E.G., Yerima A.R.I.B., Kane Ndjido A., Krattinger S.G., Oselebe H., Saidou S., Sekloka E., Uyoh E.A., Vigouroux Yves, Gueye M.C. (2022). From shade to light : fonio, an african orphan crop, towards renewed challenges. In :
Kane N.A. (ed.), Foncéka D. (ed.), Dalton T.J. (ed.). Crop adaptation and improvement for drought-prone environments. Manhattan : New Prairie Press, 383-403. ISBN 978-1-944548-47-6.
Identifiant IRD : fdi:010088425 -
Faye A., Laplaze Laurent, Sine B., Chopart J.L. (2022). RACINE2.2 : a software application for processing and mapping spatial distribution of root length density and potential root extraction ratio from root counts on trench profiles. In :
Lucas Mikaël (ed.). Plant systems biology : methods and protocols. New York : Springer, 247-258. (Methods in Molecular Biology ; 2395). ISBN 9781071618141. ISSN 1064-3745.
Identifiant IRD : fdi:010084050 -
Grondin Alexandre, Bhosale R., Atkinson J.A., Faye A., Jones D.H., Benson E., Burridge James, Sine B., Vadez Vincent, Pridmore T., Wells D.M., Laplaze Laurent, Kane N.A., Bennett M.J. (2022). High-throughput root phenotyping : opportunities and challenges for the adaptation of arid and semi arid crops to future climates. In :
Kane N.A. (ed.), Foncéka D. (ed.), Dalton T.J. (ed.). Crop adaptation and improvement for drought-prone environments. Manhattan : New Prairie Press, 258-282. ISBN 978-1-944548-47-6.
Identifiant IRD : fdi:010088422 -
Guyomarc'h S., Lucas Mikaël, Laplaze Laurent. (2022). Postembryonic organogenesis in plants : experimental induction of new shoot and root organs. In :
Lucas Mikaël (ed.). Plant systems biology : methods and protocols. New York : Springer, 79-95. (Methods in Molecular Biology ; 2395). ISBN 9781071618141. ISSN 1064-3745.
Identifiant IRD : fdi:010084049 -
Labadie Michel, Desconnets Jean-Christophe, Sabot François. (2022). Données numériques et durabilité. In :
Dangles Olivier (coord.), Fréour Claire (coord.). Science de la durabilité : comprendre, co-construire, transformer (volume 1). Marseille : IRD, 150-153.
Identifiant IRD : fdi:010085456 -
Larmande Pierre, Tagny Ngompe G., Venkatesan A., Ruiz M. (2022). AgroLD : a knowledge graph database for plant functional genomics. In :
Edwards D. (ed.). Plant bioinformatics : methods and protocols. New York : Springer - Humana Press, 2443, 527-540. (Methods in Molecular Biology). ISBN 978-1-07-162066-3. ISSN 1064-3745.
Identifiant IRD : fdi:010084869 -
Lucas Mikaël. (2022). Plant systems biology : lessons for teaching. In :
Lucas Mikaël (ed.). Plant systems biology : methods and protocols. New York : Springer, 1-12. (Methods in Molecular Biology ; 2395). ISBN 9781071618141. ISSN 1064-3745.
Identifiant IRD : fdi:010084047 -
Lucas Mikaël. (2022). How to use the TDCor algorithm to infer gene regulatory networks from time series transcriptomic data. In :
Lucas Mikaël (ed.). Plant systems biology : methods and protocols. New York : Springer, 13-31. (Methods in Molecular Biology ; 2395). ISBN 978-1-07-161814-1. ISSN 1064-3745.
Identifiant IRD : fdi:010084048 -
Lucas Mikaël. (2022). Future challenges in plant systems biology. In :
Lucas Mikaël (ed.). Plant systems biology : methods and protocols. New York : Springer, 325-337. (Methods in Molecular Biology ; 2395). ISBN 9781071618141. ISSN 1064-3745.
Identifiant IRD : fdi:010084051 -
Lucas Mikaël. (2022). Plant systems biology : further reading and resources. In :
Lucas Mikaël (ed.). Plant systems biology : methods and protocols. New York : Springer, 339-346. (Methods in Molecular Biology ; 2395). ISBN 9781071618141. ISSN 1064-3745.
Identifiant IRD : fdi:010084052 -
Ndour P.M.S., Achouak W., Heulin T., Laplaze Laurent, Cournac Laurent. (2022). Using root-soil interactions in the rhizosphere as valuable traits for selection against drought. In :
Kane N.A. (ed.), Foncéka D. (ed.), Dalton T.J. (ed.). Crop adaptation and improvement for drought-prone environments. Manhattan : New Prairie Press, 283-304. ISBN 978-1-944548-47-6.
Identifiant IRD : fdi:010088423 -
Sempéré G., Larmande Pierre, Rouard M. (2022). Managing high-density genotyping data with Gigwa. In :
Edwards D. (ed.). Plant bioinformatics : methods and protocols. New York : Springer - Humana Press, 2443, 415-427. (Methods in Molecular Biology). ISBN 978-1-07-162066-3. ISSN 1064-3745.
Identifiant IRD : fdi:010084868 -
Thuillet Anne-Céline, Renard D., Cubry Philippe, Barnaud Adeline, Berthouly Cécile. (2022). Biodiversity as a cornerstone of agrosystem's sustainability in West Africa. In :
Kane N.A. (ed.), Foncéka D. (ed.), Dalton T.J. (ed.). Crop adaptation and improvement for drought-prone environments. Manhattan : New Prairie Press, 331-360. ISBN 978-1-944548-47-6.
Identifiant IRD : fdi:010088424
Colloques, congrès, séminaires
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Aventurier Pascal, Alaux M., Barthelemy C., Bonnet P., Hugo Catherine, Dzalé E., Deboin M.C., Decker Luc, Desconnets Jean-Christophe, Doux G., Fortuno S., Mougin C., Perez Jérôme, Sabot François, Szabo D. (2022). Data FAIRification in a cross-institutional governance framework : recommendations from the ANR-BRIDGE project [poster].
Paris ; Montpellier : INRAE ; CIRAD ; IRD, 1 p. multigr. Plenary Meeting, Part of International Data Week, 19., Séoul (KOR), 2022/06/20-23.
Identifiant IRD : fdi:010090478
Thèses, mémoires, diplômes
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Zhang Panpan. (2022). Étude du paysage des éléments transposables sous forme d'ADN circulaire extrachromosomique et dans l'assemblage des génomes de plantes à l'aide du séquençage en lectures longues.
Montpellier : IRD, 181 p. multigr. Th. Gén. et Amélioration des Plantes, Univ. de Montpellier. 2022/05/30.
Identifiant IRD : fdi:010087015
2021
Articles référencés dans le Web of Science
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Adji B. I., Akaffou D. S., Kouassi K. H., Houphouet Y. P., De Reffye P., Duminil Jérôme, Jaeger M., Sabatier S. (2021). Allometric models for non-destructive estimation of dry biomass and leaf area in Khaya senegalensis (Desr.) A. Juss (Meliaceae), Pterocarpus erinaceus Pear. (Fabaceae) and Parkia biglobosa, Jack, R. Br. (Fabaceae) [+ Correction, 16/07/2021, 1 page]. Trees-Structure and Function, [Early access], [15 p. + Correction, 16/07/2021, 1 page]. ISSN 0931-1890.
Identifiant IRD : fdi:010082104 -
Akaffou S. D., Kouame A. K., Gore N. B. B., Abessika G. Y., Kouassi H. K., Hamon Perla, Sabatier S., Duminil Jérôme. (2021). Effect of the seeds provenance and treatment on the germination rate and plants growth of four forest trees species of Cote d'Ivoire. Journal of Forestry Research, 32 (1), 161-169. ISSN 1007-662X.
Identifiant IRD : fdi:010077186 -
Ayala-Usma D. A., Cardenas M., Guyot Romain, De Mares M. C., Bernal A., Munoz A. R., Restrepo S. (2021). A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans. BMC Genomics, 22 (1), p. 795 [21 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010083301 -
Beggi F., Vadez Vincent, Buerkert A. (2021). Ammonium fertilization increases pearl millet yield by promoting early root growth, higher tillering, and water use during grain filling in a low P Sahelian soil. Journal of Plant Nutrition and Soil Science, 184 (1), 123-131. ISSN 1436-8730.
Identifiant IRD : fdi:010080391 -
Belton S., Cubry Philippe, Fox E., Kelleher C. T. (2021). Novel post-glacial haplotype evolution in birch : a case for conserving local adaptation. Forests, 12 (9), p. 1246 [18 p.].
Identifiant IRD : fdi:010083137 -
Benti T., Gebre E., Tesfaye K., Berecha G., Lashermes Philippe, Kyallo M., Yao N. K. (2021). Genetic diversity among commercial arabica coffee (Coffea arabica L.) varieties in Ethiopia using simple sequence repeat markers. Journal of Crop Improvement, 35 (2), 147-168. ISSN 1542-7528.
Identifiant IRD : fdi:010079733 -
Couvreur Thomas, Dauby Gilles, Blach-Overgaard A., Deblauwe V., Dessein S., Droissart Vincent, Hardy O. J., Harris D. J., Janssens S. B., Ley A. C., Mackinder B. A., Sonke B., Sosef M. S. M., Stevart T., Svenning J. C., Wieringa J. J., Faye A., Missoup A. D., Tolley K. A., Nicolas V., Ntie S., Fluteau F., Robin C., Guillocheau F., Barboni D., Sepulchre P. (2021). Tectonics, climate and the diversification of the tropical African terrestrial flora and fauna. Biological Reviews, 96 (1), 16-51. ISSN 1464-7931.
Identifiant IRD : fdi:010079691 -
Dagallier L. P. M. J., Mbago F. M., Luke W. R. Q., Couvreur Thomas. (2021). Three new species of Uvariodendron (Annonaceae) from coastal East Africa in Kenya and Tanzania. Phytokeys, (174), p. 107-126. ISSN 1314-2011.
Identifiant IRD : fdi:010081124 -
Djerrab D., Bertrand B., Breitler J. C., Leran S., Dechamp E., Campa Claudine, Barrachina C., Conejero G., Etienne H., Sulpice R. (2021). Photoperiod-dependent transcriptional modifications in key metabolic pathways in Coffea arabica. Tree Physiology, 41 (2), p. 302-316. ISSN 0829-318X.
Identifiant IRD : fdi:010081530 -
Do Q., Hai H. B., Larmande Pierre. (2021). PyRice : a Python package for querying Oryza sativa databases. Bioinformatics, 37 (7), p. 1037-1038. ISSN 1367-4803.
Identifiant IRD : fdi:010082132 -
Duminil Jérôme, Besnard G. (2021). Utility of the mitochondrial genome in plant taxonomic studies. In :
Besse P. (ed.). Molecular plant taxonomy : methods and protocols. New York : Humana Press, 107-118. (Methods in Molecular Biology ; 2222). ISBN 978-1-0716-0996-5.
Identifiant IRD : fdi:010083569 -
Duponchelle Fabrice, Isaac V. J., Doria C., Van Damme P. A., Herrera G. A., Anderson E. P., Cruz R. E. A., Hauser M., Hermann T. W., Agudelo E., Bonilla-Castillo C., Barthem R., Freitas C. E. C., Garcia-Davila C., Garcia-Vasquez A., Renno Jean-François, Castello L. (2021). Conservation of migratory fishes in the Amazon basin. Aquatic Conservation-Marine and Freshwater Ecosystems, 31 (5), 1087-1105. ISSN 1052-7613.
Identifiant IRD : fdi:010081083 -
Durant E., Sabot François, Conte M., Rouard M. (2021). Panache : a web browser-based viewer for linearized pangenomes. Bioinformatics, 37 (23), p. 4556-4558. ISSN 1367-4803.
Identifiant IRD : fdi:010083836 -
Echenique V., Autran Daphné, Leblanc Olivier. (2021). Proceedings of the 7th Series of Seminars on Advances in Apomixis Research. Plants, 10 (3), 565 [17 p.].
Identifiant IRD : fdi:010081105 -
Escobar S., Helmstetter A. J., Jarvie S., Montufar R., Balslev H., Couvreur Thomas. (2021). Pleistocene climatic fluctuations promoted alternative evolutionary histories in Phytelephas aequatorialis, an endemic palm from western Ecuador. Journal of Biogeography, 48 (5), 1023-1037. ISSN 0305-0270.
Identifiant IRD : fdi:010080628 -
Fooyontphanich K., Morcillo F., Joët Thierry, Dussert Stéphane, Serret Julien, Collin Myriam, Amblard P., Tangphatsornruang S., Roongsattham P., Jantasuriyarat C., Verdeil J. L., Tranbarger Timothy. (2021). Multi-scale comparative transcriptome analysis reveals key genes and metabolic reprogramming processes associated with oil palm fruit abscission. BMC Plant Biology, 21 (1), 92 [18 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010080990 -
Gano B., Dembele J. S. B., Tovignan T. K., Sine B., Vadez Vincent, Diouf D., Audebert A. (2021). Adaptation responses to early drought stress of West Africa sorghum varieties. Agronomy, 11 (3), p. 443 [21 p.].
Identifiant IRD : fdi:010081152 -
Garot E., Dussert Stéphane, Domergue F., Joët Thierry, Fock-Bastide I., Combes Marie-Christine, Lashermes Philippe. (2021). Multi-approach analysis reveals local adaptation in a widespread forest tree of Reunion island. Plant and Cell Physiology, 62 (2), 280-292. ISSN 0032-0781.
Identifiant IRD : fdi:010081733 -
Gros-Balthazard Muriel, Baker W.J., Leitch I.J., Pellicer J., Powell R.F., Bellot S. (2021). Systematics and evolution of the Genus Phoenix : towards understanding date palm origins. In :
Al-Khayri J.M. (ed.), Jain S.M. (ed.), Johnson D.V. (ed.). The date palm genome, vol. 1 : phylogeny, biodiversity and mapping. Cham : Springer, 29-54. (Compendium of Plant Genomes). ISBN 978-3-030-73748-1.
Identifiant IRD : fdi:010088363 -
Gros-Balthazard Muriel, Flowers J. M., Hazzouri K. M., Ferrand S., Aberlenc Frédérique, Sallon S., Purugganan M. D. (2021). The genomes of ancient date palms germinated from 2,000 y old seeds. Proceedings of the National Academy of Sciences of the United States of America, 118 (19), e2025337118 [10 p.]. ISSN 0027-8424.
Identifiant IRD : fdi:010081525 -
Gros-Balthazard Muriel, Flowers J.M. (2021). A brief history of the origin of domesticated date palms. In :
Al-Khayri J.M. (ed.), Jain S.M. (ed.), Johnson D.V. (ed.). The date palm genome, vol. 1 : phylogeny, biodiversity and mapping. Cham : Springer, 55-74. (Compendium of Plant Genomes). ISBN 978-3-030-73748-1.
Identifiant IRD : fdi:010088364 -
Guignon V., Breton C., Mariette J., Sabot François, Fumey J., Lefort V., Fiston-Lavier A. S. (2021). Ten simple rules for switching from face-to-face to remote conference : an opportunity to estimate the reduction in GHG emissions. PLoS Computational Biology, 17 (10), e1009321 [13 p.]. ISSN 1553-734X.
Identifiant IRD : fdi:010083328 -
Guyomarc'h S., Boutte Y., Laplaze Laurent. (2021). AP2/ERF transcription factors orchestrate very long chain fatty acid biosynthesis during Arabidopsis lateral root development. Molecular Plant, 14 (2), p. 205-207. ISSN 1674-2052.
Identifiant IRD : fdi:010081136 -
Hajjarpoor Amir, Kholova J., Pasupuleti J., Soltani A., Burridge J., Degala S. B., Gattu S., Murali T. V., Garin V., Radhakrishnan T., Vadez Vincent. (2021). Environmental characterization and yield gap analysis to tackle genotype-by-environment-by-management interactions and map region-specific agronomic and breeding targets in groundnut. Field Crops Research, 267, p. 108160 [15 p.]. ISSN 0378-4290.
Identifiant IRD : fdi:010081484 -
Hernandez-Lagana E., Mosca G., Mendocilla-Sato E., Pires N., Frey A., Giraldo-Fonseca A., Michaud Caroline, Grossniklaus U., Hamant O., Godin C., Boudaoud A., Grimanelli Daniel, Autran Daphné, Baroux C. (2021). Organ geometry channels reproductive cell fate in the Arabidopsis ovule primordium. eLife, 10, p. e66031 [46 p.]. ISSN 2050-084X.
Identifiant IRD : fdi:010082172 -
Hosni H., Diallo A., Morcillo F., Vaissayre Virginie, Collin Myriam, Dubreuil Tranchant Christine, Dussert Stéphane, Joët Thierry, Castano F., Marquinez X., Stauffer F. W., Hodel D. R., Mont J. J. C., Adam Hélène, Jouannic Stefan, Tregear James. (2021). Redox-related gene expression and sugar accumulation patterns are altered in the edible inflorescence produced by the cultivated form of pacaya palm (Chamaedorea tepejilote). Annals of Botany, 128 (2), 231-240. ISSN 0305-7364.
Identifiant IRD : fdi:010083846 -
Jimenez M. F. T., Prata E. M. B., Zizka A., Cohn-Haft M., de Oliveira A. V. G., Emilio T., Chazot N., Couvreur Thomas, Kamga S. M., Sonke B., Cano A., Collevatti R. G., Kuhnhauser B. G., Baker W. J., Antonelli A., Bacon C. D. (2021). Phylogenomics of the palm tribe Lepidocaryeae (Calamoideae : Arecaceae) and description of a new species of Mauritiella. Systematic Botany, 46 (3), p. 863-874. ISSN 0363-6445.
Identifiant IRD : fdi:010084289 -
Kalendar R., Sabot François, Rodriguez F., Karlov G. I., Natali L., Alix K. (2021). Mobile elements and plant genome evolution, comparative analyzes and computational tools : editorial. Frontiers in Plant Science, 12, 735134 [3 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010083210 -
Kar S., Purbey V. K., Suradhaniwar S., Korbu L. B., Kholova J., Durbha S. S., Adinarayana J., Vadez Vincent. (2021). An ensemble machine learning approach for determination of the optimum sampling time for evapotranspiration assessment from high-throughput phenotyping data. Computers and Electronics in Agriculture, 182, p. 105992 [14 p.]. ISSN 0168-1699.
Identifiant IRD : fdi:010081173 -
Khong G. N., Le N. T., Pham M. T., Adam Hélène, Gauron Carole, Le H. Q., Pham D. T., Colonges K., Pham X. H., Do V. N., Lebrun M., Jouannic Stefan. (2021). A cluster of Ankyrin and Ankyrin-TPR repeat genes is associated with panicle branching diversity in rice. PLoS Genetics, 17 (6), p. e1009594 [24 p.]. ISSN 1553-7404.
Identifiant IRD : fdi:010082186 -
Kiwuka C., Goudsmit E., Tournebize R., de Aquino S. O., Douma J. C., Bellanger L., Crouzillat D., Stoffelen P., Sumirat U., Legnate H., Marraccini P., Kochko Alexandre de, Andrade A. C., Mulumba J. W., Musoli P., Anten N. P. R., Poncet Valérie. (2021). Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner) : climate influences, breeding potential and diversity conservation. PLoS One, 16 (2), p. e0245965 [19 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010081077 -
Kuhnhauser B. G., Bellot S., Couvreur Thomas, Dransfield J., Henderson A., Schley R., Chomicki G., Eiserhardt W. L., Hiscock S. J., Baker W. J. (2021). A robust phylogenomic framework for the calamoid palms. Molecular Phylogenetics and Evolution, 157, p. 107067 [13 p.]. ISSN 1055-7903.
Identifiant IRD : fdi:010081025 -
Lanciano S., Zhang Panpan, Llauro C., Mirouze Marie. (2021). Identification of extrachromosomal circular forms of active transposable elements using mobilome-seq. In :
Cho Jungnam (ed.). Plant transposable elements : methods and protocols. New York : Humana Press - Springer, 87-93. (Methods in Molecular Biology ; 2250). ISBN 978-1-0716-1133-3.
Identifiant IRD : fdi:010083448 -
Larmande Pierre, Todorov K. (2021). AgroLD : a knowledge graph for the plant sciences. In :
Hotho A. (ed.), Blomqvist E. (ed.), Dietze S. (ed.), Fokoue A. (ed.), Ding Y. (ed.), Barnaghi P. (ed.), Haller A. (ed.), Dragoni M. (ed.), Alani H. (ed.). The semantic web - ISWC 2021. Cham : Springer, 12922, 496-510. (Lecture Notes in Computer Science). ISWC 2021 : International Semantic Web Conference, 20., [En ligne], 2021/10/24-28. ISBN 978-3-030-88360-7.
Identifiant IRD : fdi:010083662 -
Lenters T. P., Henderson A., Dracxler C. M., Elias G. A., Kamga S. M., Couvreur Thomas, Kissling W. D. (2021). Integration and harmonization of trait data from plant individuals across heterogeneous sources. Ecological Informatics, 62, p. 101206 [11 p.]. ISSN 1574-9541.
Identifiant IRD : fdi:010081349 -
Loko Y. L. E., Ewedje E. E., Orobiyi A., Djedatin G., Toffa J., Gbemavo C. D. S. J., Tchakpa C., Gavoedo D., Sedah P., Sabot François. (2021). On-farm management of rice diversity, varietal preference criteria, and farmers' perceptions of the African (Oryza glaberrima Steud.) versus Asian rice (Oryza sativa L.) in the Republic of Benin (West Africa) : implications for breeding and conservation. Economic Botany, 75 (1), 1-29. ISSN 0013-0001.
Identifiant IRD : fdi:010082397 -
Louafi S., Thomas M., Berthet E. T., Pelissier F., Vaing K., Jankowski F., Bazile D., Pham Jean-Louis, Leclercq M. (2021). Crop diversity management system commons : revisiting the role of genebanks in the network of crop diversity actors. Agronomy, 11 (9), p. 1893 [15 p.].
Identifiant IRD : fdi:010083163 -
Luong A., Adam Hélène, Gauron Carole, Affortit P., Ntakirutimana F., Khong N. G., Le Q. H., Le T. N., Fournel Marie, Lebrun M., Tregear James, Jouannic Stefan. (2021). Functional diversification of euANT/PLT genes in Oryza sativa panicle architecture determination. Frontiers in Plant Science, 12, 692955 [14 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010082328 -
Mariac Cédric, Renno Jean-François, Garcia-Davila C., Vigouroux Yves, Mejia E., Angulo C., Ruiz D. C., Estivals G., Nolorbe C., Vasquez A. G., Nunez Rodriguez Jesus, Cochonneau Gérard, Flores M., Alvarado J., Vertiz J., Chota-Macuyama W., Sanchez H., Miranda G., Duponchelle Fabrice. (2021). Species-level ichthyoplankton dynamics for 97 fishes in two major river basins of the Amazon using quantitative metabarcoding. Molecular Ecology, [Early access], [22 p.]. ISSN 0962-1083.
Identifiant IRD : fdi:010081493 -
Meschichi A., Ingouff M., Picart C., Mirouze Marie, Desset S., Gallardo F., Bystricky K., Picault N., Rosa S., Pontvianne F. (2021). ANCHOR : a technical approach to monitor single-copy locus localization in planta. Frontiers in Plant Science, 12, 677849 [9 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010082306 -
Montufar R., Recalde A., Couvreur Thomas. (2021). High genetic diversity with low connectivity among Mauritia flexuosa (Arecaceae) stands from Ecuadorean Amazonia. Biotropica, 53 (1), 152-161. ISSN 0006-3606.
Identifiant IRD : fdi:010079794 -
Morcillo F., Serret Julien, Beckers A., Collin Myriam, Tisne S., George S., Poveda R., Louise C., Tranbarger Timothy. (2021). A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism. Genes, 12 (11), 1724 [18 p.].
Identifiant IRD : fdi:010083787 -
Morcillo F., Vaissayre Virginie, Serret Julien, Avallone S., Domonhedo H., Jacob F., Dussert Stéphane. (2021). Natural diversity in the carotene, tocochromanol and fatty acid composition of crude palm oil. Food Chemistry, 365, 130638 [10 p.]. ISSN 0308-8146.
Identifiant IRD : fdi:010082722 -
Morel J., Duminil Jérôme, Munzinger Jérôme. (2021). Bopopia, a new monotypic genus of Gesneriaceae (Gesnerioideae, Coronanthereae) from New Caledonia. European Journal of Taxonomy, 736, p. 82-101.
Identifiant IRD : fdi:010081074 -
Ndour Papa Mamadou Sitor, Barry C. M., Tine D., De la Fuente Canto Carla, Gueye M., Barakat M., Ortet P., Achouak W., Ndoye I., Sine B., Laplaze Laurent, Heulin T., Cournac Laurent. (2021). Pearl millet genotype impacts microbial diversity and enzymatic activities in relation to root-adhering soil aggregation. Plant and Soil, 464 (1-2), 109-129. ISSN 0032-079X.
Identifiant IRD : fdi:010081335 -
Nelson W. C. D., Hoffmann M. P., Vadez Vincent, Rotter R. P., Koch M., Whitbread A. M. (2021). Can intercropping be an adaptation to drought ? A model-based analysis for pearl millet-cowpea. Journal of Agronomy and Crop Science, [Early access], p. [18 p.]. ISSN 0931-2250.
Identifiant IRD : fdi:010082779 -
Orozco-Arias S., Candamil-Cortes M. S., Jaimes P. A., Pina J. S., Tabares-Soto R., Guyot Romain, Isaza G. (2021). K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes. PeerJ, 9, p. e11456 [20 p.]. ISSN 2167-8359.
Identifiant IRD : fdi:010081522 -
Orozco-Arias S., Candamil-Cortes M. S., Valencia-Castrillon E., Jaimes P. A., Orozco N. T., Arias-Mendoza M., Tabares-Soto R., Guyot Romain, Isaza G., IEEE. (2021). SENMAP : a convolutional neural network architecture for curation of LTR-RT libraries from plant genomes. 2021 IEEE 2nd International Congress of Biomedical Engineering and Bioengineering, p. 341660 [4 p.].
Identifiant IRD : fdi:010086138 -
Orozco-Arias S., Jaimes P. A., Candamil M. S., Jimenez-Varon C. F., Tabares-Soto R., Isaza G., Guyot Romain. (2021). InpactorDB : a classified lineage-level plant LTR retrotransposon reference library for free-alignment methods based on machine learning. Genes, 12 (2), p. 190 [17 p.].
Identifiant IRD : fdi:010081058 -
Pandey M. K., Gangurde S. S., Sharma V., Pattanashetti S. K., Naidu G. K., Faye I., Hamidou F., Desmae H., Kane N. A., Yuan M., Vadez Vincent, Nigam S. N., Varshney R. K. (2021). Improved genetic map identified major QTLs for drought tolerance- and iron deficiency tolerance-related traits in groundnut. Genes, 12 (1), p. 37 [22 p.].
Identifiant IRD : fdi:010080624 -
Parent J. S., Cahn J., Herridge R. P., Grimanelli Daniel, Martienssen R. A. (2021). Small RNAs guide histone methylation in Arabidopsis embryos. Genes and Development, 35 (11-12), 841-846. ISSN 0890-9369.
Identifiant IRD : fdi:010082042 -
Pasquet Rémy, Feleke Y., Gepts P. (2021). Cowpea [Vigna unguiculata (L.) Walp.] maternal lineages, chloroplast captures, and wild cowpea evolution. Genetic Resources and Crop Evolution, 68, 2799-2812. ISSN 0925-9864.
Identifiant IRD : fdi:010081088 -
Perez-Escobar O. A., Bellot S., Przelomska N. A. S., Flowers J. M., Nesbitt M., Ryan P., Gutaker R. M., Gros-Balthazard Muriel, Wells T., Kuhnhauser B. G., Schley R., Bogarin D., Dodsworth S., Diaz R., Lehmann M., Petoe P., Eiserhardt W. L., Preick M., Hofreiter M., Hajdas I., Purugganan M., Antonelli A., Gravendeel B., Leitch I. J., Jimenez M. F. T., Papadopulos A. S. T., Chomicki G., Renner S. S., Baker W. J. (2021). Molecular clocks and archeogenomics of a late period Egyptian date palm leaf reveal introgression from wild relatives and add timestamps on the domestication. Molecular Biology and Evolution, 38 (10), p. 4475-4492. ISSN 0737-4038.
Identifiant IRD : fdi:010083346 -
Peros J. P., Cousins P., Launay A., Cubry Philippe, Walker A., Prado E., Peressotti E., Wiedemann-Merdinoglu S., Laucou V., Merdinoglu D., This P., Boursiquot J. M., Doligez A. (2021). Genetic diversity and population structure in Vitis species illustrate phylogeographic patterns in eastern North America. Molecular Ecology, 30 (10), 2333-2348. ISSN 0962-1083.
Identifiant IRD : fdi:010081277 -
Raharimalala N., Rombauts S., McCarthy A., Garavito A., Orozco-Arias S., Bellanger L., Morales-Correa A. Y., Froger S., Michaux S., Berry V., Metairon S., Fournier C., Lepelley M., Mueller L., Couturon Emmanuel, Hamon Perla, Rakotomalala J. J., Descombes P., Guyot Romain, Crouzillat D. (2021). The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago. Scientific Reports - Nature, 11 (1), p. 8119 [14 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010081437 -
Rimlinger A., Avana M. L., Awono A., Chakocha A., Gakwavu A., Lemoine T., Marie L., Mboujda F., Vigouroux Yves, Johnson V., Vinceti B., Carrière Stéphanie M., Duminil Jérôme. (2021). Trees and their seed networks : the social dynamics of urban fruit trees and implications for genetic diversity. PLoS One, 16 (3), e0243017 [13 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010081129 -
Rimlinger A., Duminil Jérôme, Lemoine T., Avana M. L., Chakocha A., Gakwavu A., Mboujda F., Tsogo M., Elias M., Carrière Stéphanie M.. (2021). Shifting perceptions, preferences and practices in the African fruit trade : the case of African plum (Dacryodes edulis) in different cultural and urbanization contexts in Cameroon. Journal of Ethnobiology and Ethnomedicine, 17 (1), 65 [17 p.].
Identifiant IRD : fdi:010083310 -
Sow M.D., Le Gac A.L., Fichot R., Lanciano S., Delaunay A., Le Jan I., Lesage-Descauses M.C., Citerne S., Caius J., Brunaud V., Soubigou-Taconnat L., Cochard H., Segura V., Chaparro C., Grunau C., Daviaud C., Tost J., Brignolas F., Strauss S.H., Mirouze Marie, Maury S. (2021). RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar. New Phytologist, 232 (1), 80-97. ISSN 0028-646X.
Identifiant IRD : fdi:010082448 -
Sriwichai W., Collin Myriam, Avallone S. (2021). Partial disintegration of vegetable cell wall during cooking improves vitamin K1 (phylloquinone) bioaccessibility in in vitro digestion. International Journal for Vitamin and Nutrition Research, 91 (5-6), p. 439-450. ISSN 0300-9831.
Identifiant IRD : PAR00023380 -
Strijk J. S., Hinsinger D. D., Roeder M. M., Chatrou L. W., Couvreur Thomas, Erkens R. H. J., Sauquet H., Pirie M. D., Thomas D. C., Cao K. F. (2021). Chromosome-level reference genome of the soursop (Annona muricata) : a new resource for Magnoliid research and tropical pomology. Molecular Ecology Resources, 21 (5), 1608-1619. ISSN 1755-098X.
Identifiant IRD : fdi:010081122 -
Toffa J., Loko Y. L. E., Djedatin G., Gbemavo C. D. S. J., Orobiyi A., Tchakpa C., Ewedje E. E., Sabot François. (2021). Rice pests in the Republic of Benin : farmers' perceptions, knowledge and management practices. Pest Management Science, 77 (11), 5058-5071. ISSN 1526-498X.
Identifiant IRD : fdi:010082322 -
Vadez Vincent, Choudhary S., Kholova J., Hash C. T., Srivastava R., Kumar A. A., Prandavada A., Anjaiah M. (2021). Transpiration efficiency : insights from comparisons of C-4 cereal species. Journal of Experimental Botany, 72 (14), p. 5221-5234. ISSN 0022-0957.
Identifiant IRD : fdi:010082672 -
Varshney R. K., Roorkiwal M., Sun S., Bajaj P., Chitikineni A., Thudi M., Singh N. P., Du X., Upadhyaya H. D., Khan A. W., Wang Y., Garg V., Fan G. Y., Cowling W. A., Crossa J., Gentzbittel L., Voss-Fels K. P., Valluri V. K., Sinha P., Singh V. K., Ben C. L., Rathore A., Punna R., Singh M. K., Tar'an B., Bharadwaj C., Yasin M., Pithia M. S., Singh S., Soren K. R., Kudapa H., Jarquin D., Cubry Philippe, Hickey L. T., Dixit G. P., Thuillet Anne-Céline, Hamwieh A., Kumar S., Deokar A. A., Chaturvedi S. K., Francis A., Howard R., Chattopadhyay D., Edwards D., Lyons E., Vigouroux Yves, Hayes B., von Wettberg E., Datta S. K., Yang H. M., Nguyen H. T., Wang J., Siddique K. H. M., Mohapatra T., Bennetzen J. L., Xu X., Liu X. (2021). A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, [Early access], [6 p.] + [19 p.]. ISSN 0028-0836.
Identifiant IRD : fdi:010083322 -
Wilmowicz E., Kucko A., Pokora W., Kapusta M., Jasieniecka-Gazarkiewicz K., Tranbarger Timothy, Wolska M., Panek K. (2021). EPIP-evoked modifications of redox, lipid, and pectin homeostasis in the abscission zone of lupine flowers. International Journal of Molecular Sciences, 22 (6), p. 3001 [21 p.].
Identifiant IRD : fdi:010081427
Articles
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Adji B.I., Akaffou D.S., Kouassi K.H., Houphouet Y.P., Duminil Jérôme, Sabatier S.A. (2021). Bioclimate influence on seed germination and seedling morphology parameters in Pterocarpus erinaceus Poir., 1804 (Fabaceae). International Journal of Environment, Agriculture and Biotechnology, 6 (3), 1-15. ISSN 2456-1878.
Identifiant IRD : fdi:010086261 -
Autran Daphné, Bassel G.W., Chae E., Ezer D., Ferjani A., Fleck C., Hamant O., Hartmann F.P., Jiao Y., Johnston I.G., Kwiatkowska D., Lim B.L., Mahönen A.P., Morris R.J., Mulder B.M., Nakayama N., Sozzani R., Strader L.C., Ten Tusscher K., Ueda M., Wolf S. (2021). What is quantitative plant biology ?. Quantitative Plant Biology, 2, e10 [16 p.]. ISSN 2632-8828.
Identifiant IRD : fdi:010085845 -
Barro M., Konate K.A., Wonni I., Kassankogno A.I., Sabot François, Albar Laurence, Somda I., Béna Gilles, Ghesquière Alain, Kam H., Sié M., Cubry Philippe, Tollenaere Charlotte. (2021). Assessment of genetic diversity of rice in registered cultivars and farmers' fields in Burkina Faso. Crops, 1 (3), 129-141. ISSN 2673-7655.
Identifiant IRD : fdi:010083579 -
Larmande Pierre, Liu Y., Yao X., Xia J. (2021). OryzaGP 2021 update : a rice gene and protein dataset for named-entity recognition. Genomics and Informatics, 19 (3), e27 [4 p.]. ISSN 2234-0742.
Identifiant IRD : fdi:010093865
Directions d'ouvrages ou de revues
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Silvain J.F. (ed.), Goffaux R. (ed.), Soubelet H. (ed.), Sarrazin F. (ed.), Abbadie L., Albert C., Alizon I., Barot Sébastien, Bazile D., Billet P., Boudet C., Charbonnel N., Charmantier A., Dobigny Gauthier, Emperaire Laure, Gaba S., Gaubert Philippe, Gilot-Fromont E., Goffaux R., Grandcolas P., Guégan Jean-François, Jactel H., Laurans Y., Leblan Vincent, Le Gall L., Levrel H., Morand S., Morel J. L., Moutou F., Pham Jean-Louis, Plantard O., Pontier D., Roche Benjamin, Roger F., Sainteny G., Sarrazin F., Scemama P., Soubeyrand S., Thybaud E., Vittecoq M., Vourc'h G. (2021). Mobilisation de la FRB par les pouvoirs publics français sur les liens entre Covid-19 et biodiversité.
Paris : FRB, 63 p. multigr.
Identifiant IRD : fdi:010083451
Ouvrages
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Battesti V., Gros-Balthazard Muriel. (2021). Ethnographic, genetic, and morphometric analyses of the date palm agrobiodiversity in al-'Ula oasis [second year report].
Paris ; Marseille ; Abou Dhabi : CNRS ; IRD ; NYU, 22 p. multigr.
Identifiant IRD : fdi:010091550 -
Muchugi A., Chege J., Tsobeng A., Kang'ethe S., Jamnadass R., Cognetti de Martiis S., Cerutti A.L., Alercia A., Carrière Stéphanie M. (collab.), Duminil Jérôme (collab.), Rimlinger Aurore (collab.). (2021). Key descriptors for Dacryodes edulis (G.Don) H.J. Lam.
Nairobi : World Agroforestry - ICRAF, 11 p. ISBN 978-9966-108-42-5.
Identifiant IRD : fdi:010082020
Chapitres ou parties d'ouvrages
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Aubertin Catherine, Nivart A., Pham Jean-Louis. (2021). Introduction générale. In :
Aubertin Catherine (ed.), Nivart Anne (ed.). La nature en partage : autour du protocole de Nagoya. Marseille ; Paris : IRD ; MNHN, 15-23. (Objectifs Suds). ISBN 978-2-7099-2909-7.
Identifiant IRD : fdi:010082949 -
Aubertin Catherine, Nivart A., Pham Jean-Louis. (2021). General introduction. In :
Aubertin Catherine (ed.), Nivart Anne (ed.). Nature in common : beyond the Nagoya protocol. Marseille ; Paris : IRD ; MNHN, 15-23. (Objectifs Suds). ISBN 978-2-7099-2911-0.
Identifiant IRD : fdi:010083712 -
Aubertin Catherine, Pham Jean-Louis. (2021). L'APA face à la numérisation du vivant. In :
Aubertin Catherine (ed.), Nivart A. (ed.). La nature en partage : autour du protocole de Nagoya. Marseille ; Paris : IRD ; MNHN, 295-309. (Objectifs Suds). ISBN 978-2-7099-2909-7.
Identifiant IRD : fdi:010082955 -
Aubertin Catherine, Pham Jean-Louis. (2021). Conclusion. In :
Aubertin Catherine (ed.), Nivart A. (ed.). La nature en partage : autour du protocole de Nagoya. Marseille ; Paris : IRD ; MNHN, 311-315. (Objectifs Suds). ISBN 978-2-7099-2909-7.
Identifiant IRD : fdi:010082956 -
Aubertin Catherine, Pham Jean-Louis. (2021). ABS and the digitisation of the living world. In :
Aubertin Catherine (ed.), Nivart A. (ed.). Nature in common : beyond the Nagoya protocol. Marseille ; Paris : IRD ; MNHN, 289-303. (Objectifs Suds). ISBN 978-2-7099-2911-0.
Identifiant IRD : fdi:010083722 -
Aubertin Catherine, Pham Jean-Louis. (2021). Conclusion. In :
Aubertin Catherine (ed.), Nivart A. (ed.). Nature in common : beyond the Nagoya protocol. Marseille ; Paris : IRD ; MNHN, 305-309. (Objectifs Suds). ISBN 978-2-7099-2911-0.
Identifiant IRD : fdi:010083724 -
Cissé A., Berthouly-Salazar Cécile, Sall S.N., Renard D., Clermont-Dauphin Cathy, Ndiaye A., Barnaud Adeline, Kane N.A. (2021). Agrobiodiversité et transition agroécologique : regards croisés de chercheurs et paysans. In :
Profizi Jean Pierre (ed.), Ardila-Chauvet Stéphanie (ed.), Billot C. (ed.), Couteron Pierre (ed.), Delmas M. (ed.), Diep T.M.H. (ed.), Grandcolas P. (ed.), Kokou K. (ed.), Muller S. (ed.), Rana Anshuman (ed.), Ranarijaona H. L. T. (ed.), Sonke B. (ed.). Biodiversité des écosystèmes intertropicaux : connaissance, gestion durable et valorisation. Marseille : IRD, 539-550. (Synthèses). ISBN 978-2-7099-2938-7.
Identifiant IRD : fdi:010084802 -
Pham Jean-louis. (2021). Les ressources génétiques : de la domestication aux centres de ressources biologiques. In :
Aubertin Catherine (ed.), Nivart A. (ed.). La nature en partage : autour du protocole de Nagoya. Marseille ; Paris : IRD ; MNHN, 31-47. (Objectifs Suds). ISBN 978-2-7099-2909-7.
Identifiant IRD : fdi:010082950 -
Pham Jean-louis. (2021). Genetic resources : from domestication to biological resource centres. In :
Aubertin Catherine (ed.), Nivart A. (ed.). Nature in common : beyond the Nagoya protocol. Marseille ; Paris : IRD ; MNHN, 31-46. (Objectifs Suds). ISBN 978-2-7099-2911-0.
Identifiant IRD : fdi:010083714 -
Rakotoarinivo M., Dransfield J., Beentje H., Rafidison V.M., Turk R.D., Couvreur Thomas, Rapanarivo S.H., Andriambololonera S., Baker W..J. (2021). Palmiers (Arecaceae) de Madagascar : élaboration d'une stratégie de conservation et d'utilisation durable. In :
Profizi Jean Pierre (ed.), Ardila-Chauvet Stéphanie (ed.), Billot C. (ed.), Couteron Pierre (ed.), Delmas M. (ed.), Diep T.M.H. (ed.), Grandcolas P. (ed.), Kokou K. (ed.), Muller S. (ed.), Rana Anshuman (ed.), Ranarijaona H. L. T. (ed.), Sonke B. (ed.). Biodiversité des écosystèmes intertropicaux : connaissance, gestion durable et valorisation. Marseille : IRD, 671-681. (Synthèses). ISBN 978-2-7099-2938-7.
Identifiant IRD : fdi:010084805
Autres publications, littérature grise
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Rabemanantsoa T., Pigeon D., Mathieu G., Chipeaux C., Duvillard S., Gruson-Daniel C., Herbet M., Legrand A., Leon N., Libri D., Lily J.B., Peyrat J.F., Pinet A., Sabot François, Seydi Moussa, Theisen V. (2021). Report of the working group on electronic lab notebooks.
[s.l.] : French Committee for Open Science, 66 p. multigr.
Identifiant IRD : fdi:010089125 -
Rabemanantsoa T., Pigeon D., Mathieu G., Chipeaux C., Duvillard S., Gruson-Daniel C., Herbet M., Legrand A., Leon N., Libri D., Lily J.B., Peyrat J.F., Pinet A., Sabot François, Seydi Moussa, Theisen V. (2021). Rapport du groupe de travail sur les cahiers de laboratoires électroniques.
[s.l.] : Comité pour la Science Ouverte, 68 p. multigr.
Identifiant IRD : fdi:010089126 -
Sabot François. (2021). Using small fragments to discover old TE remnants : the Duster approach empowers the TE detection [recommandation]. Peer Community in Genomics, 100004, en ligne [4 p.].
Identifiant IRD : fdi:010080353 -
Silvain J.F. (ed.), Goffaux R. (ed.), Soubelet H. (ed.), Sarrazin F. (ed.), Abbadie L., Albert C., Alizon S., Arpin I., Barot Sébastien, Barthelemey D., Bazile D., Billet P., Boudet C., Charbonnel N., Charmantier A., Dobigny Gauthier, Emperaire Laure, Gaba S., Gaubert Philippe, Gilot-Fromont E., Goffaux R., Grandcolas P., Guégan Jean-François, Jactel H., Laurans Y., Leblan Vincent, Le Gall L., Levrel H., Morand S., Morel J.L., Moutou F., Pham Jean-Louis, Plantard O., Pontier D., Roche Benjamin, Roger F., Sainteny G., Scemama P., Soubeyrand S., Thybaud E., Vittecoq M., Vourc'h G. (2021). The link between Covid-19 and biodiversity : a report commissioned by the french public authorities.
Paris : FRB, 59 p. multigr.
Identifiant IRD : fdi:010085632
2020
Articles référencés dans le Web of Science
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Abrouk M., Ahmed H. I., Cubry Philippe, Simonikova D., Cauet S., Pailles Y., Bettgenhaeuser J., Gapa L., Scarcelli Nora, Couderc Marie, Zekraoui Leila, Kathiresan N., Cizkova J., Hribova E., Dolezel J., Arribat S., Berges H., Wieringa J. J., Gueye M., Kane N. A., Leclerc C., Causse S., Vancoppenolle S., Billot C., Wicker T., Vigouroux Yves, Barnaud Adeline, Krattinger S. G. (2020). Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate. Nature Communications, 11 (1), p. 4488 [13 p.]. ISSN 2041-1723.
Identifiant IRD : fdi:010080475 -
Amimi N., Dussert Stéphane, Vaissayre Virginie, Ghouil H., Doulbeau Sylvie, Costantini Carlo, Ammari Y., Joët Thierry. (2020). Variation in seed traits among Mediterranean oaks in Tunisia and their ecological significance. Annals of Botany, 125 (6), p. 891-904. ISSN 0305-7364.
Identifiant IRD : PAR00021145 -
Bellot S., Bayton R. P., Couvreur Thomas, Dodsworth S., Eiserhardt W. L., Guignard M. S., Pritchard H. W., Roberts L., Toorop P. E., Baker W. J. (2020). On the origin of giant seeds : the macroevolution of the double coconut (Lodoicea maldivica) and its relatives (Borasseae, Arecaceae). New Phytologist, 228 (3), 1134-1148. ISSN 0028-646X.
Identifiant IRD : fdi:010079417 -
Bogusz Didier, Franche Claudine. (2020). Frankia and the actinorhizal symbiosis. In :
Sharma V. (ed.), Salwan R. (ed.), Al-Ani L.K.T. (ed.). Molecular aspects of plant beneficial microbes in agriculture. Londres : Academic Press, 367-380. ISBN 978-0-12-818469-1.
Identifiant IRD : fdi:010084166 -
Bree B., Helmstetter A. J., Bethune Kévin, Ghogue J. P., Sonke B., Couvreur Thomas. (2020). Diversification of African rainforest restricted clades : Piptostigmateae and Annickieae (Annonaceae). Diversity, 12 (6), p. art. 227 [18 p.].
Identifiant IRD : fdi:010079411 -
Campbell M. T., Grondin Alexandre, Walia H., Morota G. (2020). Leveraging genome-enabled growth models to study shoot growth responses to water deficit in rice. Journal of Experimental Botany, 71 (18), p. 5669-5679. ISSN 0022-0957.
Identifiant IRD : fdi:010079824 -
Charr J. C., Garavito A., Guyeux C., Crouzillat D., Descombes P., Fournier C., Ly S. N., Raharimalala E. N., Rakotomalala J. J., Stoffelen P., Janssens S., Hamon Perla, Guyot Romain. (2020). Complex evolutionary history of coffees revealed by full plastid genomes and 28,800 nuclear SNP analyses, with particular emphasis on Coffea canephora (Robusta coffee). Molecular Phylogenetics and Evolution, 151, p. 106906 [13 p.]. ISSN 1055-7903.
Identifiant IRD : fdi:010079508 -
Chevallier Tiphaine, Loireau Maud, Courault Romain, Chapuis Lardy Lydie, Desjardins Thierry, Gomez Cécile, Grondin Alexandre, Guérin Frédéric, Orange Didier, Pélissier Raphaël, Serpantié Georges, Durand Marie-Hélène, Derioz P., Laruelle Goulven G., Schwoob M.H., Viovy N., Barrière Olivier, Blanchart Eric, Blanfort V., Brossard Michel, Demenois J., Fargette Mireille, Heulin T., Mahé Gil, Manlay R., Podwojewski Pascal, Rumpel C., Sultan Benjamin, Chotte Jean-Luc. (2020). Paris Climate Agreement : promoting interdisciplinary science and stakeholders' approaches for multi-scale implementation of continental carbon sequestration. Sustainability, 12 (17), art. 6715 [20 p.]. ISSN 2071-1050.
Identifiant IRD : fdi:010078313 -
Choudhary S., Guha A., Kholova J., Pandravada A., Messina C. D., Cooper M., Vadez Vincent. (2020). Maize, sorghum, and pearl millet have highly contrasting species strategies to adapt to water stress and climate change-like conditions. Plant Science, 295, art. 110297 [14 p.]. ISSN 0168-9452.
Identifiant IRD : fdi:010079100 -
Cordeiro L. D., Collin Myriam, Callado C. H., Simoes-Gurgel C., Albarello N., Engelmann Florent. (2020). Long-term conservation of Tarenaya rosea (Cleomaceae) root cultures : histological and histochemical analyses during cryopreservation using the encapsulation-vitrification technique. Protoplasma, 257 (4), 1021-1033. ISSN 0033-183X.
Identifiant IRD : fdi:010077957 -
Cubry Philippe, Pidon H., Ta K. N., Dubreuil Tranchant Christine, Thuillet Anne-Céline, Holzinger M., Adam Hélène, Kam H., Chrestin Harold, Ghesquière Alain, Francois O., Sabot François, Vigouroux Yves, Albar Laurence, Jouannic Stefan. (2020). Genome wide association study pinpoints key agronomic QTLs in African rice Oryza glaberrima. Rice, 13 (1), p. 66 [12 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010079766 -
De la Fuente Canto Carla, Simonin Marie, King E., Moulin Lionel, Bennett M. J., Castrillo G., Laplaze Laurent. (2020). An extended root phenotype : the rhizosphere, its formation and impacts on plant fitness. Plant Journal, 103 (3), 951-964. ISSN 0960-7412.
Identifiant IRD : fdi:010078066 -
Diack O., Kanfany G., Gueye M. C., Sy O., Fofana A., Tall H., Serba D. D., Zekraoui Leila, Berthouly Cécile, Vigouroux Yves, Diouf D., Kane N. A. (2020). GWAS unveils features between early- and late-flowering pearl millets. BMC Genomics, 21 (1), 777 [11 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010080003 -
Diagne N., Djighaly P.I., Ngom M., Pesce C., Champion Antony, Svistoonoff Sergio, Hocher Valérie, Tisa L.S. (2020). Advances in Frankia genome studies and molecular aspects of tolerance to environmental stresses. In :
Sharma V. (ed.), Salwan R. (ed.), Al-Ani L.K.T. (ed.). Molecular aspects of plant beneficial microbes in agriculture. Londres ; San Diego ; Cambridge : Academic Press, 381-389. ISBN 9780128184691.
Identifiant IRD : fdi:010084167 -
Djighaly P. I., Ngom D., Diagne N., Fall D., Ngom M., Diouf D., Hocher Valérie, Laplaze Laurent, Champion Antony, Farrant J. M., Svistoonoff Sergio. (2020). Effect of Casuarina plantations inoculated with arbuscular mycorrhizal fungi and Frankia on the diversity of herbaceous vegetation in saline environments in Senegal. Diversity, 12 (8), p. 293 [17 p.].
Identifiant IRD : fdi:010079815 -
Donkpegan A. S. L., Piñeiro R., Heuertz M., Duminil Jérôme, Daïnou K., Doucet J. L., Hardy O. J. (2020). Population genomics of the widespread African savannah trees Afzelia africana and Afzelia quanzensis reveals no significant past fragmentation of their distribution ranges. American Journal of Botany, 107 (3), p. 498-509. ISSN 0002-9122.
Identifiant IRD : fdi:010078950 -
Escobar-Torrez K., Ledru Marie-Pierre, Ortuno T., Lombardo U., Renno Jean-François. (2020). Landscape changes in the southern Amazonian foreland basin during the Holocene inferred from Lake Ginebra, Beni, Bolivia. Quaternary Research, 94, p. 46-60. ISSN 0033-5894.
Identifiant IRD : fdi:010080928 -
Estivals G., Duponchelle Fabrice, Romer U., Garcia-Davila C., Airola E., Deleglise M., Renno Jean-François. (2020). The Amazonian dwarf cichlid Apistogramma agassizii (Steindachner, 1875) is a geographic mosaic of potentially tens of species : conservation implications. Aquatic Conservation : Marine and Freshwater Ecosystems, 30 (8), 1521-1539. ISSN 1052-7613.
Identifiant IRD : fdi:010079346 -
Fruchard C., Badouin H., Latrasse D., Devani R. S., Muyle A., Rhoné Bénédicte, Renner S. S., Banerjee A. K., Bendahmane A., Marais G. A. B. (2020). Evidence for dosage compensation in Coccinia grandis, a plant with a highly heteromorphic XY system. Genes, 11 (7), p. art. 787 [18 p.].
Identifiant IRD : fdi:010079466 -
Garcia-Davila C., Gomero D. A., Renno Jean-François, Soria R. D., Pizango G. H., Llampazo G. F., Castro-Ruiz D., de Loayza E. M., Chavez C. A., Mader M., Tysklind N., Paredes-Villanueva K., Torres D. D., Degen B., Coronado E. N. H. (2020). Molecular evidence for three genetic species of Dipteryx in the Peruvian Amazon. Genetica, 148 (1), p. 1-11. ISSN 0016-6707.
Identifiant IRD : fdi:010077983 -
Gaudou Benoit, Huynh N. Q., Philippon Damien, Brugiere A., Chapuis K., Taillandier P., Larmande Pierre, Drogoul Alexis. (2020). COMOKIT : a modeling kit to understand, analyze, and compare the impacts of mitigation policies against the COVID-19 epidemic at the scale of a city. Frontiers in Public Health, 8, p. 563247 [18 p.].
Identifiant IRD : fdi:010079819 -
Grimanelli Daniel, Ingouff M. (2020). DNA methylation readers in plants. Journal of Molecular Biology, 432 (6), p. 1706-1717. ISSN 0022-2836.
Identifiant IRD : fdi:010079026 -
Grondin Alexandre, Affortit P., Dubreuil Tranchant Christine, de la Fuente-Canto C., Mariac Cédric, Gantet Pascal, Vadez Vincent, Vigouroux Yves, Laplaze Laurent. (2020). Aquaporins are main contributors to root hydraulic conductivity in pearl millet [Pennisetum glaucum (L) R. Br.]. PLoS One, 15 (10), 0233481 [19 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010080007 -
Gros-Balthazard M., Battesti V., Ivorra S., Paradis L., Aberlenc Frédérique, Zango O., Zehdi-Azouzi S., Moussouni S., Naqvi S. A., Newton C., Terral J. F. (2020). On the necessity of combining ethnobotany and genetics to assess agrobiodiversity and its evolution in crops : a case study on date palms (Phoenix dactylifera L.) in Siwa Oasis, Egypt. Evolutionary Applications, 13 (8), 1818-1840. ISSN 1752-4571.
Identifiant IRD : fdi:010077934 -
Guerin C., Serret Julien, Montufar R., Vaissayre Virgine, Bastos-Siqueira Aldecinei, Durand-Gasselin T. , Tregear James, Morcillo F., Dussert Stéphane. (2020). Palm seed and fruit lipid composition : phylogenetic and ecological perspectives. Annals of Botany, 125 (1), p. 157-172. ISSN 0305-7364.
Identifiant IRD : fdi:010078572 -
Guyot Romain, Hamon Perla, Couturon Emmanuel, Raharimalala N., Rakotomalala J. J., Lakkanna S., Sabatier S., Affouard A., Bonnet P. (2020). WCSdb : a database of wild Coffea species [Data paper]. Database, baaa069 [6 p.]. ISSN 1758-0463.
Identifiant IRD : fdi:010080466 -
Hauser M., Duponchelle Fabrice, Hermann T. W., Limburg K. E., Castello L., Stewart D. J., Torrente-Vilara G., Garcia-Vasquez A., Garcia-Davila C., Pouilly Marc, Pecheyran C., Ponzevera E., Renno Jean-François, Moret A. S., Doria C. R. C. (2020). Unmasking continental natal homing in goliath catfish from the upper Amazon. Freshwater Biology, 65 (2), 325-336. ISSN 0046-5070.
Identifiant IRD : fdi:010077430 -
Helmstetter A. J., Amoussou B. E. N., Bethune Kévin, Kamdem N. G., Kakai R. G., Sonke B., Couvreur Thomas. (2020). Phylogenomic approaches reveal how climate shapes patterns of genetic diversity in an African rain forest tree species. Molecular Ecology, 29 (18), 3560-3573. ISSN 0962-1083.
Identifiant IRD : fdi:010079528 -
Helmstetter A. J., Bethune K., Kamdem N. G., Sonke B., Couvreur Thomas. (2020). Individualistic evolutionary responses of Central African rain forest plants to Pleistocene climatic fluctuations. Proceedings of the National Academy of Sciences of the United States of America, 117 (51), p. 32509-32518. ISSN 0027-8424.
Identifiant IRD : fdi:010080551 -
Helmstetter A. J., Kamga S. M., Bethune Kévin, Lautenschlager T., Zizka A., Bacon C. D., Wieringa J. J., Stauffer F., Antonelli A., Sonke B., Couvreur Thomas. (2020). Unraveling the phylogenomic relationships of the most diverse African palm genus Raphia (Calamoideae, Arecaceae). Plants, 9 (4), p. art. 549 [20 p.].
Identifiant IRD : fdi:010078206 -
Hernandez-Lagana E., Autran Daphné. (2020). H3.1 eviction marks female germline precursors in Arabidopsis. Plants, 9 (10), 1322 [8p.].
Identifiant IRD : fdi:010079954 -
Hufnagel B., Marques A., Soriano A., Marques L., Divol F., Doumas P., Sallet E., Mancinotti D., Carrere S., Marande W., Arribat S., Keller J., Huneau C., Blein T., Aime D., Laguerre M., Taylor J., Schubert V., Nelson M., Geu-Flores F., Crespi M., Gallardo K., Delaux P. M., Salse J., Berges H., Guyot Romain, Gouzy J., Peret B. (2020). High-quality genome sequence of white lupin provides insight into soil exploration and seed quality. Nature Communications, 11 (1), p. art. 492 [12 p.]. ISSN 2041-1723.
Identifiant IRD : fdi:010079158 -
Jankowski F., Louafi S., Kane N. A., Diol M., Camara A. D., Pham Jean-Louis, Berthouly Cécile, Barnaud Adeline. (2020). From texts to enacting practices : defining fair and equitable research principles for plant genetic resources in West Africa. Agriculture and Human Values, 37 (4), 1083-1094. ISSN 0889-048X.
Identifiant IRD : fdi:010079060 -
Janssens S. B., Couvreur Thomas, Mertens A., Dauby Gilles, Dagallier Lpmj, Vanden Abeele S., Vandelook F., Mascarello M., Beeckman H., Sosef M., Droissart Vincent, van der Bank M., Maurin O., Hawthorne W., Marshall C., Réjou-Méchain Maxime, Beina D., Baya F., Merckx V., Verstraete B., Hardy O. (2020). A large-scale species level dated angiosperm phylogeny for evolutionary and ecological analyses. Biodiversity Data Journal, 8, art. E39677 [23 p.]. ISSN 1314-2836.
Identifiant IRD : fdi:010077840 -
Kamga S. M., Brokamp G., Cosiaux Ariane, Awono A., Furniss S., Barfod A. S., Muafor F. J., Le Gall Philippe, Sonké B., Couvreur Thomas. (2020). Use and cultural significance of Raphia palms. Economic Botany, 74 (2), 207-225. ISSN 0013-0001.
Identifiant IRD : fdi:010078873 -
Kar S., Garin V., Kholova J., Vadez Vincent, Durbha S. S., Tanaka R., Iwata H., Urban M. O., Adinarayana J. (2020). SpaTemHTP : a data analysis pipeline for efficient processing and utilization of temporal high-throughput phenotyping data. Frontiers in Plant Science, 11, p. 552509 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010080396 -
Kar S., Tanaka R., Iwata H., Kholova J., Durbha S.S., Adinarayana J., Vadez Vincent. (2020). Multi-scale time series analysis of evapotranspiration for high-throughput phenotyping frequency optimization. In :
2020 IEEE Latin American GRSS and ISPRS Remote Sensing Conference (LAGIRS) : proceedings. Piscataway : IEEE, 98-103. LAGIRS.Latin American GRSS and ISPRS Remote Sensing Conference, Santiago (CHL), 2020/03/22-26. ISBN 978-1-7281-4350-7.
Identifiant IRD : fdi:010084185 -
Kar S., Tanaka R., Korbu L. B., Kholova J., Iwata H., Durbha S. S., Adinarayana J., Vadez Vincent. (2020). Automated discretization of 'transpiration restriction to increasing VPD' features from outdoors high-throughput phenotyping data. Plant Methods, 16 (1), p. 140 [20 p.].
Identifiant IRD : fdi:010079890 -
Konan J. A., Guyot Romain, Koffi K. K., Vroh-Bi I., Zoro A. I. B. (2020). Molecular confirmation of varietal status in bottle gourd (Lagenaria siceraria) using genotyping-by-sequencing. Genome, 63 (11), p. 535-545. ISSN 0831-2796.
Identifiant IRD : fdi:010079962 -
Kpatenon M. J., Salako K. V., Santoni S., Zekraoui Leila, Latreille M., Tollon-Cordet C., Mariac Cédric, Jaligot E., Beule T., Adeoti K. (2020). Transferability, development of simple sequence repeat (SSR) markers and application to the analysis of genetic diversity and population structure of the African fan palm (Borassus aethiopum Mart.) in Benin. BMC Genetics, 21 (1), 145 [23 p.]. ISSN 1471-2156.
Identifiant IRD : fdi:010080444 -
Kusuma J., Scarcelli Nora, Couderc Marie, Mariac Cédric, Zekraoui Leila, Duminil Jérôme. (2020). Microsatellite markers development for Indonesian nutmeg (Myristica fragrans Houtt.) and transferability to other Myristicaceae spp. Molecular Biology Reports, 47 (6), 4835-4840. ISSN 0301-4851.
Identifiant IRD : fdi:010078070 -
Labouisse J. P., Cubry Philippe, Austerlitz F., Rivallan R., Nguyen H. A. (2020). New insights on spatial genetic structure and diversity of Coffea canephora (Rubiaceae) in Upper Guinea based on old herbaria. Plant Ecology and Evolution, 153 (1), p. 82-100. ISSN 2032-3913.
Identifiant IRD : fdi:010078955 -
Lacchini E., Kiegle E., Castellani M., Adam Hélène, Jouannic Stefan, Gregis V., Kater M. M. (2020). CRISPR-mediated accelerated domestication of African rice landraces. PLoS One, 15 (3), p. art. e0229782 [12 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010078097 -
Larrieu A., Nguyen T.H., Champion Antony. (2020). Use of fluorescent reporters to analyse dynamic and spatial responses to mechanical wounding. In :
Champion Antony (ed.), Laplaze Laurent (ed.). Jasmonate in plant biology : methods and protocols. New York : Humana Press, 161-168. (Methods in Molecular Biology). ISBN 978-1-0716-0141-9.
Identifiant IRD : fdi:010082339 -
Lavarenne J., Gonin M., Champion Antony, Javelle M., Adam Hélène, Rouster J., Conejero G., Lartaud M., Verdeil J. L., Laplaze Laurent, Sallaud C., Lucas Mikaël, Gantet Pascal. (2020). Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice. PLoS One, 15 (11), e0238736 [15 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010080521 -
Le Corre V., Siol M., Vigouroux Yves, Tenaillon M. I., Delye C. (2020). Adaptive introgression from maize has facilitated the establishment of teosinte as a noxious weed in Europe. Proceedings of the National Academy of Sciences of the United States of America, 117 (41), p. 25618-25627. ISSN 0027-8424.
Identifiant IRD : fdi:010079833 -
Lemos S. M. C., Foncatti L. F. C., Guyot Romain, Paschoal A. R., Domingues D. S. (2020). Genome-wide screening and characterization of non-coding RNAs in Coffea canephora. Non-Coding RNA, 6 (3), p. 39 [15p.].
Identifiant IRD : fdi:010079866 -
Lompo D., Vinceti B., Konrad H., Duminil Jérôme, Geburek T. (2020). Fine-scale spatial genetic structure, mating, and gene dispersal patterns in Parkia biglobosa populations with different levels of habitat fragmentation. American Journal of Botany, 107 (7), 1041-1053. ISSN 0002-9122.
Identifiant IRD : fdi:010079325 -
Ly S. N., Garavito A., De Block P., Asselman P., Guyeux C., Charr J. C., Janssens S., Mouly A., Hamon Perla, Guyot Romain. (2020). Chloroplast genomes of Rubiaceae : comparative genomics and molecular phylogeny in subfamily Ixoroideae. PLoS One, 15 (4), p. art. e0232295 [21 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010078132 -
Miranda-Chumacero G., Mariac Cédric, Duponchelle Fabrice, Painter L., Wallace R., Cochonneau Gérard, Molina-Rodriguez J., Garcia-Davila C., Renno Jean-François. (2020). Threatened fish spawning area revealed by specific metabarcoding identification of eggs and larvae in the Beni River, upper Amazon. Global Ecology and Conservation, 24, e01309 [11 p.]. ISSN 2351-9894.
Identifiant IRD : fdi:010080660 -
Mohamed M., Dang Nguyet Thi-Minh, Ogyama Y., Burlet N., Mugat B., Boulesteix M., Merel V., Veber P., Salces-Ortiz J., Severac D., Pelisson A., Vieira C., Sabot François, Fablet M., Chambeyron S. (2020). A transposon story : from TE content to TE dynamic invasion of Drosophila genomes using the single-molecule sequencing technology from Oxford Nanopore. Cells, 9 (8), 1776 [23p.].
Identifiant IRD : fdi:010079692 -
Muscarella R., Emilio T., Phillips O. L., Lewis S. L., Slik F., Baker W. J., Couvreur Thomas, Eiserhardt W. L., Svenning J. C., et al. (2020). The global abundance of tree palms. Global Ecology and Biogeography, 29 (9), p. 1495-1514. ISSN 1466-822X.
Identifiant IRD : fdi:010079396 -
Ndour Papa Mamadou Sitor, Heulin T., Achouak W., Laplaze Laurent, Cournac Laurent. (2020). The rhizosheath : from desert plants adaptation to crop breeding. Plant and Soil, 456 (1-2), 1-13. ISSN 0032-079X.
Identifiant IRD : fdi:010079571 -
Nehbandani A., Soltani A., Hajjarpoor Amir, Dadrasi A., Nourbakhsh F. (2020). Comprehensive yield gap analysis and optimizing agronomy practices of soybean in Iran. Journal of Agricultural Science, 158 (8-9), p. 739-747. ISSN 0021-8596.
Identifiant IRD : fdi:010082084 -
Ngom M., Cissoko M., Gray K., Hocher Valérie, Laplaze Laurent, Sy M.O., Svistoonoff Sergio, Champion Antony. (2020). Establishment of actinorhizal symbiosis in response to ethylene, salicylic acid, and jasmonate. In :
Champion Antony (ed.), Laplaze Laurent (ed.). Jasmonate in plant biology : methods and protocols. New York : Humana Press, 117-130. (Methods in Molecular Biology). ISBN 978-1-0716-0141-9.
Identifiant IRD : fdi:010082338 -
Nguyen T. H., To Thi Mai H., Moukouanga Daniel, Lebrun Michel, Bellafiore Stéphane, Champion Antony. (2020). CRISPR/Cas9-mediated gene editing of the jasmonate biosynthesis OsAOC gene in rice. In :
Champion Antony (ed.), Laplaze Laurent (ed.). Jasmonate in plant biology : methods and protocols. New York : Humana Press, 199-209. (Methods in Molecular Biology). ISBN 978-1-0716-0141-9.
Identifiant IRD : fdi:010082340 -
Olodo K. F., Barnaud Adeline, Kane N. A., Mariac Cédric, Faye A., Couderc Marie, Zekraoui Leila, Dequincey Anaïs, Diouf D., Vigouroux Yves, Berthouly Cécile. (2020). Abandonment of pearl millet cropping and homogenization of its diversity over a 40 year period in Senegal. PLoS One, 15 (9), e0239123 [18p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010079765 -
Orozco-Arias S., Pina J. S., Tabares-Soto R., Castillo-Ossa L. F., Guyot Romain, Isaza G. (2020). Measuring performance metrics of machine learning algorithms for detecting and classifying transposable elements. Processes, 8 (6), p. art. 638 [18p.].
Identifiant IRD : fdi:010079425 -
Orozco-Arias S., Tobon-Orozco N., Pina J. S., Jimenez-Varon C. F., Tabares-Soto R., Guyot Romain. (2020). TIP_finder : an HPC software to detect transposable element insertion polymorphisms in large genomic datasets. Biology, 9 (9), p. 281 [17 p.].
Identifiant IRD : fdi:010079857 -
Ortiz J. P. A., Pupilli F., Acuna C. A., Leblanc Olivier, Pessino S. C. (2020). How to become an apomixis model : the multifaceted case of Paspalum. Genes, 11 (9), p. 974 [27 p.].
Identifiant IRD : fdi:010079882 -
Pettinelli J. D., Soares B. D., Collin Myriam, Mansur E. A., Engelmann Florent, Gagliardi R. F. (2020). Cryotolerance of somatic embryos of guinea (Petiveria alliacea) to V-cryoplate technique and histological analysis of their structural integrity. Acta Physiologiae Plantarum, 42 (3), p. art. 40 [10 p.]. ISSN 0137-5881.
Identifiant IRD : fdi:010078013 -
Picart-Picolo A., Grob S., Picault N., Franek M., Llauro C., Halter T., Maier T. R., Jobet E., Descombin J., Zhang P. P., Paramasivan V., Baum T. J., Navarro L., Dvorackova M., Mirouze Marie, Pontvianne F. (2020). Large tandem duplications affect gene expression, 3D organization, and plant-pathogen response. Genome Research, 30 (11), p. 1583-1592. ISSN 1088-9051.
Identifiant IRD : fdi:010080013 -
Pidon H., Chéron Sophie, Ghesquière Alain, Albar Laurence. (2020). Allele mining unlocks the identification of RYMV resistance genes and alleles in African cultivated rice. BMC Plant Biology, 20 (1), art. 222 [14 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010078115 -
Prentout D., Razumova O., Rhoné Bénédicte, Badouin H., Henri H., Feng C., Kafer J., Karlov G., Marais G. A. B. (2020). An efficient RNA-seq-based segregation analysis identifies the sex chromosomes of Cannabis sativa. Genome Research, 30 (2), p. 164-172. ISSN 1088-9051.
Identifiant IRD : fdi:010077953 -
Pushpavalli R., Berger J. D., Turner N. C., Siddique K. H. M., Colmer T. D., Vadez Vincent. (2020). Cross-tolerance for drought, heat and salinity stresses in chickpea (Cicer arietinum L.). Journal of Agronomy and Crop Science, 206 (3), 405-419. ISSN 0931-2250.
Identifiant IRD : fdi:010077908 -
Rhoné Bénédicte, Defrance Dimitri, Berthouly Cécile, Mariac Cédric, Cubry Philippe, Couderc Marie, Dequincey Anaïs, Assoumanne A., Kane N. A., Sultan Benjamin, Barnaud Adeline, Vigouroux Yves. (2020). Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration. Nature Communications, 11 (1), 5274 [9 p.]. ISSN 2041-1723.
Identifiant IRD : fdi:010079949 -
Rimlinger A., Marie L., Avana M. L., Bouka G. U. D., Zekraoui Leila, Mariac Cédric, Carrière Stéphanie M., Duminil Jérôme. (2020). New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa. Molecular Biology Reports, 47 (3), 2391-2396. ISSN 0301-4851.
Identifiant IRD : fdi:010077873 -
Rimlinger A., Raharimalala N., Letort V., Rakotomalala J. J., Crouzillat D., Guyot Romain, Hamon Perla, Sabatier S. (2020). Phenotypic diversity assessment within a major ex situ collection of wild endemic coffees in Madagascar. Annals of Botany, 126 (5), p. 849-863. ISSN 0305-7364.
Identifiant IRD : fdi:010080405 -
Rose T. J., Welling M. T., Julia C. C., Jeong Kwanho, Tong C., Waters D. L. E., Liu L. (2020). Accumulation of phytate and starch lysophospholipids in rice grains and responses to alterations in P supply or source-sink relations. Journal of Cereal Science, 91, p. art. 102896 [7 p.]. ISSN 0733-5210.
Identifiant IRD : fdi:010077946 -
Sallon S., Cherif Emira, Chabrillange Nathalie, Solowey E., Gros-Balthazard M., Ivorra S., Terral J. F., Egli M., Aberlenc Frédérique. (2020). Origins and insights into the historic Judean date palm based on genetic analysis of germinated ancient seeds and morphometric studies. Science Advances, 6 (6), p. eaax0384 [10 p.]. ISSN 2375-2548.
Identifiant IRD : fdi:010077927 -
Sinclair T. R., Soltani A., Marrou H., Ghanem M., Vadez Vincent. (2020). Geospatial assessment for crop physiological and management improvements with examples using the simple simulation model. Crop Science, 60 (2), p. 700-708. ISSN 0011-183X.
Identifiant IRD : fdi:010079107 -
Sivasakthi K., Tharanya M., Zaman-Allah M., Kholova J., Thirunalasundari T., Vadez Vincent. (2020). Transpiration difference under high evaporative demand in chickpea (Cicer arietinumL.) may be explained by differences in the water transport pathway in the root cylinder. Plant Biology, 22 (5), 769-780. ISSN 1435-8603.
Identifiant IRD : fdi:010079355 -
Soltani A., Alimagham S. M., Nehbandani A., Torabi B., Zeinali E., Dadrasi A., Zand E., Ghassemi S., Pourshirazi S., Alasti O., Hosseini R. S., Zahed M., Arabameri R., Mohammadzadeh Z., Rahban S., Kamari H., Fayazi H., Mohammadi S., Keramat S., Vadez Vincent, Van Ittersum M. K., Sinclair T. R. (2020). SSM-iCrop2 : a simple model for diverse crop species over large areas. Agricultural Systems, 182, art. 102855 [7 p.]. ISSN 0308-521X.
Identifiant IRD : fdi:010078183 -
Soltani A., Alimagham S. M., Nehbandani A., Torabi B., Zeinali E., Zand E., Ghassemi S., Vadez Vincent, Sinclair T. R., van Ittersum M. K. (2020). Modeling plant production at country level as affected by availability and productivity of land and water. Agricultural Systems, 183, p. art. 102859 [10 p.]. ISSN 0308-521X.
Identifiant IRD : fdi:010078184 -
Soltani A., Alimagham S. M., Nehbandani A., Torabi B., Zeinali E., Zand E., Vadez Vincent, van Loon M. P., van Ittersum M. K. (2020). Future food self-sufficiency in Iran : a model-based analysis. Global Food Security : Agriculture Policy Economics and Environment, 24, p. art. 100351 [9 p.]. ISSN 2211-9124.
Identifiant IRD : fdi:010079079 -
Stavrinides A. K., Dussert Stéphane, Combes Marie-Christine, Fock-Bastide I., Severac D., Minier J., Bastos-Siqueira A., Demolombe V., Hem S., Lashermes Philippe, Joët Thierry. (2020). Seed comparative genomics in three coffee species identify desiccation tolerance mechanisms in intermediate seeds. Journal of Experimental Botany, 71 (4), p. 1418-1433. ISSN 0022-0957.
Identifiant IRD : fdi:010078007 -
Welker C. A. D., McKain M. R., Estep M. C., Pasquet Rémy, Chipabika G., Pallangyo B., Kellogg E. A. (2020). Phylogenomics enables biogeographic analysis and a new subtribal classification of Andropogoneae (Poaceae-Panicoideae). Journal of Systematics and Evolution, 58 (6), 1003-1030. ISSN 1674-4918.
Identifiant IRD : fdi:010080489 -
Wousla E. N., Andargie M., Pasquet Rémy, Mondon M., Menez V., Cochin C., Paul L., Pardon L., Roubaud M. (2020). Is bigger better ? Apidae (Xylocopinae), megachilidae and cowpea (Vigna unguiculata) pollination. Plant Breeding, 139 (1), 156-166. ISSN 0179-9541.
Identifiant IRD : fdi:010077133 -
Wu S. Y., Guyot Romain, Bocs S., Droc G., Oktavia F., Hu S. N., Tang C. R., Montoro P., Leclercq J. (2020). Structural and functional annotation of transposable elements revealed a potential regulation of genes involved in rubber biosynthesis by TE-derived siRNA interference in Hevea brasiliensis. International Journal of Molecular Sciences, 21 (12), 4220 [21 p.].
Identifiant IRD : fdi:010079380 -
Yerima Arib, Achigan-Dako E. G., Aissata M., Sekloka E., Billot C., Adje C. O. A., Barnaud Adeline, Bakasso Y. (2020). Agromorphological characterization revealed three phenotypic groups in a region-wide germplasm of fonio (Digitaria exilis (Kippist) Stapf) from West Africa. Agronomy, 10 (11), p. 1653 [19 p.].
Identifiant IRD : fdi:010080008 -
Yogom B. T., Avana-Tientcheu M. L., Mboujda M. F. M., Momo S. T., Fonkou T., Tsobeng A., Barnaud Adeline, Duminil Jérôme. (2020). Ethnicity differences in uses and management practices of bitter kola trees (Garcinia kola) in Cameroon. Economic Botany, 74 (4), 429-444. ISSN 0013-0001.
Identifiant IRD : fdi:010079937 -
Zhou Y., Chebotarov D., Kudrna D., Llaca V., Lee S., Rajasekar S., Mohammed N., Al-Bader N., Sobel-Sorenson C., Parakkal P., Arbelaez L. J., Franco N., Alexandrov N., Hamilton N. R. S., Leung H., Mauleon R., Lorieux Mathias, Zuccolo A., McNally K., Zhang J. W., Wing R. (2020). A platinum standard pan-genome resource that represents the population structure of Asian rice [Data paper]. Scientific Data, 7 (1), art. 113 [11 p.].
Identifiant IRD : fdi:010078893
Articles
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Adji B.I., Akaffou S.D., Kouassi K.H., Houphouet Y.P., Duminil Jérôme, Sabatier S. (2020). Influence of different environments on germination parameters and seedling morphology in Khaya senegalensis (Desr.) A. Juss (Meliaceae). American Journal of Plant Sciences, 11 (10), 1579-1600. ISSN 2158-2742.
Identifiant IRD : fdi:010083757 -
Aubertin Catherine, Pham Jean-Louis. (2020). Le report de la COP15 : une opportunité pour repenser le mécanisme d'accès aux ressources génétiques et de partage des avantages. Ecologie et Politique, 61, 163-170. ISSN 1166-3030.
Identifiant IRD : fdi:010080734 -
Larmande Pierre, Djibril K.M. (2020). Enabling a fast annotation process with the Table2Annotation tool. Genomics and Informatics, 18 (2), e19 [p. 42-47]. ISSN 2234-0742.
Identifiant IRD : fdi:010084041 -
Tisné S., Denis M., Domonhédo H., Pallas B., Cazemajor M., Tranbarger Timothy, Morcillo F. (2020). Environmental and trophic determinism of fruit abscission and outlook with climate change in tropical regions. Plant-Environment Interactions, 1 (1), 17-28. ISSN 2575-6265.
Identifiant IRD : fdi:010078638 -
Tranbarger Timothy, Tadeo F.R. (2020). Diversity and functional dynamics of fleshy fruit abscission zones. Annual Plant Reviews, 3 (2), p. 151-213. ISSN 2639-3832.
Identifiant IRD : fdi:010078639
Directions d'ouvrages ou de revues
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Champion Antony (ed.), Laplaze Laurent (ed.). (2020). Jasmonate in plant biology : methods and protocols.
New York : Humana Press, 227 p. (Methods in Molecular Biology). ISBN 978-1-0716-0141-9.
Identifiant IRD : fdi:010082337
Chapitres ou parties d'ouvrages
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François O., Cubry Philippe, Burgarella C., Vigouroux Yves. (2020). Coalescent models of demographic history : application to plant domestication. In :
Rajora O.P. (ed.). Population genomics : crop plants. Cham : Springer, 65-85. (Population Genomics). ISBN 978-3-031-63001-9.
Identifiant IRD : fdi:010091488 -
Ghesquière Alain. (2020). Le riz comme bien commun. In :
Agnèse Jean-François (dir.), Dangles Olivier (dir.), Rodary Estienne (dir.), Verdier Valérie (préf.), Sabrié Marie-Lise (ed.), Mourier Thomas (ed.), Lavagne Corinne (ed.), Thivent V. (rédac.). Biodiversité au Sud : recherches pour un monde durable. Marseille : IRD, 60-61. ISBN 978-2-7099-2850-2.
Identifiant IRD : fdi:010080863 -
Ghesquière Alain. (2020). Rice as a common good. In :
Agnèse Jean-François (dir.), Dangles Olivier (dir.), Rodary Estienne (dir.), Verdier Valérie (préf.), Sabrié Marie-Lise (ed.), Mourier Thomas (ed.), Lavagne Corinne (ed.), Thivent V. (rédac.). Biodiversity in the global south : research for a sustainable world. Marseille : IRD, 60-61. ISBN 978-2-7099-2874-8.
Identifiant IRD : fdi:010081872 -
Hamon Serge, Vigouroux Yves. (2020). Gardiens de la diversité agronomique. In :
Agnèse Jean-François (dir.), Dangles Olivier (dir.), Rodary Estienne (dir.), Verdier Valérie (préf.), Sabrié Marie-Lise (ed.), Mourier Thomas (ed.), Lavagne Corinne (ed.), Thivent V. (rédac.). Biodiversité au Sud : recherches pour un monde durable. Marseille : IRD, 58-59. ISBN 978-2-7099-2850-2.
Identifiant IRD : fdi:010080861 -
Hamon Serge, Vigouroux Yves. (2020). Custodians of agricultural diversity. In :
Agnèse Jean-François (dir.), Dangles Olivier (dir.), Rodary Estienne (dir.), Verdier Valérie (préf.), Sabrié Marie-Lise (ed.), Mourier Thomas (ed.), Lavagne Corinne (ed.), Thivent V. (rédac.). Biodiversity in the global south : research for a sustainable world. Marseille : IRD, 58-59. ISBN 978-2-7099-2874-8.
Identifiant IRD : fdi:010081870 -
Monat C., Sabot François. (2020). Pangenomics in crop plants. In :
Rajora O.P. (ed.). Population genomics : crop plants. Cham : Springer, 3-35. (Population Genomics). ISBN 978-3-031-63001-9.
Identifiant IRD : fdi:010091486 -
Pham Jean-Louis. (2020). Le protocole de Nagoya, entre ambition et efficacité. In :
Agnèse Jean-François (dir.), Dangles Olivier (dir.), Rodary Estienne (dir.), Verdier Valérie (préf.), Sabrié Marie-Lise (ed.), Mourier Thomas (ed.), Lavagne Corinne (ed.), Thivent V. (rédac.). Biodiversité au Sud : recherches pour un monde durable. Marseille : IRD, 22-23. ISBN 978-2-7099-2850-2.
Identifiant IRD : fdi:010080827 -
Pham Jean-Louis. (2020). The Nagoya protocol, reconciling ambition with effective action. In :
Agnèse Jean-François (dir.), Dangles Olivier (dir.), Rodary Estienne (dir.), Verdier Valérie (préf.), Sabrié Marie-Lise (ed.), Mourier Thomas (ed.), Lavagne Corinne (ed.), Thivent V. (rédac.). Biodiversity in the global south : research for a sustainable world. Marseille : IRD, 22-23. ISBN 978-2-7099-2874-8.
Identifiant IRD : fdi:010081834 -
Scarcelli Nora. (2020). Population genomics of Organelle genomes in crop plants. In :
Rajora O.P. (ed.). Population genomics : crop plants. Cham : Springer, 37-64. (Population Genomics). ISBN 978-3-031-63001-9.
Identifiant IRD : fdi:010091487
Autres publications, littérature grise
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Silvain J.F. (ed.), Goffaux R. (ed.), Soubelet H. (ed.), Sarrazin F. (ed.), Abbadie L., Albert C., Arpin I., Barot Sébastien, Barthelemey D., Bazile D., Billet P., Boudet C., Charbonnel N., Charmantier A., Dobigny Gauthier, Emperaire Laure, Gaba S., Gaubert Philippe, Gilot-Fromont E., Goffaux R., Grandcolas P., Guégan Jean-François, Jactel H., Laurans Y., Leblan Vincent, Le Gall L., Levrel H., Morand S., Morel J.L., Moutou F., Pham Jean-Louis, Plantard O., Pontier D., Roche Benjamin, Roger F., Sainteny G., Scemama P., Soubeyrand S., Thybaud E., Vittecoq M., Vourc'h G. (2020). Mobilisation de la FRB par les pouvoirs publics français sur les liens entre Covid-19 et biodiversité.
Paris : FRB, 57 p. multigr.
Identifiant IRD : fdi:010083450 -
Silvain J.F. (ed.), Goffaux R. (ed.), Soubelet H. (ed.), Sarrazin F. (ed.), Abbadie L., Albert C., Arpin I., Barot Sébastien, Barthelemey D., Bazile D., Billet P., Boudet C., Charbonnel N., Charmantier A., Dobigny Gauthier, Emperaire Laure, Gaba S., Gaubert Philippe, Gilot-Fromont E., Goffaux R., Grandcolas P., Guégan Jean-François, Jactel H., Laurans Y., Leblan Vincent, Le Gall L., Levrel H., Morand S., Morel J.L., Moutou F., Pham Jean-Louis, Plantard O., Pontier D., Roche Benjamin, Roger F., Sainteny G., Scemama P., Soubeyrand S., Thybaud E., Vittecoq M., Vourc'h G. (2020). The link between Covid-19 and biodiversity : a report commissioned by the french public authorities.
Paris : FRB, 54 p. multigr.
Identifiant IRD : fdi:010085631
2019
Articles référencés dans le Web of Science
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Agnoun Y., Yelome I., Sie M., Albar Laurence, Ghesquière Alain, Silue D. (2019). Resistance of selected Oryza glaberrima landraces and their intra-specific breeding lines to Beninese Rice yellow mottle virus isolates. Crop Protection, 119, p. 172-176. ISSN 0261-2194.
Identifiant IRD : fdi:010075631 -
Aguilar-Cruz A., Grimanelli Daniel, Haseloff J., Arteaga-Vazquez M. A. (2019). DNA methylation in Marchantia polymorpha. New Phytologist, 223 (2), p. 575-581. ISSN 0028-646X.
Identifiant IRD : fdi:010076155 -
Atindehou M., Adeoti K., Loko L. E. Y., Beulé T., Paradis Emmanuel, Djedatin G., Dubreuil Tranchant Christine, Sabot François, Lagnika L., Jaligot E. (2019). MooSciTIC : training of trainers in West African research and higher education. PLOS Biology, 17 (6), e3000312 [11 p.]. ISSN 1544-9173.
Identifiant IRD : fdi:010076187 -
Banda J., Bellande Kevin, von Wangenheim D., Goh T., Guyomarc'h S., Laplaze Laurent, Bennett M. J. (2019). Lateral root formation in Arabidopsis : a well-ordered LRexit. Trends in Plant Science, 24 (9), p. 826-839. ISSN 1360-1385.
Identifiant IRD : fdi:010076612 -
Bertioli D. J., Jenkins J., Clevenger J., Dudchenko O., Gao D. Y., Seijo G., Leal-Bertioli S. C. M., Ren L. H., Farmer A. D., Pandey M. K., Samoluk S. S., Abernathy B., Agarwal G., Ballen-Taborda C., Cameron C., Campbell J., Chavarro C., Chitikineni A., Chu Y., Dash S., El Baidouri M., Guo B. Z., Huang W., Do Kim K., Korani W., Lanciano Sophie, Lui C. G., Mirouze Marie, Moretzsohn M. C., Pham M., Shin J. H., Shirasawa K., Sinharoy S., Sreedasyam A., Weeks N. T., Zhang X. Y., Zheng Z., Sun Z. Q., Froenicke L., Aiden E. L., Michelmore R., Varshney R. K., Holbrook C. C., Cannon E. K. S., Scheffler B. E., Grimwood J., Ozias-Akins P., Cannon S. B., Jackson S. A., Schmutz J. (2019). The genome sequence of segmental allotetraploid peanut Arachis hypogaea. Nature Genetics, 51 (5), p. 877-884 + 3 p. ISSN 1061-4036.
Identifiant IRD : fdi:010075651 -
Bethune Kévin, Mariac Cédric, Couderc Marie, Scarcelli Nora, Santoni S., Ardisson M., Martin J. F., Montufar R., Klein V., Sabot François, Vigouroux Yves, Couvreur Thomas. (2019). Long-fragment targeted capture for long-read sequencing of plastomes. Applications in Plant Sciences, 7 (5), e1243 [13 p.]. ISSN 2168-0450.
Identifiant IRD : fdi:010075713 -
Burgarella Concetta, Barnaud Adeline, Kane N. A., Jankowski F., Scarcelli Nora, Billot C., Vigouroux Yves, Berthouly Cécile. (2019). Adaptive introgression : an untapped evolutionary mechanism for crop adaptation. Frontiers in Plant Science, 10, p. art. 4 [17 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010075125 -
Chabaud M., Fournier J., Brichet L., Abdou-Pavy I., Imanishi L., Brottier Laurent, Pirolles E., Hocher Valérie, Franche Claudine, Bogusz Didier, Wall L. G., Svistoonoff Sergio, Gherbi Hassen, Barker D. G. (2019). Chitotetraose activates the fungal-dependent endosymbiotic signaling pathway in actinorhizal plant species. PLoS One, 14 (10), p. e0223149 [13 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010078060 -
Cheize M., Planquette H. F., Fitzsimmons J. N., Pelleter E., Sherrell R. M., Lambert C., Bucciarelli E., Sarthou G., Le Goff M., Liorzou C., Chéron Sophie, Viollier E., Gayet N. (2019). Contribution of resuspended sedimentary particles to dissolved iron and manganese in the ocean : an experimental study. Chemical Geology, 511, p. 389-415. ISSN 0009-2541.
Identifiant IRD : fdi:010075551 -
Colono C., Ortiz J. P. A., Permingeat H. R., Canada E. D. S., Siena L. A., Spoto N., Galdeano F., Espinoza F., Leblanc Olivier, Pessino S. C. (2019). A plant-specific TGS1 homolog influences gametophyte development in sexual tetraploid Paspalum notatum ovules. Frontiers in Plant Science, 10, p. 1566 [14p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010079940 -
Corporeau C., Huvet A., Pichereau V., Delisle L., Quere C., Dubreuil Tranchant Christine, Artigaud S., Brenner C., Cunha-De Padua M. M., Mazure N. (2019). The oyster Crassostrea gigas, alpha new model against cancer. M S-Medecine Sciences, 35 (5), p. 463-466. ISSN 0767-0974.
Identifiant IRD : fdi:010075740 -
Couvreur Thomas, Helmstetter A. J., Koenen E. J. M., Bethune Kévin, Brandao R. D., Little S. A., Sauquet H., Erkens R. H. J. (2019). Phylogenomics of the major tropical plant family Annonaceae using targeted enrichment of nuclear genes. Frontiers in Plant Science, 9, 1941 [15 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010074890 -
Dagallier Lpmj, Janssens S. B., Dauby Gilles, Blach-Overgaard A., Mackinder B. A., Droissart Vincent, Svenning J. C., Sosef M. S. M., Stevart T., Harris D. J., Sonke B., Wieringa J. J., Hardy O. J., Couvreur Thomas. (2019). Cradles and museums of generic plant diversity across tropical Africa. New Phytologist, 225 (5), p. 2196-2213. ISSN 0028-646X.
Identifiant IRD : fdi:010077383 -
Dubrovsky J. G., Fukaki H., Laplaze Laurent, Laskowski M. (2019). Root branching : from lateral root primordium initiation and morphogenesis to function [Editorial]. Frontiers in Plant Science, 10, p. art. 1462 [3 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010077408 -
Enquist B. J., Feng X., Boyle B., Maitner B., Newman E. A., Jorgensen P. M., Roehrdanz P. R., Thiers B. M., Burger J. R., Corlett R. T., Couvreur Thomas, Dauby Gilles, Donoghue J. C., Foden W., Lovett J. C., Marquet P. A., Merow C., Midgley G., Morueta-Holme N., Neves D. M., Oliveira-Filho A. T., Kraft N. J. B., Park D. S., Peet R. K., Pillet M., Serra-Diaz J. M., Sandel B., Schildhauer M., Simova I., Violle C., Wieringa J. J., Wiser S. K., Hannah L., Svenning J. C., McGill B. J. (2019). The commonness of rarity : global and future distribution of rarity across land plants. Science Advances, 5 (11), p. art. eaaz0414 [13 p.]. ISSN 2375-2548.
Identifiant IRD : fdi:010077419 -
Esposito S., Barteri F., Casacuberta J., Mirouze Marie, Carputo D., Aversano R. (2019). LTR-TEs abundance, timing and mobility in Solanum commersonii and S. tuberosum genomes following cold-stress conditions. Planta, 250 (5), p. 1781-1787. ISSN 0032-0935.
Identifiant IRD : fdi:010077162 -
Faye A., Sine B., Chopart J. L., Grondin Alexandre, Lucas Mikaël, Diedhiou A. G., Gantet Pascal, Cournac Laurent, Ming D., Audebert A., Kane A., Laplaze Laurent. (2019). Development of a model estimating root length density from root impacts on a soil profile in pearl millet (Pennisetum glaucum (L.) R. Br) : application to measure root system response to water stress in field conditions. Plos One, 14 (7), p. e0214182 [18 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010077006 -
Flowers J. M., Hazzouri K. M., Gros-Balthazard M., Mo Z. Y., Koutroumpa K., Perrakis A., Ferrand S., Khierallah H. S. M., Fuller D. Q., Aberlenc Bertossi Frédérique, Fournaraki C., Purugganan M. D. (2019). Cross-species hybridization and the origin of North African date palms. Proceedings of the National Academy of Sciences of the United States of America, 116 (5), p. 1651-1658. ISSN 0027-8424.
Identifiant IRD : fdi:010075156 -
Fustier M. A., Martinez-Ainsworth N. E., Aguirre-Liguori J. A., Venon A., Corti H., Rousselet A., Dumas F., Dittberner H., Camarena M. G., Grimanelli Daniel, Ovaskainen O., Falque M., Moreau L., de Meaux J., Montes-Hernandez S., Eguiarte L. E., Vigouroux Yves, Manicacci D., Tenaillon M. I. (2019). Common gardens in teosintes reveal the establishment of a syndrome of adaptation to altitude. PLoS Genetics, 15 (12), p. e1008512 [34 p.]. ISSN 1553-7404.
Identifiant IRD : fdi:010077903 -
Garot E., Joët Thierry, Combes Marie-Christine, Severac D., Lashermes Philippe. (2019). Plant population dynamics on oceanic islands during the Late Quaternary climate changes : genetic evidence from a tree species (Coffea mauritiana) in Reunion Island. New Phytologist, 224 (2), 974-986. ISSN 0028-646X.
Identifiant IRD : fdi:010076550 -
Garot Edith, Joët Thierry, Combes Marie-Christine, Lashermes Philippe. (2019). Genetic diversity and population divergences of an indigenous tree (Coffea mauritiana) in Reunion Island : role of climatic and geographical factors. Heredity, 122 (6), p. 833-847. ISSN 0018-067X.
Identifiant IRD : fdi:010075689 -
Gendre D., Baral A., Dang X., Esnay N., Boutte Y., Stanislas T., Vain Thomas, Claverol S., Gustavsson A., Lin D. S., Grebe M., Bhalerao R. P. (2019). Rho-of-plant activated root hair formation requires Arabidopsis YIP4a/b gene function. Development, 146 (5), p. dev168559 [7 p.]. ISSN 0950-1991.
Identifiant IRD : fdi:010075474 -
Ghodhbane-Gtari F., Nouioui I., Hezbri K., Lundstedt E., D'Angelo T., McNutt Z., Laplaze Laurent, Gherbi Hassen, Vaissayre Virginie, Svistoonoff Sergio, ben Ahmed H., Boudabous A., Tisa L. S. (2019). The plant-growth-promoting actinobacteria of the genus Nocardia induces root nodule formation in Casuarina glauca. Antonie Van Leeuwenhoek = International Journal of General and Molecular Microbiology, 112 (1), p. 75-90. International Meeting on Frankia and Actinorhizal Plants, 19., Hammamet (TUN), 2018/03/17-19. ISSN 0003-6072.
Identifiant IRD : fdi:010075179 -
Gonin M., Bergougnoux V., Nguyen T. D., Gantet Pascal, Champion Antony. (2019). What makes adventitious roots ?. Plants, 8 (7), p. art. 240 [24 p.].
Identifiant IRD : fdi:010076609 -
Gorel A. P., Duminil Jérôme, Doucet J. L., Fayolle A. (2019). Ecological niche divergence associated with species and populations differentiation in Erythrophleum (Fabaceae, Caesalpinioideae). Plant Ecology and Evolution, 152 (1), p. 41-52. ISSN 2032-3913.
Identifiant IRD : fdi:010075571 -
Guyeux C., Charr J. C., Tran H. T. M., Furtado A., Henry R. J., Crouzillat D., Guyot Romain, Hamon Perla. (2019). Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species. PLOS One, 14 (6), p. e0216347 [20 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010076131 -
Hardy O. J., Delaide B., Hainaut H., Gillet J. F., Gillet P., Kaymak E., Vankerckhove N., Duminil Jérôme, Doucet J. L. (2019). Seed and pollen dispersal distances in two African legume timber trees and their reproductive potential under selective logging. Molecular Ecology, 28 (12), p. 3119-3134. ISSN 0962-1083.
Identifiant IRD : fdi:010076233 -
Harrop T. W. R., Mantegazza Otho, Luong A. M., Bethune Kévin, Lorieux Mathias, Jouannic Stefan, Adam Hélène. (2019). A set of AP2-like genes is associated with inflorescence branching and architecture in domesticated rice. Journal of Experimental Botany, 70 (20), 5617-5629. ISSN 0022-0957.
Identifiant IRD : fdi:010077464 -
Hoang G. T., Dinh L. V., Nguyen T. T., Ta N. K., Gathignol Floran, Mai C. D., Jouannic Stefan, Tran K. D., Khuat T. H., Do V. N., Lebrun Michel, Courtois B., Gantet Pascal. (2019). Genome-wide association study of a panel of vietnamese rice landraces reveals new QTLs for tolerance to water deficit during the vegetative phase. Rice, 12, p. art. 4 [20 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010075158 -
Hoang G. T., Gantet Pascal, Nguyen K. H., Phung N. T. P., Ha L. T., Nguyen T. T., Lebrun Michel, Courtois B., Pham X. H. (2019). Genome-wide association mapping of leaf mass traits in a Vietnamese rice landrace panel. Plos One, 14 (7), p. e0219274 [18 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010077007 -
Jeong Kwanho, Munoz-Bodnar A., Rojas N. A., Poulin L., Rodriguez-R L. M., Gagnevin L., Verniere C., Pruvost O., Koebnik Ralf. (2019). CRISPR elements provide a new framework for the genealogy of the citrus canker pathogen Xanthomonas citri pv. citri. BMC Genomics, 20 (1), p. art. 917 [19 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010077455 -
Juanillas V., Dereeper Alexis, Beaume N., Droc G., Dizon J., Mendoza J. R., Perdon J. P., Mansueto L., Triplett L., Lang J., Zhou G., Ratharanjan K., Plale B., Haga J., Leach J. E., Ruiz M., Thomson M., Alexandrov N., Larmande Pierre, Kretzschmar T., Mauleon R. P. (2019). Rice Galaxy : an open resource for plant science. Gigascience, 8 (5), p. giz028 [14 p.]. ISSN 2047-217X.
Identifiant IRD : fdi:010076213 -
Klafack S., Fiston-Lavier A. S., Bergmann S. M., Hammoumi S., Schroder L., Fuchs W., Lusiastuti A., Lee P. Y., Heredia S. V., Gosselin-Grenet A. S., Avarre Jean-Christophe, Amoyal C., Amraoui H., Bigourdan A., Boujandir I., Bueno O., Cotteux B., de San Nicolas N., Delattre R., Diouf M. B., Dussaut R., Gawron K., Imbert J. B., Mouilhi H., Nifaut E., Pages A., Platon L., Sanchez S., Simon L., Sobry H., Souche M., Taillefer B., Guemgne E. N., Sacchi O., Diouf A., Ouzerdine A. L., Durand F., Brooke J., Cremaschi J., Massaviol M., Hamouma M., Salma M., Soulie M., Delorme Q., Virgoulay T., Klein Valentin, Antoine Y., Berne A., Gaal C., Master Student Consortium. (2019). Cyprinid herpesvirus 3 evolves in vitro through an assemblage of haplotypes that alternatively become dominant or under-represented. Viruses, 11 (8), p. art. 754 [12 p.].
Identifiant IRD : fdi:010076640 -
Lavarenne J., Gonin M., Guyomarc'h S., Rouster J., Champion Antony, Sallaud C., Laplaze Laurent, Gantet Pascal, Lucas Mikaël. (2019). Inference of the gene regulatory network acting downstream of CROWN ROOTLESS 1 in rice reveals a regulatory cascade linking genes involved in auxin signaling, crown root initiation, and root meristem specification and maintenance. Plant Journal, 100 (5), 954-968. ISSN 0960-7412.
Identifiant IRD : fdi:010077032 -
Lissambou B. J., Couvreur Thomas, Atteke C., Stévart T., Pineiro R., Dauby Gilles, Monthe F. K., Ikabanga D. U., Sonké B., M'Batchi B., Hardy O. J. (2019). Species delimitation in the genus Greenwayodendron based on morphological and genetic markers reveals new species. Taxon, 68 (3), p. 442-454. ISSN 0040-0262.
Identifiant IRD : fdi:010077948 -
Loiseau O., Oliyares I., Paris M., de La Harpe M., Weigand A., Koubinova D., Rolland J., Bacon C. D., Balslev H., Borchsenius F., Cano A., Couvreur Thomas, Delnatte C., Fardin F., Gayot M., Mejia F., Mota-Machado T., Ferret M., Roncal J., Sanin M. J., Stauffer F., Lexer C., Kessler M., Salamin N. (2019). Targeted capture of hundreds of nuclear genes unravels phylogenetic relationships of the diverse neotropical palm tribe Geonomateae. Frontiers in Plant Science, 10, p. art. 864 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010076201 -
Magwe-Tindo J., Wieringa J. J., Sonke B., Zapfack L., Vigouroux Yves, Couvreur Thomas, Scarcelli Nora. (2019). Complete plastome sequences of 14 African yam species (Dioscorea spp.). Mitochondrial DNA Part B : Resources, 4 (1), p. 74-76. ISSN 2380-2359.
Identifiant IRD : fdi:010074876 -
Merot-L'anthoene V., Tournebize R., Darracq O., Rattina V., Lepelley M., Bellanger L., Dubreuil Tranchant Christine, Coulee M., Pegard M., Metairon S., Fournier C., Stoffelen P., Janssens S. B., Kiwuka C., Musoli P., Sumirat U., Legnate H., Kambale J. L., Neto J. F. D., Revel C., Kochko Alexandre de, Descombes P., Crouzillat D., Poncet Valérie. (2019). Development and evaluation of a genome-wide Coffee 8.5K SNP array and its application for high-density genetic mapping and for investigating the origin of Coffea arabica L. Plant Biotechnology Journal, 17 (7), p. 1418-1430. ISSN 1467-7644.
Identifiant IRD : fdi:010076130 -
Migliore J., Kaymak E., Mariac Cédric, Couvreur Thomas, Lissambou B., Pineiro R., Hardy O. J. (2019). Pre-Pleistocene origin of phylogeographical breaks in African rain forest trees : new insights from Greenwayodendron (Annonaceae) phylogenomics. Journal of Biogeography, 46 (1), p. 212-223. ISSN 0305-0270.
Identifiant IRD : fdi:010074917 -
Moge Kamga S., Sonké B., Couvreur Thomas. (2019). Raphia vinifera (Arecaceae ; Calamoideae) : misidentified for far too long. Biodiversity Data Journal, 7, art. E37757 [16 p.]. ISSN 1314-2836.
Identifiant IRD : fdi:010076625 -
Monthe F. K., Migliore J., Duminil Jérôme, Bouka G., Demenou B. B., Doumenge C., Blanc-Jolivet C., Ekue M. R. M., Hardy O. J. (2019). Phylogenetic relationships in two African Cedreloideae tree genera (Meliaceae) reveal multiple rain/dry forest transitions. Perspectives in Plant Ecology Evolution and Systematics, 37, p. 1-10. ISSN 1433-8319.
Identifiant IRD : fdi:010075503 -
Neji M., Gorel A., Ojeda D. I., Duminil Jérôme, Kastally C., Steppe K., Fayolle A., Hardy O. J. (2019). Comparative analysis of two sister Erythrophleum species (Leguminosae) reveal contrasting transcriptome-wide responses to early drought stress. Gene, 694, p. 50-62. ISSN 0378-1119.
Identifiant IRD : fdi:010075498 -
Nguyen H. T., To H. T. M., Lebrun Michel, Bellafiore Stéphane, Champion Antony. (2019). Jasmonates : the master regulator of rice development, adaptation and defense. Plants, 8 (9), 339 [19 p.].
Identifiant IRD : fdi:010077082 -
Nguyen K. L., Grondin Alexandre, Courtois B., Gantet Pascal. (2019). Next-generation sequencing accelerates crop gene discovery. Trends in Plant Science, 24 (3), p. 263-274. ISSN 1360-1385.
Identifiant IRD : fdi:010075288 -
Nti-Addae Y., Matthews D., Ulat V. J., Syed R., Sempere G., Petel A., Renner J., Larmande Pierre, Guignon V., Jones E., Robbins K. (2019). Benchmarking database systems for genomic selection implementation. Database, p. baz096 [10p.]. ISSN 1758-0463.
Identifiant IRD : fdi:010077059 -
Olodo K. F., Gueye M. C., Calatayud C., Diop B. M., Kane N. A., Ngom A., Ntui V. O., Barreto M. M. S., Uyoh E. A., Abraham S., Vigouroux Yves, Billot C., Barnaud Adeline. (2019). EST-SSR development for Digitaria exilis and its relatives D. iburua and D. longiflora from transcriptome sequences. Plant Genetic Resources, 17 (3), p. 280-284. ISSN 1479-2621.
Identifiant IRD : fdi:010075611 -
Onstein R. E., Kissling W. D., Chatrou L. W., Couvreur Thomas, Morlon H., Sauquet H. (2019). Which frugivory-related traits facilitated historical long-distance dispersal in the custard apple family (Annonaceae) ?. Journal of Biogeography, 46 (8), p. 1874-1888. ISSN 0305-0270.
Identifiant IRD : fdi:010076522 -
Ortiz J. P. A., Leblanc Olivier, Rohr C., Grisolia M., Siena L. A., Podio M., Colono C., Azzaro C., Pessino S. C. (2019). Small RNA-seq reveals novel regulatory components for apomixis in Paspalum notatum. BMC Genomics, 20, p. art. 487 [17 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010076112 -
Rimlinger A., Carrière Stéphanie M., Avana M. L., Nguegang A., Duminil Jérôme. (2019). The influence of farmers' strategies on local practices, knowledge, and varietal diversity of the safou tree (Dacryodes edulis) in Western Cameroon. Economic Botany, 73 (2), p. 249-264. ISSN 0013-0001.
Identifiant IRD : fdi:010076490 -
Roscoe T. J., Vaissayre Virginie, Paszkiewicz G., Clavijo F., Kelemen Z., Michaud Caroline, Lepiniec L., Dubreucq B., Zhou D. X., Devic M. (2019). Regulation of FUSCA3 expression during seed development in Arabidopsis. Plant and Cell Physiology, 60 (2), p. 476-487. ISSN 0032-0781.
Identifiant IRD : fdi:010075275 -
Scarcelli Nora, Cubry Philippe, Akakpo R., Thuillet Anne-Céline, Obidiegwu J., Baco M. N., Otoo E., Sonke B., Dansi A., Djedatin G., Mariac Cédric, Couderc Marie, Causse S., Alix K., Chair H., Francois O., Vigouroux Yves. (2019). Yam genomics supports West Africa as a major cradle of crop domestication. Science Advances, 5 (5), p. eaaw1947 [7 p.]. ISSN 2375-2548.
Identifiant IRD : fdi:010076071 -
Scheben A., Chan C. K. K., Mansueto L., Mauleon R., Larmande Pierre, Alexandrov N., Wing R. A., McNally K. L., Quesneville H., Edwards D. (2019). Progress in single-access information systems for wheat and rice crop improvement. Briefings in Bioinformatics, 20 (2), p. 565-571. ISSN 1467-5463.
Identifiant IRD : fdi:010076165 -
Selby P., Abbeloos R., Backlund J. E., Salido M. B., Bauchet G., Benites-Alfaro O. E., Birkett C., Calaminos V. C., Carceller P., Cornut G., Costa B. V., Edwards J. D., Finkers R., Gao S. Y., Ghaffar M., Glaser P., Guignon V., Hok P., Kilian A., Koenig P., Lagare J. E. B., Lange M., Laporte M. A., Larmande Pierre, LeBauer D. S., Lyon D. A., Marshall D. S., Matthews D., Milne I., Mistry N., Morales N., Mueller L. A., Neveu P., Papoutsoglou E., Pearce B., Perez-Masias I., Pommier C., Ramirez-Gonzalez R. H., Rathore A., Raquel A. M., Raubach S., Rife T., Robbins K., Rouard M., Sarma C., Scholz U., Sempere G., Shaw P. D., Simon R., Soldevilla N., Stephen G., Sun Q., Tovar C., Uszynski G., Verouden M., BrAPI consortium. (2019). BrAPI-an application programming interface for plant breeding applications. Bioinformatics, 35 (20), p. 4147-4155. ISSN 1367-4803.
Identifiant IRD : fdi:010077403 -
Sempéré G., Pétel A., Rouard M., Frouin J., Hueber Y., De Bellis F., Larmande Pierre. (2019). Gigwa v2-Extended and improved genotype investigator. Gigascience, 8 (5), p. giz051 [9 p.]. ISSN 2047-217X.
Identifiant IRD : fdi:010076214 -
Seyfferth C., Wessels B. A., Gorzsas A., Love J. W., Ruggeberg M., Delhomme N., Vain Thomas, Antos K., Tuominen H., Sundberg B., Felten J. (2019). Ethylene signaling is required for fully functional tension wood in hybrid aspen. Frontiers in Plant Science, 10, p. art. 1101 [17 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010077045 -
Stevart T., Dauby Gilles, Lowry P. P., Blach-Overgaard A., Droissart Vincent, Harris D. J., Mackinder B. A., Schatz G. E., Sonke B., Sosef M. S. M., Svenning J. C., Wieringa J. J., Couvreur Thomas. (2019). A third of the tropical African flora is potentially threatened with extinction. Science Advances, 5 (11), p. eaax9444 [13 p.]. ISSN 2375-2548.
Identifiant IRD : fdi:010077420 -
To H. T. M., Nguyen H. T., Dang N. T. M., Nguyen N. H., Bui T. X., Lavarenne J., Phung N. T. P., Gantet Pascal, Lebrun Michel, Bellafiore Stéphane, Champion Antony. (2019). Unraveling the genetic elements involved in shoot and root growth regulation by jasmonate in rice using a genome-wide association study. Rice, 12 (1), p. art. 69 [18 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010076668 -
Toniutti L., Breitler J. C., Guittin C., Doulbeau Sylvie, Etienne H., Campa Claudine, Lambot C., Herrera Pinilla J. C., Bertrand B. (2019). An altered circadian clock coupled with a higher photosynthesis efficiency could explain the better agronomic performance of a new coffee clone when compared with a standard variety. International Journal of Molecular Sciences, 20 (3), 736 [19 p.]. ISSN 1422-0067.
Identifiant IRD : fdi:010075512 -
Torres L. F., Reichel T., Dechamp E., de Aquino S. O., Duarte K. E., Alves G. S. C., Silva A. T., Cotta M. G., Costa T. S., Diniz L. E. C., Breitler J. C., Collin Myriam, Paiva L. V., Andrade A. C., Etienne H., Marraccini P. (2019). Expression of DREB-like genes in Coffea canephora and C. arabica subjected to various types of abiotic stress. Tropical Plant Biology, 12 (2), p. 98-116. ISSN 1935-9756.
Identifiant IRD : fdi:010076088 -
Toublanc-Lambault O., Pouteau Robin, Davezies M., Marron M., Pain A., Fogliani B., Marmey Philippe. (2019). Environmental correlates for seed desiccation sensitivity of New Caledonian plant species. Pacific Science, 73 (2), p. 231-248. ISSN 0030-8870.
Identifiant IRD : fdi:010077444 -
Tournebize Rémi, Poncet Valérie, Jakobsson M., Vigouroux Yves, Manel S. (2019). McSwan : a joint site frequency spectrum method to detect and date selective sweeps across multiple population genomes. Molecular Ecology Resources, 19 (1), p. 283-295. ISSN 1755-098X.
Identifiant IRD : fdi:010075149 -
Tranbarger Timothy, Domonhedo H., Cazemajor M., Dubreuil C., Fischer U., Morcillo F. (2019). The PIP Peptide of inflorescence deficient in abscission enhances populus leaf and Elaeis guineensis fruit abscission. Plants, 8 (6), art. 143 [8 p.]. ISSN 2223-7747.
Identifiant IRD : fdi:010076204 -
Trinh D. C., Lavenus J., Goh T., Boutte Y., Drogue Q., Vaissayre Virginie, Tellier F., Lucas Mikaël, Voss U., Gantet Pascal, Faure J. D., Dussert Stéphane, Fukaki H., Bennet M. J., Laplaze Laurent, Guyomarc'h S. (2019). PUCHI regulates very long chain fatty acid biosynthesis during lateral root and callus formation. Proceedings of the National Academy of Sciences of the United States of America, 116 (28), p. 14325-14330. ISSN 0027-8424.
Identifiant IRD : fdi:010076216 -
Varshney R. K., Thudi M., Roorkiwal M., He W. M., Upadhyaya H. D., Yang W., Bajaj P., Cubry Philippe, Rathore A., Jian J. B., Doddamani D., Khan A. W., Garg V., Chitikineni A., Xu D. W., Gaur P. M., Singh N. P., Chaturvedi S. K., Nadigatla Gvpr, Krishnamurthy L., Dixit G. P., Fikre A., Kimurto P. K., Sreeman S. M., Bharadwaj C., Tripathi S., Wang J., Lee S. H., Edwards D., Polavarapu K. K. B., Penmetsa R. V., Crossa J., Nguyen H. T., Siddique K. H. M., Colmer T. D., Sutton T., von Wettberg E., Vigouroux Yves, Xu X., Liu X. (2019). Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics, 51 (5), p. 857-864. ISSN 1061-4036.
Identifiant IRD : fdi:010075648 -
Vergnes Baptiste, Gazanion Elodie, Mariac Cédric, Du Manoir M., Sollelis L., Lopez-Rubio J. J., Sterkers Y., Banuls Anne-Laure. (2019). A single amino acid substitution (H451Y) in Leishmania calcium-dependent kinase SCAMK confers high tolerance and resistance to antimony. Journal of Antimicrobial Chemotherapy, 74 (11), p. 3231-3239. ISSN 0305-7453.
Identifiant IRD : fdi:010077350 -
Vignal A., Boitard S., Thebault N., Dayo G. K., Yapi-Gnaore V., Karim I. Y. A., Berthouly Cécile, Palinkas-Bodzsar N., Guemene D., Thibaud-Nissen F., Warren W. C., Tixier-Boichard M., Rognon X. (2019). A guinea fowl genome assembly provides new evidence on evolution following domestication and selection in galliformes. Molecular Ecology Resources, 19 (4), p. 997-1014. ISSN 1755-098X.
Identifiant IRD : fdi:010076128 -
Zhong C. L., Zhang Y., Wei Y. C., Meng J. X., Chen Y., Bush D., Bogusz Didier, Franche Claudine. (2019). The role of Frankia inoculation in casuarina plantations in China. Antonie Van Leeuwenhoek = International Journal of General and Molecular Microbiology, 112 (1), p. 47-56. International Meeting on Frankia and Actinorhizal Plants, 19., Hammamet (TUN), 2018/03/17-19. ISSN 0003-6072.
Identifiant IRD : fdi:010075172
Articles
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Dubreuil Tranchant Christine, Rouard M., Sabot François. (2019). Plant pangenome : impacts on phenotypes and evolution. Annual Plant Reviews, 2 (2), en ligne [25 p.]. ISSN 2639-3832.
Identifiant IRD : fdi:010080165 -
Larmande Pierre, Huy Do, Yue Wang. (2019). OryzaGP : rice gene and protein dataset for named-entity recognition. Genomics and Informatics, 17 (2), e17 [3 p.]. ISSN 2234-0742.
Identifiant IRD : fdi:010084042 -
Montufar R., Couvreur Thomas, Espinosa S., Escobar S., Tranbarger Timothy. (2019). Diversity, ecology and ethnobotany of the palms of the Yasuni national park (Ecuador). Palms, 63 (1), p. 11-22.
Identifiant IRD : fdi:010078647 -
Poncet Valérie, Birnbaum P., Burtet-Sarramegna V., Kochko Alexandre de, Fogliani B., Gâteblé G., Isnard Sandrine, Jaffré Tanguy, Job D., Munoz F., Munzinger Jérôme, Scutt C.P., Tournebize R., Trueba S., Pillon Yohan. (2019). Amborella : bearing witness to the past ?. Annual Plant Reviews, 2 (3), 41 p. ISSN 2639-3832.
Identifiant IRD : fdi:010076886
Directions d'ouvrages ou de revues
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Sabrié Marie-Lise (dir.), Mourier Thomas (dir.), Lavagne Corinne (dir.), Thivent V., Guérin Isabelle (contrib.), Roubaud François (contrib.), Guilmoto Christophe (contrib.), Razafindrakoto Mireille (contrib.), Pilon Marc (contrib.), Léglise Isabelle (contrib.), Le Meur Pierre-Yves (contrib.), Ouattara Fatoumata (contrib), Seignobos Christian (contrib.), Chauveau Jean-Pierre (contrib.), Léonard Eric (contrib.), Guillaud Dominique (contrib.), Froment Alain (contrib.), Robin Nelly (contrib.), Agier Michel (contrib.), Bava Sophie (contrib.), Desgrées du Loû Annabel (contrib.), Gubert Flore (contrib.), Delaporte E. (contrib.), Jourdain Gonzague (contrib.), Dumont Alexandre (contrib.), Trèche Serge (contrib.), Berger Jacques (contrib.), Traissac Pierre (contrib.), Delaunay Valérie (contrib.), Robert Vincent (contrib.), Darriet Frédéric (contrib.), Sokhna Cheikh (contrib.), Cot Michel (contrib.), Peeters Martine (contrib.), Leroy Eric (contrib.), Desclaux Alice (contrib.), Hougard Jean-Marc (contrib.), Paugy Didier (contrib.), Boussinesq Michel (contrib.), Solano Philippe (contrib.), Missé Dorothée (contrib.), Gouagna Louis-Clément (contrib.), Lemesre Jean-Loup (contrib.), Banuls Anne-Laure (contrib.), Menkes Christophe (contrib.), Mangeas Morgan (contrib.), Sultan Benjamin (contrib.), Condom Thomas (contrib.), Gosset Marielle (contrib.), Janicot Serge (contrib.), Nocquet Jean-Mathieu (contrib.), Le Pennec Jean-Luc (contrib.), Hardy Sébastien (contrib.), Charvis Philippe (contrib.), Hello Yann (contrib.), Bonnet Emmanuel (contrib.), Strady Emilie (contrib.), Point David (contrib.), Ollivier Bernard (contrib.), Biegala Isabelle (contrib.), Feller Christian (contrib.), Valentin Christian (contrib.), Giraud Eric (contrib.), Blanchart Eric (contrib.), Montoroi Jean-Pierre (contrib.), Cecchi Philippe (contrib.), Albergel Jean (contrib.), Vouillamoz Jean-Michel (contrib.), Simonneaux Vincent (contrib.), Boulet Gilles (contrib.), Ruf Thierry (contrib.), Michon Geneviève (contrib.), Boutrais Jean-Baptiste (contrib.), Emperaire Laure (contrib.), Duponnois Robin (contrib.), Boulanger Jean-Philippe (contrib.), Hébrard Eugénie (contrib.), Verdier Valérie (contrib.), Szurek Boris (contrib.), Le Rü Bruno (contrib.), Calatayud Paul-André (contrib.), Dangles Olivier (contrib.), Aberlenc Frédérique (contrib.), Roussos Sevastianos (contrib.), Dobigny Gauthier (contrib.), Legendre Marc (contrib.), Gaertner Daniel (contrib.), Chavance Pierre (contrib.), Bach Pascal (contrib.), Bertrand Arnaud (contrib.), Vialard Jérôme (contrib.), Merle Jacques (contrib.), Voituriez Bruno (contrib.), Bourles Bernard (contrib.), Penven Pierrick (contrib.), Lebel Thierry (contrib.), Mahé Gil (contrib.), Descroix Luc (contrib.), Chevallier Pierre (contrib.), Calmant Stéphane (contrib.), Turcq Bruno (contrib.), Favreau Adrien (contrib.), Rajot Jean-Louis (contrib.), Pélissier Raphaël (contrib.), Cury Philippe (contrib.), Rodolfo-Metalpa Riccardo (contrib.), Tricornot Hervé de (contrib.), Simard Frédéric (contrib.), Etard Jean-François (contrib.), Taverne Bernard (contrib.), Fournet Florence (contrib.), Drogoul Alexis (contrib), Souris Marc (contrib.), Simier Monique (contrib.), Bonnin Marie (contrib.), Ghesquière Alain (contrib.), Hamon Serge (contrib.), Vigouroux Yves (contrib.), Gonzalez Sophie (contrib.), Molino Jean-François (contrib.), Bourdy Geneviève (contrib.), Moretti Christian (contrib.), Ottino Garanger Pierre (contrib.), Valdez Francisco (contrib.), Antheaume Benoît (contrib.), Gratiot Nicolas (contrib.). (2019). Science et développement durable : 75 ans de recherche au Sud.
Marseille : IRD, 224 p. ISBN 978-2-7099-2737-6.
Identifiant IRD : fdi:010075823
Ouvrages
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De Aquino S.O., Tournebize R., Marraccini P., Mariac Cédric, Couderc Marie, Bethune Kevin, Cubry Philippe, Andrade A.C., Darracq O., Lepelley M., Crouzillat D., Kiwuka C., Anten N., Manel S., François O., Vigouroux Yves, Kochko Alexandre de, Poncet Valérie. (2019). Genotipagem por enriquecimento e captura direcionada de genes candidatos em Coffea canephora.
en ligne [6 p.]. (Anais do Simpósio de Pesquisa dos Cafés do Brasil ; 10). Simposio de Pesquisa dos Cafés do Brasil, 10., Vitória (BRA), 2019/10/8-10. ISSN 1984-9249.
Identifiant IRD : fdi:010078353 -
De Aquino S.O., Tournebize R., Marraccini P., Mariac Cédric, Couderc Marie, Bethune Kevin, Cubry Philippe, Andrade A.C., Darracq O., Lepelley M., Crouzillat D., Kiwuka C., Anten N., Manel S., François O., Vigouroux Yves, Kochko Alexandre de, Poncet Valérie. (2019). Potencial adaptativo de Coffea canephora para projeções das alterações climáticas.
en ligne [6 p.]. (Anais do Simpósio de Pesquisa dos Cafés do Brasil ; 10). Simposio de Pesquisa dos Cafés do Brasil, 10., Vitória (BRA), 2019/10/08-10. ISSN 1984-9249.
Identifiant IRD : fdi:010078354
Chapitres ou parties d'ouvrages
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Aberlenc Frédérique (contrib.), Thivent V. (2019). Sexer pour développer le dattier. In :
Sabrié Marie-Lise (dir.), Mourier Thomas (dir.), Lavagne Corinne (dir.). Science et développement durable : 75 ans de recherche au Sud. Marseille : IRD, p. 145. ISBN 978-2-7099-2737-6.
Identifiant IRD : fdi:010089269 -
Cubry Philippe, Vigouroux Yves. (2019). Population genomics of crop domestication : current state and perspectives. In :
Rajora O.P. (ed.). Population genomics : concepts, approaches and applications. Cham : Springer, 685-707. (Population Genomics). ISBN 978-3-030-04587-6.
Identifiant IRD : fdi:010088356 -
Garine E., Barnaud Adeline, Raimond C. (2019). Growing a shared landscape : plants and humans over generations among the Duupa farmers of northern Cameroon. In :
Hybrid communities : biosocial approaches to domestication and other trans-species relationships. Oxon : Routledge, p. 165-178. (Routledge Studies in Anthropology). ISBN 978-1-138-89399-3.
Identifiant IRD : fdi:010073951 -
Ghesquière Alain (contrib.), Thivent V. (2019). Le riz comme bien commun. In :
Sabrié Marie-Lise (dir.), Mourier Thomas (dir.), Lavagne Corinne (dir.). Science et développement durable : 75 ans de recherche au Sud. Marseille : IRD, 198-199. ISBN 978-2-7099-2737-6.
Identifiant IRD : fdi:010089300 -
Hamon Serge (contrib.), Vigouroux Yves (contrib.), Thivent V. (2019). Gardiens de la diversité agronomique. In :
Sabrié Marie-Lise (dir.), Mourier Thomas (dir.), Lavagne Corinne (dir.). Science et développement durable : 75 ans de recherche au Sud. Marseille : IRD, 200-201. ISBN 978-2-7099-2737-6.
Identifiant IRD : fdi:010089301
Thèses, mémoires, diplômes
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Larmande Pierre. (2019). Intégration de données multi-échelles et extraction de connaissances en agronomie : exemples et perspectives.
Montpellier : IRD, 144 p. multigr. HDR. Habilitation à Diriger des Recherches, Univ. de Montpellier. 2019/04/20.
Identifiant IRD : fdi:010075963
Autres publications, littérature grise
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Biegala Isabelle, Dangles Olivier, Hubert Nicolas, Ledru Marie-Pierre, Le Loc'h François, Maeght Jean-Luc, Oberdorff Thierry, Pouilly Marc, Vigouroux Yves, Barot Sébastien. (2019). Pourquoi lier la résolution de la crise de la biodiversité à celle de la crise climatique ?.
Marseille : IRD, 19 p. multigr. (Communauté de Savoirs Biodiversité).
Identifiant IRD : fdi:010087041 -
Brousseau Louise, Fine P.V.A., Dreyer E., Vendramin G.G., Scotti I. (2019). Genomics of microgeographic adaptation in the Amazonian hyperdominant tree Eperua falcata Aubl. (Fabaceae).
en ligne [27 p.]. (BioRxiv ; 312843).
Identifiant IRD : fdi:010076804 -
Gros-Balthazar M., Battesti V., Ivorra S., Paradis L., Aberlenc Frédérique, Zango O., Zehdi S., Moussouni S., Abbas Naqvi S., Newton C., Terral J.F. (2019). Integration of ethnobotany and population genetics uncovers the agrobiodiversity of date palms of Siwa Oasis (Egypt) and their importance to the evolutionary history of the species.
en ligne [46 p.]. (BioRxiv ; 820447).
Identifiant IRD : fdi:010076792
2018
Articles référencés dans le Web of Science
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Agbidinoukoun A., Doussoh A., Soussou Dangou J., Ahanhanzo C., Engelmann Florent. (2018). Used of encapsulation-dehydration technique for short-term preservation of endangered sweet potato (Ipomoea batatas) cultivars [résumé]. In Vitro Cellular and Developmental Biology Plant, 54 (Suppl. 1), p. S40-S41. Quadrennial Congress of the International Association of Plant Biotechnology, 14., Dublin (IRL), 2018/08/19-24. ISSN 1054-5476.
Identifiant IRD : fdi:010073716 -
Arguedas M., Gomez D., Hernandez L., Engelmann Florent, Garramone R., Cejas I., Yabor L., Martinez-Montero M. E., Lorenzo J. C. (2018). Maize seed cryo-storage modifies chlorophyll, carotenoid, protein, aldehyde and phenolics levels during early stages of germination. Acta Physiologiae Plantarum, 40 (6), p. art. 118 [9p.]. ISSN 0137-5881.
Identifiant IRD : fdi:010073034 -
Assoumane A., Blay C., Sanda A. K. A., Mariac Cédric, Pham Jean-Louis, Bezançon Gilles, Vigouroux Yves. (2018). Wild crop relative populations hot-spots of diversity are hot-spots of introgression in the case of pearl millet. Genetic Resources and Crop Evolution, 65 (4), p. 1187-1194. ISSN 0925-9864.
Identifiant IRD : fdi:010072473 -
Barckmann B., El-Barouk M., Pelisson A., Mugat B., Li B., Franckhauser C., Lavier A. S. F., Mirouze Marie, Fablet M., Chambeyron S. (2018). The somatic piRNA pathway controls germline transposition over generations. Nucleic Acids Research, 46 (18), p. 9524-9536. ISSN 0305-1048.
Identifiant IRD : fdi:010074521 -
Beulé T., Ilbert P., Adeoti K., Durand-Gasselin T., Dumet Dominique, Engelmann Florent, Morcillo F. (2018). Recovery of oil palm (Elaeis guineensis Jacq.) somatic embryos cryostored for 20 years. Cryoletters, 39 (1), p. 60-66. ISSN 0143-2044.
Identifiant IRD : fdi:010072711 -
Brousseau Louise, Nidelet S., Streiff R. (2018). New WGS data and annotation of the heterosomal vs. autosomal localization of Ostrinia scapulalis (Lepidoptera, Crambidae) nuclear genomic scaffolds. Data in Brief, 20, p. 644-648. ISSN 2352-3409.
Identifiant IRD : fdi:010074455 -
Burgarella Concetta, Cubry Philippe, Kane N. A., Varshney R. K., Mariac Cédric, Liu X., Shi C. C., Thudi M., Couderc Marie, Xu X., Chitikineni A., Scarcelli Nora, Barnaud Adeline, Rhoné Bénédicte, Dupuy C., Francois O., Berthouly Cécile, Vigouroux Yves. (2018). A western Sahara centre of domestication inferred from pearl millet genomes. Nature Ecology and Evolution, 2 (9), 1377-1380. ISSN 2397-334X.
Identifiant IRD : fdi:010073956 -
Cailleau A., Grimanelli Daniel, Blanchet E., Cheptou P. O., Lenormand T. (2018). Dividing a maternal pie among half-sibs : genetic conflicts and the control of resource allocation to seeds in maize. American Naturalist, 192 (5), p. 577-592. ISSN 0003-0147.
Identifiant IRD : fdi:010074144 -
Chu T. T. H., Hoang T. G., Trinh D. C., Bureau C., Meynard D., Vernet A., Ingouff M., Do N. V., Perin C., Guiderdoni E., Gantet Pascal, Maurel C., Luu D. T. (2018). Sub-cellular markers highlight intracellular dynamics of membrane proteins in response to abiotic treatments in rice. Rice, 11, p. art. 23 [8 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010072758 -
Cissoko M., Hocher Valérie, Gherbi Hassen, Gully Djamel, Carre-Mlouka A., Sane S., Pignoly Sarah, Champion Antony, Ngom M., Pujic P., Fournier P., Gtari M., Swanson E., Pesce C., Tisa L. S., Sy M. O., Svistoonoff Sergio. (2018). Actinorhizal signaling molecules : Frankia root hair deforming factor shares properties with NIN inducing factor. Frontiers in Plant Science, 9, p. art. 1494 [12 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010074164 -
Combes Marie-Christine, Joët Thierry, Lashermes Philippe. (2018). Development of a rapid and efficient DNA-based method to detect and quantify adulterations in coffee (Arabica versus Robusta). Food Control, 88, p. 198-206. ISSN 0956-7135.
Identifiant IRD : fdi:010071469 -
Cosiaux Ariane, Gardiner L. M., Stauffer F. W., Bachman S. P., Sonke B., Baker W. J., Couvreur Thomas. (2018). Low extinction risk for an important plant resource : conservation assessments of continental African palms (Arecaceae/Palmae). Biological Conservation, 221, p. 323-333. ISSN 0006-3207.
Identifiant IRD : fdi:010072855 -
Couvreur Thomas. (2018). Unraveling rain forest biodiversity : an interview with Thomas Couvreur. BMC Biology, 16, p. art. 127 [3 p.]. ISSN 1741-7007.
Identifiant IRD : fdi:010074369 -
Cubry Philippe, Dubreuil Tranchant Christine, Thuillet Anne-Céline, Monat C., Ndjiondjop M. N., Labadie K., Cruaud C., Engelen S., Scarcelli Nora, Rhoné Bénédicte, Burgarella Concetta, Dupuy C., Larmande Pierre, Wincker P., Francois O., Sabot François, Vigouroux Yves. (2018). The rise and fall of African rice cultivation revealed by analysis of 246 new genomes. Current Biology, 28 (14), 2274-2282 + 6 p. ISSN 0960-9822.
Identifiant IRD : fdi:010073684 -
de Castro Nunes R., Orozco-Arias S., Crouzillat D., Mueller L. A., Strickler S. R., Descombes P., Fournier C., Moine D., Kochko Alexandre de, Yuyama P. M., Vanzela A. L. L., Guyot Romain. (2018). Structure and distribution of centromeric retrotransposons at diploid and allotetraploid Coffea centromeric and pericentromeric regions. Frontiers in Plant Science, 9, p. art. 175 [14p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010072372 -
Debieu Marilyne, Sine B., Passot S., Grondin Alexandre, Akata E., Gangashetty P., Vadez Vincent, Gantet Pascal, Fonceka D., Cournac Laurent, Hash C. T., Kane N. A., Vigouroux Yves, Laplaze Laurent. (2018). Response to early drought stress and identification of QTLs controlling biomass production under drought in pearl millet. PLoS One, 13 (10), p. e0201635 [19 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010074368 -
Diagne Nathalie, Baudoin Ezékiel, Svistoonoff Sergio, Ouattara C., Diouf D., Kane A., Ndiaye C., Noba K., Bogusz Didier, Franche Claudine, Duponnois Robin. (2018). Effect of native and allochthonous arbuscular mycorrhizal fungi on Casuarina equisetifolia growth and its root bacterial community. Arid Land Research and Management, 32 (2), p. 212-228. ISSN 1532-4982.
Identifiant IRD : fdi:010072400 -
Diop B. M., Gueye M. C., Agbangba C. E., Cisse N., Deu M., Diack O., Fofana A., Kane N. A., Ndir K. N., Ndoye I., Ngom A., Leclerc C. Y. A., Piquet M., Vigouroux Yves, Zekraoui Leila, Billot C., Barnaud Adeline. (2018). Fonio (Digitaria exilis (Kippist) Stapf) : a socially embedded cereal for food and nutrition security in Senegal. Ethnobiology Letters, 9 (2), p. 150-165. ISSN 2159-8126.
Identifiant IRD : fdi:010075617 -
Djighaly P. I., Diagne N., Ngom M., Ngom D., Hocher Valérie, Fall D., Diouf D., Laplaze Laurent, Svistoonoff Sergio, Champion Antony. (2018). Selection of arbuscular mycorrhizal fungal strains to improve Casuarina equisetifolia L. and Casuarina glauca Sieb. tolerance to salinity. Annals of Forest Science, 75 (3), p. art. 72 [11 p.]. ISSN 1286-4560.
Identifiant IRD : fdi:010073647 -
Droissart Vincent, Dauby G., Hardy O. J., Deblauwe Vincent, Harris D. J., Janssens S., Mackinder B., Blach-Overgaard A., Sonke B., Sosef M. S. M., Stevart T., Svenning J. C., Wieringa J. J., Couvreur Thomas. (2018). Beyond trees : biogeographical regionalization of tropical Africa. Journal of Biogeography, 45 (5), p. 1153-1167. ISSN 0305-0270.
Identifiant IRD : fdi:010072844 -
Dussert Stéphane, Serret Julien, Bastos-Siqueira A., Morcillo F., Dechamp E., Rofidal V., Lashermes Philippe, Etienne H., Joët Thierry. (2018). Integrative analysis of the late maturation programme and desiccation tolerance mechanisms in intermediate coffee seeds. Journal of Experimental Botany, 69 (7), p. 1583-1597. ISSN 0022-0957.
Identifiant IRD : fdi:010072718 -
Esposito S., Aversano R., D'Amelia V., Villano C., Alioto D., Mirouze Marie, Carputo D. (2018). Dicer-like and RNA-dependent RNA polymerase gene family identification and annotation in the cultivated Solanum tuberosum and its wild relative S. commersonii. Planta, 248 (3), p. 729-743. ISSN 0032-0935.
Identifiant IRD : fdi:010073739 -
Fontanier C., Dissard Delphine, Ruffine L., Mamo B., Ponzevera E., Pelleter E., Baudin F., Roubi A., Chéron Sophie, Boissier A., Gayet N., Bermell-Fleury S., Pitel M., Guyader V., Lesongeur F., Savignac F. (2018). Living (stained) deep-sea foraminifera from the Sea of Marmara : a preliminary study. Deep-Sea Research Part II :Topical Studies in Oceanography, 153 (No spécial), p. 61-78. ISSN 0967-0645.
Identifiant IRD : fdi:010074392 -
Gallusci P., Bucher E., Mirouze Marie. (2018). Preface. In :
Mirouze Marie (ed.), Bucher E. (ed.), Gallusci P. (ed.). Plant epigenetics coming of age for breeding applications. Advances in Botanical Research, 88, p. XV-XVIII. ISSN 0065-2296.
Identifiant IRD : fdi:010074865 -
Galzi Agnès, Hébrard Eugénie, Traoré O., Silué D., Albar Laurence. (2018). Protocol for RYMV inoculation and resistance evaluation in rice seedlings. Bio-Protocol, 8 (11), e2863 [13 p.].
Identifiant IRD : fdi:010075169 -
Grondin Alexandre, Dixit S., Torres R., Venkateshwarlu C., Rogers E., Mitchell-Olds T., Benfey P. N., Kumar A., Henry A. (2018). Physiological mechanisms contributing to the QTL qDTY(3.2) effects on improved performance of rice Moroberekan x Swarna BC2F(3:4) lines under drought. Rice, 11, p. art. 43 [25 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010073704 -
Guerrero J., Andrello M., Burgarella Concetta, Manel S. (2018). Soil environment is a key driver of adaptation in Medicago truncatula : new insights from landscape genomics. New Phytologist, 219 (1), p. 378-390. ISSN 0028-646X.
Identifiant IRD : fdi:010073677 -
Hajjarpoor A., Soltani A., Zeinali E., Kashiri H., Aynehband A., Vadez Vincent. (2018). Using boundary line analysis to assess the on-farm crop yield gap of wheat. Field Crops Research, 225, p. 64-73. ISSN 0378-4290.
Identifiant IRD : fdi:010073728 -
Harper L., Campbell J., Cannon E. K. S., Jung S., Poelchau M., Walls R., Andorf C., Arnaud E., Berardini T. Z., Birkett C., Cannon S., Carson J., Condon B., Cooper L., Dunn N., Elsik C. G., Farmer A., Ficklin S. P., Grant D., Grau E., Herndon N., Hu Z. L., Humann J., Jaiswal P., Jonquet C., Laporte M. A., Larmande Pierre, Lazo G., McCarthy F., Menda N., Mungall C. J., Munoz-Torres M. C., Naithani S., Nelson R., Nesdill D., Park C., Reecy J., Reiser L., Sanderson L. A., Sen T. Z., Staton M., Subramaniam S., Tello-Ruiz M. K., Unda V., Unni D., Wang L. Y., Ware D., Wegrzyn J., Williams J., Woodhouse M., Yu J., Main D. (2018). AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database : the Journal of Biological Databases and Curation, p. bay088 [32 p.]. ISSN 1758-0463.
Identifiant IRD : fdi:010074051 -
Hébrard Eugénie, Galzi Agnès, Oludare A., Poulicard Nils, Aribi Jamel, Fabre S., Issaka S., Mariac Cédric, Dereeper Alexis, Albar Laurence, Silue D., Fargette Denis. (2018). Identification of a hypervirulent pathotype of Rice yellow mottle virus : a threat to genetic resistance deployment in West-Central Africa. Phytopathology, 108 (2), p. 299-307. ISSN 0031-949X.
Identifiant IRD : fdi:010072488 -
Hébrard Eugénie, Galzi Agnès, Oludare A., Poulicard Nils, Aribi Jamel, Fabre S., Issaka S., Mariac Cédric, Dereeper Alexis, Albar Laurence, Silue D., Fargette Denis. (2018). Identification of a hypervirulent pathotype of Rice yellow mottle virus : a threat to genetic resistance deployment in West-Central Africa. Phytopathology, 108 (10), p. 303-303. ICPP.International Congress of Plant Pathology, Boston (USA), 2018/07/29-2018/08/03. ISSN 0031-949X.
Identifiant IRD : fdi:010074426 -
Ikeda Y., Nishihama R., Yamaoka S., Arteaga-Vazquez M. A., Aguilar-Cruz A., Grimanelli Daniel, Pogorelcnik R., Martienssen R. A., Yamato K. T., Kohchi T., Hirayama T., Mathieu O. (2018). Loss of CG methylation in Marchantia polymorpha causes disorganization of cell division and reveals unique DNA methylation regulatory mechanisms of non-CG methylation. Plant and Cell Physiology, 59 (12), p. 2421-2431. ISSN 0032-0781.
Identifiant IRD : PAR00018851 -
Jonquet C., Toulet A., Arnaud E., Aubin S., Yeumo E. D., Emonet V., Graybeal J., Laporte M. A., Musen M. A., Pesce V., Larmande Pierre. (2018). AgroPortal : a vocabulary and ontology repository for agronomy. Computers and Electronics in Agriculture, 144, p. 126-143. ISSN 0168-1699.
Identifiant IRD : fdi:010072354 -
Junker R. R., Kuppler J., Amo L., Blande J. D., Borges R. M., van Dam N. M., Dicke M., Dotterl S., Ehlers B. K., Etl F., Gershenzon J., Glinwood R., Gols R., Groot A. T., Heil M., Hoffmeister M., Holopainen J. K., Jarau S., John L., Kessler A., Knudsen J. T., Kost C., Larue-Kontic A. A. C., Leonhardt S. D., Lucas-Barbosa D., Majetic C. J., Menzel F., Parachnowitsch A. L., Pasquet Rémy, Poelman E. H., Raguso R. A., Ruther J., Schiestl F. P., Schmitt T., Tholl D., Unsicker S. B., Verhulst N., Visser M. E., Weldegergis B. T., Kollner T. G. (2018). Covariation and phenotypic integration in chemical communication displays : biosynthetic constraints and eco-evolutionary implications. New Phytologist, 220 (3), p. 739-749. ISSN 0028-646X.
Identifiant IRD : fdi:010074320 -
Kamga S. M., Niangadouma R., Stauffer F. W., Sonke B., Couvreur Thomas. (2018). Two new species of Raphia (Palmae/Arecaceae) from Cameroon and Gabon. Phytokeys, (111), p. 17-30. ISSN 1314-2011.
Identifiant IRD : fdi:010074411 -
Kouam E. B., Avana-Tientcheu M. L., Lekeumo V. D., Akitio H. M., Khasa D. P., Pasquet Rémy. (2018). Agro-ecological distribution of the phenotypic diversity of aerial yam (Dioscorea bulbifera L.) in Cameroon using multivariate analysis : prospect for germplasm conservation and improvement. Open Agriculture, 3 (1), p. 190-206. ISSN 2391-9531.
Identifiant IRD : fdi:010074472 -
Lanciano Sophie, Mirouze Marie. (2018). Transposable elements : all mobile, all different, some stress responsive, some adaptive ?. Current Opinion in Genetics and Development, 49, p. 106-114. ISSN 0959-437X.
Identifiant IRD : fdi:010073096 -
Laplaze Laurent, Sparvoli F., Masmoudi K., Hash C. T. (2018). Harvesting plant and microbial biodiversity for sustainably enhanced food security [Editorial]. Frontiers in Plant Science, 9, p. art. 42 [2 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010072029 -
Lavarenne J., Guyomarc'h S., Sallaud C., Gantet Pascal, Lucas Mikaël. (2018). The spring of systems biology-driven breeding. Trends in Plant Science, 23 (8), p. 706-720. ISSN 1360-1385.
Identifiant IRD : fdi:010073683 -
Lechaudel M., Darnaudery M., Joët Thierry, Fournier P., Joas J. (2018). Genotypic and environmental effects on the level of ascorbic acid, phenolic compounds and related gene expression during pineapple fruit development and ripening. Plant Physiology and Biochemistry, 130, p. 127-138. ISSN 0981-9428.
Identifiant IRD : fdi:010074063 -
Lissambou B., Hardy O. J., Atteke C., Stevart T., Dauby G., Mbatchi B., Sonke B., Couvreur Thomas. (2018). Taxonomic revision of the African genus Greenwayodendron (Annonaceae). Phytokeys, (114), p. 55-93. ISSN 1314-2011.
Identifiant IRD : fdi:010074858 -
Magwe-Tindo J., Wieringa J. J., Sonke B., Zapfack L., Vigouroux Yves, Couvreur Thomas, Scarcelli Nora. (2018). Guinea yam (Dioscorea spp., Dioscoreaceae) wild relatives identified using whole plastome phylogenetic analyses. Taxon, 67 (5), p. 905-915. ISSN 0040-0262.
Identifiant IRD : fdi:010074332 -
Mancini M., Permingeat H., Colono C., Siena L., Pupilli F., Azzaro C., Dusi D. M. D., Carneiro V. T. D., Podio M., Seijo J. G., Gonzalez A. M., Felitti S. A., Ortiz J. P. A., Leblanc Olivier, Pessino S. C. (2018). The MAP3K-coding QUI-GON JINN (QGJ) gene is essential to the formation of unreduced embryo sacs in Paspalum. Frontiers in Plant Science, 9, p. art. 1547 [15 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010074165 -
Mariac Cédric, Vigouroux Yves, Duponchelle Fabrice, Garcia-Davila C., Nunez Rodriguez Jesus, Desmarais E., Renno Jean-François. (2018). Metabarcoding by capture using a single COI probe (MCSP) to identify and quantify fish species in ichthyoplankton swarms. Plos One, 13 (9), p. e0202976 [15 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010074064 -
Mbodj D., Effa-Effa B., Kane A., Manneh B., Gantet Pascal, Laplaze Laurent, Diedhiou A. G., Grondin Alexandre. (2018). Arbuscular mycorrhizal symbiosis in rice : establishment, environmental control and impact on plant growth and resistance to abiotic stresses. Rhizosphere, 8, p. 12-26.
Identifiant IRD : fdi:010077344 -
Monthe F. K., Duminil Jérôme, Yakusu E. K., Beeckman H., Bourland N., Doucet J. L., Sosef M. S. M., Hardy O. J. (2018). The African timber tree Entandrophragma congoense (Pierre ex De Wild.) A.Chev. is morphologically and genetically distinct from Entandrophragma angolense (Welw.) C.DC. Tree Genetics and Genomes, 14 (5), p. art. 66 [13 p.]. ISSN 1614-2942.
Identifiant IRD : fdi:010073777 -
Ndiku S. L., Nakweti R. K., Sinou V., Rouvier F., Fundu T. M., Franche Claudine, Kanianga R. C. (2018). Improvement of secondary metabolites from Phyllanthus odontadenius against malaria by mutagenesis. British Journal of Pharmaceutical Research, 21 (2), p. art. 37978 [14 p.]. ISSN 2231-2919.
Identifiant IRD : fdi:010072669 -
Okoma P., Akaffou S., De Reffye P., Hamon Perla, Hamon Serge, Konan O., Kouassi K. H., Legnate H., Letort V., Sabatier S. (2018). Estimation of stem and leaf dry biomass using a non-destructive method applied to African Coffea species. Agroforestry Systems, 92 (3), p. 667-675. ISSN 0167-4366.
Identifiant IRD : fdi:010073036 -
Oltehua-Lopez O., Dorantes-Acosta A. E., Ingouff M., Lanciano Sophie, Leblanc Olivier, Grimanelli Daniel, Mirouze Marie, Arteaga-Vazquez M. A. (2018). Aspects of epigenetic regulation in cereals. In :
Plant epigenetics coming of age for breeding applications. Advances in Botanical Research, 88, p. 361-386. ISSN 0065-2296.
Identifiant IRD : fdi:010074864 -
Onstein R. E., Baker W. J., Couvreur Thomas, Faurby S., Herrera-Alsina L., Svenning J. C., Kissling W. D. (2018). To adapt or go extinct ? The fate of megafaunal palm fruits under past global change. Proceedings of the Royal Society B : Biological Sciences, 285 (1880), p. art. 20180882 [9 p.]. ISSN 0962-8452.
Identifiant IRD : fdi:010073157 -
Pan C., Liu J., Bi W. L., Chen H. Y., Engelmann Florent, Wang Q. C. (2018). Cryopreservation of small leaf squares-bearing adventitious buds of Lilium oriental hybrid 'Siberia' by vitrification. Plant Cell Tissue and Organ Culture, 133 (1), p. 159-164. ISSN 0167-6857.
Identifiant IRD : fdi:010072490 -
Passot S., Moreno-Ortega B., Moukouanga Daniel, Balsera C., Guyomarc'h S., Lucas Mikaël, Lobet G., Laplaze Laurent, Muller B., Guedon Y. (2018). A new phenotyping pipeline reveals three types of lateral roots and a random branching pattern in two cereals. Plant Physiology, 177 (3), p. 896-910. ISSN 0032-0889.
Identifiant IRD : fdi:010073679 -
Poirier E. Z., Goic B., Tome-Poderti L., Frangeul L., Boussier J., Gausson V., Blanc H., Vallet T., Loyd H., Levi L. I., Lanciano Sophie, Baron C., Merkling S. H., Lambrechts L., Mirouze Marie, Carpenter S., Vignuzzi M., Saleh M. C. (2018). Dicer-2-dependent generation of viral DNA from defective genomes of RNA viruses modulates antiviral immunity in insects. Cell Host and Microbe, 23 (3), p. 353-365 + annexes e1–e7. ISSN 1931-3128.
Identifiant IRD : fdi:010072512 -
Reynolds M., Kropff M., Crossa J., Koo J., Kruseman G., Milan A. M., Rutkoski J., Schulthess U., Balwinder Singh, Sonder K., Tonnang H., Vadez Vincent. (2018). Role of modelling in international crop research : overview and some case studies. Agronomy, 8 (12), p. art. 291 [46p.]. ISSN 2073-4395.
Identifiant IRD : fdi:010074868 -
Rosa Jrbf, Mantello C. C., Garcia D., de Souza L. M., da Silva C. C., Gazaffi R., da Silva C. C., Toledo-Silva G., Cubry Philippe, Garcia A. A. F., de Souza A. P., Le Guen V. (2018). QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions. BMC Plant Biology, 18, p. art. 223 [16 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010074126 -
Selles Benjamin, Michaud Caroline, Xiong T. C., Leblanc Olivier, Ingouff M. (2018). Arabidopsis pollen tube germination and growth depend on the mitochondrial calcium uniporter complex. New Phytologist, 219 (1), p. 58-65. ISSN 0028-646X.
Identifiant IRD : fdi:010073675 -
Simao M. J., Collin Myriam, Garcia R. O., Mansur E., Pacheco G., Engelmann Florent. (2018). Histological characterization of Passiflora pohlii Mast. root tips cryopreserved using the V-Cryo-plate technique. Protoplasma, 255 (3), p. 741-750. ISSN 0033-183X.
Identifiant IRD : fdi:010072736 -
Sow M. D., Le Gac A., Lafon-Placette C., Delaunay A., Le Jan I., Fichot R., Maury S., Mirouze Marie, Lanciano Sophie, Tost J., Segura V., Chaparro C., Grunau C., Allona I., Le Provost G., Plomion C., Salse J., Ambroise C., Gribkova S., Strauss S. H. (2018). Clarifying the role of DNA methylation in tree phenotypic plasticity. FEBS Open Bio, 8 (1), p. 138-138. ISSN 2211-5463.
Identifiant IRD : fdi:010073641 -
Ta K. N., Khong N. G., Ha T. L., Nguyen D. T., Mai D. C., Hoang T. G., Phung T. P. N., Bourrie I., Courtois B., Tran T. T. H., Dinh B. Y., La T. N., Do N. V., Lebrun Michel, Gantet Pascal, Jouannic Stefan. (2018). A genome-wide association study using a Vietnamese landrace panel of rice (Oryza sativa) reveals new QTLs controlling panicle morphological traits. BMC Plant Biology, 18, p. art. 282 [15 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010074454 -
Tharanya M., Sivasakthi K., Barzana G., Kholová J., Thirunalasundari T. , Vadez Vincent. (2018). Pearl millet (Pennisetum glaucum) contrasting for the transpiration response to vapour pressure deficit also differ in their dependence on the symplastic and apoplastic water transport pathways. Functional Plant Biology, 45 (7), 719-736. ISSN 1445-4408.
Identifiant IRD : fdi:010081702 -
Trinh C.D., Laplaze Laurent, Guyomarc'h S. (2018). Lateral root formation : building a meristem de novo. Annual Plant Reviews, 1 (3), 44 p. ISSN 2639-3832.
Identifiant IRD : fdi:010087048 -
Venkatesan A., Ngompe G. T., El Hassouni N., Chentli I., Guignon V., Jonquet C., Ruiz M., Larmande Pierre. (2018). Agronomic Linked Data (AgroLD) : a knowledge-based system to enable integrative biology in agronomy. PLoS One, 13 (11), e0198270 [17 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010074505 -
Veranso-Libalah M. C., Kadereit G., Stone R. D., Couvreur Thomas. (2018). Multiple shifts to open habitats in Melastomateae (Melastomataceae) congruent with the increase of African Neogene climatic aridity. Journal of Biogeography, 45 (6), p. 1420-1431. ISSN 0305-0270.
Identifiant IRD : fdi:010073143
Articles
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Gnacadja C., Berthouly Cécile, Sall S.N., Zekraoui Leila , Sabot François, Pegalepo E., Manneh B., Vieira-Dalode G., Moreira J., Soumanou M.M., Azokpota P., Sie M. (2018). Caractérisation phénotypique et génétique du riz africain (Oryza glaberrima Steud). International Journal of Advanced Research, 6 (2), 1389-1398. ISSN 2320-5407.
Identifiant IRD : fdi:010080161 -
Lavarenne J., Lucas Mikaël, Gantet P.. (2018). De Facebook au développement des plantes : quand les réseaux s'en mêlent. The Conversation France, 7 février, en ligne [6 p.]. ISSN 2431-2134.
Identifiant IRD : fdi:010079178 -
Montufar R., Louise C., Tranbarger Timothy. (2018). Elaeis oleifera (Kunth) Cortés : a neglected palm from the Ecuadorian Amazon. Revista Ecuatoriana de Medicina y Ciencias Biologicas, 28 (1), 11-18. ISSN 2477-9148.
Identifiant IRD : fdi:010074674
Directions d'ouvrages ou de revues
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Mirouze Marie (ed.), Bucher E. (ed.), Gallusci P. (ed.). (2018). Plant epigenetics coming of age for breeding applications. Advances in Botanical Research, 88, 453 p. ISSN 0065-2296.
Identifiant IRD : fdi:010075425
Ouvrages
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Malaurie Bernard. (2018). Palmiers menacés : situation, causes et remèdes.
Paris ; Marseille : Ed. des Archives Contemporaines ; IRD, 286 p. ISBN 978-2-8130-0296-9.
Identifiant IRD : fdi:010077659
Chapitres ou parties d'ouvrages
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Franche Claudine. (2018). Biotechnologies végétales et pays en développement. In :
Regnault-Roger C. (dir.), Houdebine L.M. (dir.), Ricroh A. (dir.). Au-delà des OGM : science - innovation - société. Paris : Presses des Mines, p. 115-134. (Académie d'Agriculture de France). ISBN 978-2-356-71516-6.
Identifiant IRD : fdi:010073849 -
Sime-Ngando T., Bertrand J.C., Bogusz Didier, Brugère J.F., Franche Claudine, Fardeau Marie-Laure, Froussart Emilie, Geiger Anne, Soledad Goñi Urriza Maria, Ollivier Bernard, O'Toole P. (2018). The evolution of living beings started with prokaryotes and in interaction with prokaryotes. In :
Bertrand J.C. (ed.), Normand P. (ed.), Ollivier Bernard (ed.), Sime-Ngando (ed.). Prokaryotes and evolution. Cham : Springer, p. 241-338. ISBN 978-3-319-99782-7.
Identifiant IRD : fdi:010076873
2017
Articles référencés dans le Web of Science
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Akakpo R., Scarcelli Nora, Chair H., Dansi A., Djedatin G., Thuillet Anne-Céline, Rhoné Bénédicte, Francois O., Alix K., Vigouroux Yves. (2017). Molecular basis of African yam domestication : analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes. BMC Genomics, 18, p. art. 782 [9 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010071282 -
Alves G. S. C., Torres L. F., Dechamp E., Breitler J. C., Joët Thierry, Gatineau F., Andrade A. C., Bertrand B., Marraccini P., Etienne H. (2017). Differential fine-tuning of gene expression regulation in coffee leaves by CcDREB1D promoter haplotypes under water deficit. Journal of Experimental Botany, 68 (11), p. 3017-3031. ISSN 0022-0957.
Identifiant IRD : fdi:010070376 -
Barnaud Adeline, Vigouroux Yves, Diallo M. T., Saidou S. I., Piquet M., Barry M. B., Bakasso Y., Zekraoui Leila, Rivallan R., Kane N. A., Billot C. (2017). High selfing rate inferred for white fonio [Digitaria exilis (Kippist.) Stapf] reproductive system opens up opportunities for breeding programs. Genetic Resources and Crop Evolution, 64 (7), p. 1485-1490. ISSN 0925-9864.
Identifiant IRD : fdi:010071021 -
Bowman J. L., Kohchi T., Yamato K. T., Jenkins J., Shu S. Q., Ishizaki K., Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S. S., Althoff F., Araki T., Arteaga-Vazquez M. A., Balasubrmanian S., Barry K., Bauer D., Boehm C. R., Briginshaw L., Caballero-Perez J., Catarino B., Chen F., Chiyoda S., Chovatia M., Davies K. M., Delmans M., Demura T., Dierschke T., Dolan L., Dorantes-Acosta A. E., Eklund D. M., Florent S. N., Flores-Sandoval E., Fujiyama A., Fukuzawa H., Galik B., Grimanelli Daniel, Schmutz J., et al. (2017). Insights into land plant evolution garnered from the Marchantia polymorpha genome. Cell, 171 (2), p. 287-304 +e1-e10 + 4 p. ISSN 0092-8674.
Identifiant IRD : fdi:010071230 -
Cacas J.L, Pré M., Pizot M., Cissoko M., Diedhiou Issa, Jalloul A., Doumas P., Nicole Michel, Champion Antony. (2017). GhERF-IIb3 regulates the accumulation of jasmonate and leads to enhanced cotton resistance to blight disease. Molecular Plant Pathology, 18 (6), p. 825-836. ISSN 1464-6722.
Identifiant IRD : fdi:010070404 -
Campa Claudine, Urban L., Mondolot L., Fabre D., Roques S., Lizzi Y., Aarrouf J., Doulbeau Sylvie, Breitler J. C., Letrez C., Toniutti L., Bertrand B., La Fisca P., Bidel L. P. R., Etienne H. (2017). Juvenile coffee leaves acclimated to low light are unable to cope with a moderate light increase. Frontiers in Plant Science, 8, p. art. 1126 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010070373 -
Campagne P., Capdevielle Dulac Claire, Pasquet Rémy, Cornell S. J., Kruger M., Silvain Jean-François, Le Rü Bruno, Van den Berg J. (2017). Genetic hitchhiking and resistance evolution to transgenic Bt toxins : insights from the African stalk borer Busseola fusca (Noctuidae). Heredity, 118 (4), p. 330-339. ISSN 0018-067X.
Identifiant IRD : fdi:010069380 -
Clement Y., Sarah G., Holtz Y., Homa F., Pointet S., Contreras S., Nabholz B., Sabot François, Saune L., Ardisson M., Bacilieri R., Besnard G., Berger A., Cardi C., De Bellis F., Fouet O., Jourda C., Khadari B., Lanaud C., Leroy T., Pot D., Sauvage C., Scarcelli Nora, Tregear James, Vigouroux Yves, Yahiaoui N., Ruiz M., Santoni S., Labouisse J. P., Pham Jean-Louis, David J., Glemin S. (2017). Evolutionary forces affecting synonymous variations in plant genomes. Plos Genetics, 13 (5), e1006799 [28 p.]. ISSN 1553-7404.
Identifiant IRD : fdi:010070210 -
Cohen-Boulakia S., Belhajjame K., Collin O., Chopard J., Froidevaux C., Gaignard A., Hinsen K., Larmande Pierre, Le Brass Y., Lemoine F., Mareuil F., Menager H., Pradal C., Blanchet C. (2017). Scientific workflows for computational reproducibility in the life sciences : status, challenges and opportunities. Future Generation Computer Systems : the International Journal of Escience, 75, p. 284-298. ISSN 0167-739X.
Identifiant IRD : fdi:010070287 -
Corratge-Faillie C., Ronzier E., Sanchez F., Prado K., Kim J. H., Lanciano Sophie, Leonhardt N., Lacombe B., Xiong T. C. (2017). The Arabidopsis guard cell outward potassium channel GORK is regulated by CPK33. FEBS Letters, 591 (13), p. 1982-1992. ISSN 1873-3468.
Identifiant IRD : fdi:010070330 -
Cubry Philippe, Scotti I., Oddou-Muratorio S., Lefevre F. (2017). Generalization of the Q(ST) framework in hierarchically structured populations : impacts of inbreeding and dominance. Molecular Ecology Resources, 17 (6), p. e76-e83. ISSN 1755-098X.
Identifiant IRD : fdi:010071397 -
Cubry Philippe, Vigouroux Yves, Francois O. (2017). The empirical distribution of singletons for geographic samples of DNA sequences. Frontiers in Genetics, 8, p. art. 139 [10 p.]. ISSN 1664-8021.
Identifiant IRD : fdi:010071038 -
da Silva J. A. T., Engelmann Florent. (2017). Cryopreservation of oil palm (Elaeis guineensis Jacq.). Cryobiology, 77, p. 82-88. ISSN 0011-2240.
Identifiant IRD : fdi:010070831 -
Dauby G., Stevart T., Droissart Vincent, Cosiaux Ariane, Deblauwe Vincent, Simo-Droissart M., Sosef M. S. M., Lowry P. P., Schatz G. E., Gereau R. E., Couvreur Thomas. (2017). ConR : an R package to assist large-scale multispecies preliminary conservation assessments using distribution data. Ecology and Evolution, 7 (24), p. 11292-11303. ISSN 2045-7758.
Identifiant IRD : fdi:010071950 -
Debieu Marilyne, Kanfany G., Laplaze Laurent. (2017). Pearl millet genome : lessons from a tough crop. Trends in Plant Science, 22 (11), p. 911-913. ISSN 1360-1385.
Identifiant IRD : fdi:010071321 -
Debladis E., Llauro C., Carpentier M. C., Mirouze Marie, Panaud O. (2017). Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology. BMC Genomics, 18, p. art. 537 [8 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010070371 -
Diack O., Kane N. A., Berthouly Cécile, Gueye M. C., Diop B. M., Fofana A., Sy O., Tall H., Zekraoui Leila, Piquet M., Couderc Marie, Vigouroux Yves, Diouf D., Barnaud Adeline. (2017). New genetic insights into pearl millet diversity as revealed by characterization of early- and late-flowering landraces from Senegal. Frontiers in Plant Science, 8, p. art. 818 [9 p. ]. ISSN 1664-462X.
Identifiant IRD : fdi:010070053 -
Djedatin G., Monat C., Engelen S., Sabot François. (2017). DuplicationDetector, a light weight tool for duplication detection using NGS data. In :
Naithani S. (ed.), Albrecht A. (ed.). Plant development. Current Plant Biology, 9-10 (No spécial), 23-28. ISSN 2214-6628.
Identifiant IRD : fdi:010080162 -
Donkpegan A. S. L., Doucet J. L., Migliore J., Duminil Jérôme, Dainou K., Pineiro R., Wieringa J. J., Champluvier D., Hardy O. J. (2017). Evolution in African tropical trees displaying ploidy-habitat association : the genus Afzelia (Leguminosae). Molecular Phylogenetics and Evolution, 107, p. 270-281. ISSN 1055-7903.
Identifiant IRD : fdi:010069387 -
Dupeyron M., de Souza R. F., Hamon Perla, Kochko Alexandre de, Crouzillat D., Couturon Emmanuel, Domingues D. S., Guyot Romain. (2017). Distribution of Divo in Coffea genomes, a poorly described family of angiosperm LTR-Retrotransposons. Molecular Genetics and Genomics, 292 (4), p. 741-754. ISSN 1617-4615.
Identifiant IRD : fdi:010070381 -
Eiserhardt W. L., Couvreur Thomas, Baker W. J. (2017). Plant phylogeny as a window on the evolution of hyperdiversity in the tropical rainforest biome. New Phytologist, 214 (4), p. 1408-1422. ISSN 0028-646X.
Identifiant IRD : fdi:010070197 -
Fustier M. A., Brandenburg J. T., Boitard S., Lapeyronnie J., Eguiarte L. E., Vigouroux Yves, Manicacci D., Tenaillon M. I. (2017). Signatures of local adaptation in lowland and highland teosintes from whole-genome sequencing of pooled samples. Molecular Ecology, 26 (10), p. 2738-2756. ISSN 0962-1083.
Identifiant IRD : fdi:010070058 -
Ghogue J. P., Sonke B., Couvreur Thomas. (2017). Taxonomic revision of the African genera Brieya and Piptostigma (Annonaceae). Plant Ecology and Evolution, 150 (2), p. 173-216. ISSN 2032-3913.
Identifiant IRD : fdi:010070321 -
Glato K., Aidam A., Kane N. A., Bassirou D., Couderc Marie, Zekraoui Leila, Scarcelli Nora, Barnaud Adeline, Vigouroux Yves. (2017). Structure of sweet potato (Ipomoea batatas) diversity in West Africa covaries with a climatic gradient. Plos One, 12 (5), e0177697 [17 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010070104 -
Gros-Balthazard M., Galimberti M., Kousathanas A., Newton C., Ivorra S., Paradis L., Vigouroux Yves, Carter R., Tengberg M., Battesti V., Santoni S., Falquet L., Pintaud Jean-Christophe, Terral J. F., Wegmann D. (2017). The discovery of wild date palms in Oman reveals a complex domestication history involving Centers in the Middle East and Africa. Current Biology, 27 (14), p. 2211-2218.e8 [17 p.]. ISSN 0960-9822.
Identifiant IRD : fdi:010070385 -
Guo X., Tang C. C., Thomas D. C., Couvreur Thomas, Saunders R. M. K. (2017). A mega-phylogeny of the Annonaceae : taxonomic placement of five enigmatic genera and support for a new tribe, Phoenicantheae. Scientific Reports - Nature, 7, 7323 [11 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010070890 -
Ingouff M., Selles Benjamin, Michaud Caroline, Vu T. M., Berger F., Schorn A. J., Autran Daphné, Van Durme M., Nowack M. K., Martienssen R. A., Grimanelli Daniel. (2017). Live-cell analysis of DNA methylation during sexual reproduction in Arabidopsis reveals context and sex-specific dynamics controlled by noncanonical RdDM. Genes and Development, 31 (1), p. 72-83. ISSN 0890-9369.
Identifiant IRD : fdi:010069262 -
Jalonen R., Valette M., Boshier D., Duminil Jérôme, Thomas E. (2017). Forest and landscape restoration severely constrained by a lack of attention to the quantity and quality of tree seed : insights from a global survey. Conservation Letters, [Early view], art. no e12424 [9 p. en ligne ]. ISSN 1755-263X.
Identifiant IRD : fdi:010073264 -
Karun A., Sajini K. K., Muralikrishna K. S., Rajesh M. K., Engelmann Florent. (2017). Cryopreservation of arecanut (Areca catechu l.) pollen. Cryoletters, 38 (6), p. 463-470. ISSN 0143-2044.
Identifiant IRD : fdi:010072417 -
Lanciano Sophie, Carpentier M. C., Llauro C., Jobet E., Robakowska-Hyzorek D., Lasserre E., Ghesquière Alain, Panaud O., Mirouze Marie. (2017). Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants. Plos Genetics, 13 (2), p. e1006630 [20p.]. ISSN 1553-7404.
Identifiant IRD : fdi:010069390 -
Lanciano Sophie, Mirouze Marie. (2017). DNA methylation in rice and relevance for breeding. Epigenomes, 1 (2), 10 [13 p.]. ISSN 2075-4655.
Identifiant IRD : fdi:010070824 -
Lashermes Philippe, Combes Marie-Christine. (2017). Diversity and genome evolution in coffee. In :
Lashermes Philippe (ed.). Achieving sustainable cultivation of coffee : breeding and quality traits. Cambridge : Burleigh Dodds Science Publ., p. 3-20. (Burleigh Dodds Series in Agriculture Science ; 39). ISBN 978-1-78676-152-1. ISSN 2059-6936.
Identifiant IRD : fdi:010071467 -
Lashermes Philippe (ed.). (2017). Achieving sustainable cultivation of coffee : breeding and quality traits.
Cambridge : Burleigh Dodds Science Publ., 392 p. (Burleigh Dodds Series in Agriculture Science ; 39). ISBN 978-1-78676-152-1. ISSN 2059-6936.
Identifiant IRD : fdi:010071466 -
Lompo D., Vinceti B., Gaisberger H., Konrad H., Duminil Jérôme, Ouedraogo M., Sina S., Geburek T. (2017). Genetic conservation in Parkia biglobosa (Fabaceae: Mimosoideae) : what do we know ?. Silvae Genetica, 66, art. no e12424 [9 p. en ligne ]. ISSN 0037-5349.
Identifiant IRD : fdi:010073265 -
Luebert F., Couvreur Thomas, Gottschling M., Hilger H. H., Miller J. S., Weigend M. (2017). Historical biogeography of Boraginales : West Gondwanan vicariance followed by long-distance dispersal ?. Journal of Biogeography, 44 (1), p. 158-169. ISSN 0305-0270.
Identifiant IRD : fdi:010068901 -
Maggia M. E., Vigouroux Yves, Renno Jean-François, Duponchelle Fabrice, Desmarais E., Nunez Rodriguez Jesus, Garcia-Davila C., Carvajal-Vallejos F. M., Paradis Emmanuel, Martin J. F., Mariac Cédric. (2017). DNA metabarcoding of Amazonian ichthyoplankton swarms. Plos One, 12 (1), p. e0170009 [14 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010068917 -
Mehrabi Z., Lashermes Philippe. (2017). Protecting the origins of coffee to safeguard its future. Nature Plants, 3 (1), 16209 [3 p.]. ISSN 2055-026X.
Identifiant IRD : fdi:010069355 -
Monat Cécile, Pera B., Ndjiondjop M. N., Sow M., Dubreuil Tranchant Christine, Bastianelli L., Ghesquière Alain, Sabot François. (2017). De novo assemblies of three Oryza glaberrima accessions provide first insights about pan-genome of African rices. Genome Biology and Evolution, 9 (1), 1-6. ISSN 1759-6653.
Identifiant IRD : fdi:010069343 -
Monthe F. K., Hardy O. J., Doucet J. L., Loo J., Duminil Jérôme. (2017). Extensive seed and pollen dispersal and assortative mating in the rain forest tree Entandrophragma cylindricum (Meliaceae) inferred from indirect and direct analyses. Molecular Ecology, 26 (19), p. 5279-5291. ISSN 0962-1083.
Identifiant IRD : fdi:010071285 -
Monthe F.S., Duminil Jérôme, Tosso F., Migliore J., Hardy O.J. (2017). Characterization of microsatellite markers in two exploited African trees, Entandrophragma candollei and E. utile (Meliaceae). Applications in Plant Sciences, 5 (2), art. no 1600130 [7 p.]. ISSN 2168-0450.
Identifiant IRD : fdi:010073266 -
Moreira P. A., Mariac Cédric, Zekraoui Leila, Couderc Marie, Rodrigues D. P., Clement C. R., Vigouroux Yves. (2017). Human management and hybridization shape treegourd fruits in the Brazilian Amazon Basin. Evolutionary Applications, 10 (6), p. 577-589. ISSN 1752-4571.
Identifiant IRD : fdi:010070217 -
Moussouni S., Pintaud Jean-Christophe, Vigouroux Yves, Bouguedoura N. (2017). Diversity of Algerian oases date palm (Phoenix dactylifera L., Arecaceae) : heterozygote excess and cryptic structure suggest farmer management had a major impact on diversity. Plos One, 12 (4), p. e0175232 [14 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010069992 -
Navascues M., Leblois R., Burgarella Concetta. (2017). Demographic inference through approximate-Bayesian-computation skyline plots. PeerJ, 5, p. e3530 [17 p.]. ISSN 2167-8359.
Identifiant IRD : fdi:010070855 -
Ndjiondjop M. N., Semagn K., Gouda A. C., Kpeki S. B., Tia D. D., Sow M., Goungoulou A., Sie M., Perrier X., Ghesquière Alain, Warburton M. L. (2017). Genetic variation and population structure of Oryza glaberrima and development of a mini-core collection using DArTseq. Frontiers in Plant Science, 8, 1748 [19 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010071277 -
Ndour A., Vadez V., Pradal C., Lucas Mikaël. (2017). Virtual plants need water too : functional-structural root system models in the context of drought tolerance breeding. Frontiers in Plant Science, 8, p. art. 1577 [18 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010071049 -
Ndour P. M. S., Gueye M., Barakat M., Ortet P., Bertrand-Huleux M., Pablo Anne-Laure, Dezette D., Chapuis Lardy Lydie, Assigbetsé Komi, Kane N. A., Vigouroux Yves, Achouak W., Ndoye I., Heulin T., Cournac Laurent. (2017). Pearl millet genetic traits shape rhizobacterial diversity and modulate rhizosphere aggregation. Frontiers in Plant Science, 8, art. 1288 [14 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010070825 -
Onstein R. E., Baker W. J., Couvreur Thomas, Faurby S., Svenning J. C., Kissling W. D. (2017). Frugivory-related traits promote speciation of tropical palms. Nature Ecology and Evolution, 1 (12), p. 1903-1911. ISSN 2397-334X.
Identifiant IRD : fdi:010071879 -
Ortiz J. P. A., Revale S., Siena L. A., Podio M., Delgado L., Stein J., Leblanc Olivier, Pessino S. C. (2017). A reference floral transcriptome of sexual and apomictic Paspalum notatum. BMC Genomics, 18, p. art. 318 [14 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010070019 -
Oshone R., Ngom M., Chu F. X., Mansour S., Sy M. O., Champion Antony, Tisa L. S. (2017). Genomic, transcriptomic, and proteomic approaches towards understanding the molecular mechanisms of salt tolerance in Frankia strains isolated from Casuarina trees. BMC Genomics, 18, p. art. 633 [21 p.]. ISSN 1471-2164.
Identifiant IRD : fdi:010070920 -
Othmani A., Collin Myriam, Sellemi A., Jain S. M., Drira N., Aberlenc Bertossi Frédérique. (2017). First reported case of spontaneous hermaphrodism in female date palm (Phoenix dactylifera L.), cv 'Alligue'. Journal of Horticultural Science and Biotechnology, 92 (4), p. 376-388. ISSN 1462-0316.
Identifiant IRD : fdi:010070148 -
Ousseini I. S., Bakasso Y., Kane N. A., Couderc Marie, Zekraoui Leila, Mariac Cédric, Manicacci D., Rhoné Bénédicte, Barnaud Adeline, Berthouly Salazar Cécile, Assoumane A., Moussa D., Moussa Tony, Vigouroux Yves. (2017). Myosin XI is associated with fitness and adaptation to aridity in wild pearl millet. Heredity, 119 (2), p. 88-94. ISSN 0018-067X.
Identifiant IRD : fdi:010070315 -
Petitot Anne-Sophie, Kyndt T., Haidar R., Dereeper Alexis, Collin Myriam, Engler J. D., Gheysen G., Fernandez Diana. (2017). Transcriptomic and histological responses of African rice (Oryza glaberrima) to Meloidogyne graminicola provide new insights into root-knot nematode resistance in monocots. Annals of Botany, 119 (5), p. 885-899. ISSN 0305-7364.
Identifiant IRD : fdi:010070039 -
Pettinelli J. D., Soares B. D., Cantelmo L., Garcia R. D., Mansur E., Engelmann Florent, Gagliardi R. F. (2017). Cryopreservation of somatic embryos from Petiveria alliacea L. by different techniques based on vitrification. In Vitro Cellular and Developmental Biology : Plant, 53 (4), p. 339-345. ISSN 1054-5476.
Identifiant IRD : fdi:010071326 -
Pidon Hélène, Ghesquière Alain, Chéron Sophie, Issaka S., Hébrard Eugénie, Sabot François, Kolade O., Silué D., Albar Laurence. (2017). Fine mapping of RYMV3 : a new resistance gene to Rice yellow mottle virus from Oryza glaberrima. Theoretical and Applied Genetics, 130 (4), 807-818. ISSN 0040-5752.
Identifiant IRD : fdi:010069515 -
Rhoné Bénédicte, Mariac Cédric, Couderc Marie, Berthouly Cécile, Ousseini I. S., Vigouroux Yves. (2017). No excess of cis-regulatory variation associated with intraspecific selection in wild pearl millet (Cenchrus americanus). Genome Biology and Evolution, 9 (2), p. 388-397. ISSN 1759-6653.
Identifiant IRD : fdi:010069377 -
Richards C.L., Alonso C., Becker C., Bossdorf O., Bucher E., Colome-Tatche M., Durka W., Engelhardt J., Gaspar B., Gogol-Doring A., Grosse I., van Gurp T.P., Heer K., Kronholm I., Lampei C., Latzel V., Mirouze Marie, Opgenoorth L., Paun O., Prohaska S., Rensing S.A., Stadler P., Trucchi E., Ullrich K., Verhoeven K.J.F. (2017). Ecological plant epigenetics : evidence from model and non-model species, and the way forward. Ecology Letters, 20 (12), p. 1576-1590. ISSN 1461-0248.
Identifiant IRD : fdi:010071188 -
Sarah G., Homa F., Pointet S., Contreras S., Sabot François, Nabholz B., Santoni S., Saune L., Ardisson M., Chantret N., Sauvage C., Tregear James, Jourda C., Pot D., Vigouroux Yves, Chair H., Scarcelli Nora, Billot C., Yahiaoui N., Bacilieri R., Khadari B., Boccara M., Barnaud Adeline, Peros J. P., Labouisse J. P., Pham Jean-Louis, David J., Glemin S., Ruiz M. (2017). A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives. Molecular Ecology Resources, 17 (3), 565-580. ISSN 1755-098X.
Identifiant IRD : fdi:010070059 -
Scarcelli Nora, Chair H., Causse S., Vesta R., Couvreur Thomas, Vigouroux Yves. (2017). Crop wild relative conservation : wild yams are not that wild. Biological Conservation, 210 (A), p. 325-333. ISSN 0006-3207.
Identifiant IRD : fdi:010070356 -
Selva J. P., Siena L., Rodrigo J. M., Garbus I., Zappacosta D., Romero J. R., Ortiz J. P. A., Pessino S. C., Leblanc Olivier, Echenique V. (2017). Temporal and spatial expression of genes involved in DNA methylation during reproductive development of sexual and apomictic Eragrostis curvula. Scientific Reports - Nature, 7, p. art. 15092 [11 p.]. ISSN 2045-2322.
Identifiant IRD : fdi:010071347 -
Sosef M. S. M., Dauby G., Blach-Overgaard A., van der Burgt X., Catarino L., Damen T., Deblauwe V., Dessein S., Dransfield J., Droissart Vincent, Duarte M. C., Engledow H., Fadeur G., Figueira R., Gereau R. E., Hardy O. J., Harris D. J., de Heij J., Janssens S., Klomberg Y., Ley A. C., Mackinder B. A., Meerts P., de Poel J. L. V., Sonke B., Stevart T., Stoffelen P., Svenning J. C., Sepulchre P., Zaiss Rainer, Wieringa J. J., Couvreur Thomas. (2017). Exploring the floristic diversity of tropical Africa. BMC Biology, 15, p. art. 15 [17 p.]. ISSN 1741-7007.
Identifiant IRD : fdi:010069320 -
Sriwichai W., Collin Myriam, Tranbarger Timothy, Berger Jacques, Avallone S. (2017). Improvement of the content in bioaccessible lipophilic micronutrients in raw and processed drumstick leaves (Moringa oleifera Lam.). LWT - Food Science and Technology, 75, p. 279-285. ISSN 0023-6438.
Identifiant IRD : fdi:010068357 -
Stull G. W., Johnson D. M., Murray N. A., Couvreur Thomas, Reeger J. E., Roy C. M. (2017). Plastid and seed morphology data support a revised infrageneric classification and an african origin of the pantropical genus Xylopia (Annonaceae). Systematic Botany, 42 (2), p. 211-225. ISSN 0363-6445.
Identifiant IRD : fdi:010070184 -
Ta K. N., Adam Hélène, Staedler Y. M., Schonenberger J., Harrop T., Tregear James, Do N. V., Gantet Pascal, Ghesquière Alain, Jouannic Stefan. (2017). Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated African rice. Evodevo, 8, p. art. 2 [14 p.]. ISSN 2041-9139.
Identifiant IRD : fdi:010069324 -
Taedoumg H., Sonke B., Hamon Perla, De Block P. (2017). Craterispermum capitatum and C. gabonicum (Rubiaceae): two new species from the Lower Guinean and Congolian Domains. Phytokeys, (83), p. 103-118. ISSN 1314-2011.
Identifiant IRD : fdi:010070883 -
Thieme M., Lanciano Sophie, Balzergue S., Daccord N., Mirouze Marie, Bucher E. (2017). Inhibition of RNA polymerase II allows controlled mobilisation of retrotransposons for plant breeding. Genome Biology, 18, 134 [10 p.]. ISSN 1474-760X.
Identifiant IRD : fdi:010070332 -
Toniutti L., Breitler J. C., Etienne H., Campa Claudine, Doulbeau Sylvie, Urban L., Lambot C., Pinilla J. C. H., Bertrand B. (2017). Influence of environmental conditions and genetic background of Arabica coffee (C. arabica L) on leaf rust (Hemileia vastatrix) pathogenesis. Frontiers in Plant Science, 8, 2025 [12 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010071384 -
Tournebize R., Manel S., Vigouroux Yves, Munoz F., Kochko Alexandre de, Poncet Valérie. (2017). Two disjunct Pleistocene populations and anisotropic postglacial expansion shaped the current genetic structure of the relict plant Amborella trichopoda. PLOS One, 12 (8), p. e0183412 [18 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010070945 -
Tranbarger Timothy, Fooyontphanich K., Roongsattham P., Pizot M., Collin Myriam, Jantasuriyarat C., Suraninpong P., Tragoonrung S., Dussert Stéphane, Verdeil J. L., Morcillo F. (2017). Transcriptome analysis of cell wall and NAC domain transcription factor genes during Elaeis guineensis fruit ripening : evidence for widespread conservation within monocot and eudicot lineages. Frontiers in Plant Science, 8, p. art. 603 [12 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010069977 -
Tranbarger Timothy, Tucker M. L., Roberts J. A., Meir S. (2017). Plant organ abscission : from models to crops [Editorial]. Frontiers in Plant Science, 8, art. 196 [4 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010069270 -
Tschopp M. A., Pumplin N., Iki T., Brosnan C., Jullien Pauline. (2017). A complex of Arabidopsis DRB proteins can impair dsRNA processing. Protein Science, 26 (1), p. 146-146. ISSN 0961-8368.
Identifiant IRD : fdi:010071946 -
Varshney R. K., Shi Chengcheng, Thudi M., Mariac Cédric, Wallace J., Qi P., Zhang H., Zhao Y. S., Wang X. Y., Rathore A., Srivastava R. K., Chitikineni A., Fan G. Y., Bajaj P., Punnuri S., Gupta S. K., Wang H., Jiang Y., Couderc Marie, Katta Mavsk, Paudel D. R., Mungra K. D., Chen W. B., Harris-Shultz K. R., Garg V., Desai N., Doddamani D., Kane N. A., Conner J. A., Ghatak A., Chaturvedi P., Subramaniam S., Yadav O. P., Berthouly Cécile, Hamidou F., Wang J. P., Liang X. M., Clotault Jeremy, Upadhyaya H. D., Cubry Philippe, Rhoné Bénédicte, Gueye M. C., Sunkar R., Dupuy C., Sparvoli F., Cheng S. F., Mahala R. S., Singh B., Yadav R. S., Lyons E., Datta S. K., Hash C. T., Devos K. M., Buckler E., Bennetzen J. L., Paterson A. H., Ozias-Akins P., Grando S., Wang J., Mohapatra T., Weckwerth W., Reif J. C., Liu X., Vigouroux Yves, Xu X. (2017). Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology, 35 (10), 969-976 + 7 p. ISSN 1087-0156.
Identifiant IRD : fdi:010071241 -
Veranso-Libalah M. C., Stone R. D., Fongod A. G. N., Couvreur Thomas, Kadereit G. (2017). Phylogeny and systematics of African Melastomateae (Melastomataceae). Taxon, 66 (3), p. 584-614. ISSN 0040-0262.
Identifiant IRD : fdi:010070364 -
Vigouroux Yves, Darmency H. (2017). Assessing fitness parameters of hybrids between weed beets and transgenic sugar beets. Plant Breeding, 136 (6), p. 969-976. ISSN 0179-9541.
Identifiant IRD : fdi:010071916 -
Zango O., Cherif Emira, Chabrillange Nathalie, Zehdi-Azouzi S., Gros-Balthazard M., Naqvi S. A., Lemansour A., Rey H., Bakasso Y., Aberlenc Bertossi Frédérique. (2017). Genetic diversity of Southeastern Nigerien date palms reveals a secondary structure within Western populations. Tree Genetics and Genomes, 13 (4), p. art. 75 [11 p.]. ISSN 1614-2942.
Identifiant IRD : fdi:010070940
Articles
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Hamon Perla, Grover C.E., Davis A.P., Rakotomalala J.J., Raharimalala N.E., Albert V.A., Sreenath H.L., Mitchell S.E., Couturon Emmanuel, Hamon Serge, Kochko Alexandre de, Crouzillat D., Rigoreau M., Sumirat U., Akaffou S., Guyot Romain. (2017). Genotyping-by-sequencing provides the first well-resolved phylogeny for coffee (Coffea) and insights into the evolution of caffeine content in its species : GBS coffee phylogeny and the evolution of caffeine content. Molecular Phylogenetics and Evolution, 109, p. 351-361. ISSN 1055-7903.
Identifiant IRD : fdi:010069165
Directions d'ouvrages ou de revues
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Tranbarger Timothy (ed.), Tucker M.L. (ed.), Roberts J.A. (ed.), Meir S. (ed.). (2017). Plant organ abscission : from models to crops.
Lausanne : Frontiers Research Topics, en ligne [273 p.]. (Frontiers in Plant Sciences). ISBN 978-2-88945-328-3. ISSN 1664-8714.
Identifiant IRD : fdi:010074666
Chapitres ou parties d'ouvrages
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Franche Claudine, Duponnois Robin. (2017). Gestion des micro-organismes symbiotiques pour une restauration durable de la productivité des agrosystèmes tropicaux et méditerranéens. In :
Roose Eric (ed.). Restauration de la productivité des sols tropicaux et méditerranéens. Marseille : IRD, 297-302. (Synthèses). ISBN 978-2-7099-2277-7.
Identifiant IRD : fdi:010090860 -
Joët Thierry, Dussert Stéphane. (2017). Environmental and genetic effects on coffee seed biochemical composition and quality. In :
Lashermes Philippe (ed.). Achieving sustainable cultivation of coffee : breeding and quality traits. Cambridge : Burleigh Dodds Science Publ., p. 49-67. (Burleigh Dodds Series in Agriculture Science ; 39). ISBN 978-1-78676-152-1. ISSN 2059-6936.
Identifiant IRD : fdi:010071468 -
Kochko Alexandre de, Hamon Serge, Guyot Romain, Couturon Emmanuel, Poncet Valérie, Dubreuil Tranchant Christine, Crouzillat D., Rigoreau M., Hamon Perla. (2017). Omics applications : Coffee. In :
Chowdappa P. (ed.), Karun A. (ed.), Rajesh M.K. (ed.), Ramesh S.V. (ed.). Biotechnology of plantation crops. New Delhi : Daya Publishing House, p. 589-606. ISBN 9789386071729.
Identifiant IRD : fdi:010069162
2016
Articles référencés dans le Web of Science
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Adriani D. E., Dingkuhn M., Dardou A., Adam Hélène, Luquet D., Lafarge T. (2016). Rice panicle plasticity in Near Isogenic Lines carrying a QTL for larger panicle is genotype and environment dependent. Rice, 9, p. art. 28 [15 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010067614 -
Berthouly Cécile, Mariac Cédric, Couderc Marie, Pouzadoux J., Floc'h J. B., Vigouroux Yves. (2016). Genotyping-by-Sequencing SNP identification for crops without a reference genome : using transcriptome based mapping as an alternative strategy. Frontiers in Plant Science, 7, 777 [11 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010067000 -
Berthouly Cécile, Thuillet Anne-Céline, Rhone Bénédicte, Mariac Cédric, Ousseini I. S., Couderc Marie, Tenaillon M. I., Vigouroux Yves. (2016). Genome scan reveals selection acting on genes linked to stress response in wild pearl millet. Molecular Ecology, 25 (21), p. 5500-5512. ISSN 0962-1083.
Identifiant IRD : fdi:010068313 -
Burgarella Concetta, Chantret N., Gay L., Prosperi J.M., Tiffin P., Young N.D., Ronfort J. (2016). Adaptation to climate through flowering phenology : a case study in Medicago truncatula. Molecular Ecology, 25 (14), 3397-3415. ISSN 0962-1083.
Identifiant IRD : fdi:010081998 -
Castano Felipe, Marquinez X., Crèvecoeur M., Collin Myriam, Stauffer F. W., Tregear James. (2016). Comparison of floral structure and ontogeny in monoecious and dioecious species of the palm tribe Chamaedoreeae (Arecaceae ; Arecoideae). International Journal of Plant Sciences, 177 (3), p. 247-262. ISSN 1058-5893.
Identifiant IRD : fdi:010066691 -
Chabaud M., Gherbi Hassen, Pirolles Elodie, Vaissayre Virginie, Fournier J., Moukouanga Daniel, Franche Claudine, Bogusz Didier, Tisa L. S., Barker D. G., Svistoonoff Sergio. (2016). Chitinase-resistant hydrophilic symbiotic factors secreted by Frankia activate both Ca2+ spiking and NIN gene expression in the actinorhizal plant Casuarina glauca. New Phytologist, 209 (1), p. 86-93. ISSN 0028-646X.
Identifiant IRD : fdi:010066039 -
Cherif E., Zehdi-Azouzi S., Crabos Amandine, Castillo K., Chabrillange Nathalie, Pintaud Jean-Christophe, Salhi-Hannachi A., Glemin S., Aberlenc Bertossi Frédérique. (2016). Evolution of sex chromosomes prior to speciation in the dioecious Phoenix species. Journal of Evolutionary Biology, 29 (8), p. 1513-1522. ISSN 1010-061X.
Identifiant IRD : fdi:010068103 -
Couvreur Thomas, Niangadouma R. (2016). New species of Uvariopsis (Annonaceae) and Laccosperma (Arecaceae/Palmae) from Monts de Cristal, Gabon. Phytokeys, 68, 1-8. ISSN 1314-2011.
Identifiant IRD : fdi:010067786 -
Cunnac Sébastien, Gantet P., Ghesquière Alain, Guiderdoni E., Doan Trung Luu. (2016). Le riz, une plante modèle à croquer !. In :
Les top-modèles végétaux : ce que les plantes nous apprennent du vivant. Biofutur, (380), p. 30-34. ISSN 0294-3506.
Identifiant IRD : fdi:010067382 -
Dauby G., Zaiss Rainer, Blach-Overgaard A., Catarino L., Damen T., Deblauwe Vincent, Dessein S., Dransfield J., Droissart Vincent, Duarte M. C., Engledow H., Fadeur G., Figueira R., Gereau R. E., Hardy O. J., Harris D. J., de Heij J., Janssens S., Klomberg Y., Ley A. C., Mackinder B. A., Meerts P., van de Poel J. L., Sonke B., Sosef M. S. M., Stevart T., Stoffelen P., Svenning J. C., Sepulchre P., van der Burgt X., Wieringa J. J., Couvreur Thomas. (2016). RAINBIO : a mega-database of tropical African vascular plants distributions. Phytokeys, 74, p. 1-18. ISSN 1314-2011.
Identifiant IRD : fdi:010068706 -
Deblauwe Vincent, Droissart Vincent, Bose R., Sonke B., Blach-Overgaard A., Svenning J. C., Wieringa J. J., Ramesh B. R., Stevart T., Couvreur Thomas. (2016). Remotely sensed temperature and precipitation data improve species distribution modelling in the tropics. Global Ecology and Biogeography, 25 (4), p. 443-454. ISSN 1466-822X.
Identifiant IRD : fdi:010066731 -
Diedhiou A. G., Mbaye F. K., Mbodj D., Faye M. N., Pignoly Sarah, Ndoye I., Djaman K., Gaye S., Kane A., Laplaze Laurent, Manneh B., Champion Antony. (2016). Field trials reveal ecotype-specific responses to mycorrhizal inoculation in rice. Plos One, 11 (12), p. e0167014 [17 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010068773 -
Djedatin Gustave, Ndjiondjop M. N., Sanni A., Lorieux Mathias, Verdier Valérie, Ghesquière Alain. (2016). Identification of novel major and minor QTLs associated with Xanthomonas oryzae pv. oryzae (African strains) resistance in rice (Oryza sativa L.). Rice, 9, 1-10. ISSN 1939-8425.
Identifiant IRD : fdi:010066900 -
Dubuisson J. Y., Hennequin S., Droissart Vincent, Deblauwe Vincent. (2016). Hymenophyllum senterreanum Dubuisson & Deblauwe, sp. nov. (Hymenophyllaceae) and its relatives in western Central Africa. Phytotaxa, 257 (3), p. 287-294. ISSN 1179-3155.
Identifiant IRD : fdi:010067749 -
Duminil Jérôme, Mendene Abessolo D.T., Niade Bourobou D., Doucet J.L., Loo J., Hardy O.J. (2016). High selfing rate, limited pollen dispersal and inbreeding depression in the emblematic African rain forest tree Baillonella toxisperma : management implications. Forest Ecology and Management, 379, p. 20-29. ISSN 0378-1127.
Identifiant IRD : fdi:010073286 -
Faye A., Deblauwe Vincent, Mariac Cédric, Richard D., Sonké B., Vigouroux Yves, Couvreur Thomas. (2016). Phylogeography of the genus Podococcus (Palmae/Arecaceae) in Central African rain forests : climate stability predicts unique genetic diversity. Molecular Phylogenetics and Evolution, 105, p. 126-138. ISSN 1055-7903.
Identifiant IRD : fdi:010068232 -
Faye A., Pintaud Jean-Christophe, Baker W. J., Vigouroux Yves, Sonke B., Couvreur Thomas. (2016). Phylogenetics and diversification history of African rattans (Calamoideae, Ancistrophyllinae). In :
Balslev H. (ed.), Bernal R. (ed.), Fay M.F. (ed.). Palms : emblems of tropical forests. Botanical Journal of the Linnean Society, 182 (2 (no spécial)), p. 256-271. ISSN 0024-4074.
Identifiant IRD : fdi:010068246 -
Fooyontphanich K., Morcillo F., Amblard P., Collin Myriam, Jantasuriyarat C., Verdeil J. L., Tangphatsornruang S., Tranbarger Timothy. (2016). A phenotypic test for delay of abscission and non-abscission oil palm fruit and validation by abscission marker gene expression analysis. In :
Wunsche J. N. (ed.), Tranbarger Timothy (ed.). Proceedings of international symposia on abscission processes in horticulture and non-destructive assessment of fruit attributes. Louvain : ISHS, 97-104. (Acta Horticulturae ; 1119). International Horticultural Congress on Horticulture : Sustaining Lives, Livelihoods and Landscapes : International Symposia on Abscission Processes in Horticulture and Non-Destructive Assessment of Fruit Attributes, 29., Brisbane (AUS), 2014/08/17-22. ISBN 9789462611177. ISSN 0567-7572.
Identifiant IRD : fdi:010072213 -
Franche Claudine, Normand P., Pawlowski K., Tisa L. S., Bogusz Didier. (2016). An update on research on Frankia and actinorhizal plants on the occasion of the 18th meeting of the Frankia-actinorhizal plants symbiosis. Symbiosis, 70 (1), p. 1-4. ACTINO : International Meeting on Frankia and Actinorhizal Plant, 18., Montpellier (FRA), 2015/08/24-27. ISSN 0334-5114.
Identifiant IRD : fdi:010067734 -
Freitas C., Meerow A. W., Pintaud Jean-Christophe, Henderson A., Noblick L., Costa F. R. C., Barbosa C. E., Barrington D. (2016). Phylogenetic analysis of Attalea (Arecaceae) : insights into the historical biogeography of a recently diversified Neotropical plant group. In :
Balslev H. (ed.), Bernal R. (ed.), Fay M.F. (ed.). Palms : emblems of tropical forests. Botanical Journal of the Linnean Society, 182 (2 (no spécial)), p. 287-302. ISSN 0024-4074.
Identifiant IRD : fdi:010068247 -
Froussart Emilie, Bonneau Jocelyne, Franche Claudine, Bogusz Didier. (2016). Recent advances in actinorhizal symbiosis signaling. Plant Molecular Biology, 90 (6), p. 613-622. ISSN 0167-4412.
Identifiant IRD : fdi:010066798 -
Froussart Emilie, Zhong C. L., Jiang Q. B., Bonneau Jocelyne, Bogusz Didier, Franche Claudine. (2016). Biotechnological strategies for studying actinorhizal symbiosis in Casuarinaceae : transgenesis and beyond. Symbiosis, 70 (1), p. 101-109. ACTINO : International Meeting on Frankia and Actinorhizal Plant, 18., Montpellier (FRA), 2015/08/24-27. ISSN 0334-5114.
Identifiant IRD : fdi:010067783 -
Galzi Agnès, Dubreuil Tranchant Christine, Hébrard Eugénie, Mariac Cédric, Ghesquière Alain, Albar Laurence. (2016). Mutations in Rice yellow mottle virus polyprotein P2a involved in RYMV2 gene resistance breakdown. Frontiers in Plant Science, 7, 1779 [11 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010068716 -
Goh T., Toyokura K., Wells D. M., Swarup K., Yamamoto M., Mimura T., Weijers D., Fukaki H., Laplaze Laurent, Bennett M. J., Guyomarc'h S. (2016). Quiescent center initiation in the Arabidopsis lateral root primordia is dependent on the SCARECROW transcription factor. Development, 143 (18), p. 3363-3371. ISSN 0950-1991.
Identifiant IRD : fdi:010069248 -
Gomez Céline, Despinoy Marc, Hamon Serge, Hamon Perla, Salmon D., Akaffou D. S., Legnate H., Kochko Alexandre de, Mangeas Morgan, Poncet Valérie. (2016). Shift in precipitation regime promotes interspecific hybridization of introduced Coffea species. Ecology and Evolution, 6 (10), p. 3240-3255. ISSN 2045-7758.
Identifiant IRD : fdi:010066929 -
Goulamoussene Y., Bedeau C., Descroix L., Deblauwe Vincent, Linguet L., Hérault B. (2016). Weak environmental controls of tropical forest canopy height in the Guiana Shield. Remote Sensing, 8 (9), p. art. 747 [16 p.]. ISSN 2072-4292.
Identifiant IRD : fdi:010068673 -
Gros-Balthazard M., Newton C., Ivorra S., Pierre M. H., Pintaud Jean-Christophe, Terral J. F. (2016). The domestication syndrome in Phoenix dactylifera seeds : toward the identification of wild date palm populations. Plos One, 11 (3), e0152394 [21 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010066742 -
Guérin C., Joët Thierry, Serret Julien, Lashermes Philippe, Vaissayre Virginie, Agbessi M.D.T., Beulé T., Severac D., Amblard P., Tregear James, Durand-Gasselin T., Morcillo F., Dussert Stéphane. (2016). Gene coexpression network analysis of oil biosynthesis in an interspecific backcross of oil palm. Plant Journal, 85 (7), p. 423-441. ISSN 0960-7412.
Identifiant IRD : fdi:010067403 -
Guignon V., Hueber Y., Rouard M., Bocs S., Couvin D., De Lamotte F., Droc G., Dufayard J.F., El Hassouni N., Farcy C., Gkanogiannis A., Hamelin C., Larivière D., Martin G., Ortega E., Pitollat B., Pointet S., Ruiz M., Sarah G., Summo M., This D., Ravel S., Larmande Pierre, Monat C., Sabot François, Tando Ndomassi, Dubreuil Tranchant Christine, Sempere G., Dereeper Alexis. (2016). The South Green portal : a comprehensive resource for tropical and Mediterranean crop genomics. In :
Naithani S. (ed.), Van de Peer Y. (ed.). Genomic resources and databases. Current Plant Biology, 7-8, 6-9. ISSN 2214-6628.
Identifiant IRD : fdi:010080164 -
Guyot Romain, Darre T., Dupeyron M., Kochko Alexandre de, Hamon Serge, Couturon Emmanuel, Crouzillat D., Rigoreau M., Rakotomalala J. J., Raharimalala N. E., Akaffou S. D., Hamon Perla. (2016). Partial sequencing reveals the transposable element composition of Coffea genomes and provides evidence for distinct evolutionary stories. Molecular Genetics and Genomics, 291 (5), p. 1979-1990. ISSN 1617-4615.
Identifiant IRD : fdi:010068137 -
Hanin M., Ebel C., Ngom M., Laplaze Laurent, Masmoudi K. (2016). New insights on plant salt tolerance mechanisms and their potential use for breeding. Frontiers in Plant Science, 7, 1787 [17 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010068741 -
Harrop T. W. R., Din I. U., Gregis V., Osnato M., Jouannic Stefan, Adam Hélène, Kater M. M. (2016). Gene expression profiling of reproductive meristem types in early rice inflorescences by laser microdissection. Plant Journal, 86 (1), p. 75-88. ISSN 0960-7412.
Identifiant IRD : fdi:010066855 -
Joët Thierry, Ourcival J. M., Capelli M., Dussert Stéphane, Morin X. (2016). Explanatory ecological factors for the persistence of desiccation-sensitive seeds in transient soil seed banks : Quercus ilex as a case study. Annals of Botany, 117 (1), p. 165-176. ISSN 0305-7364.
Identifiant IRD : fdi:010066214 -
Lashermes Philippe, Hueber Yann, Combes Marie-Christine, Severac D., Dereeper Alexis. (2016). Inter-genomic DNA exchanges and homeologous gene silencing shaped the nascent allopolyploid coffee genome (Coffea arabica L.). G3 : Genes Genomes Genetics, 6 (9), p. 2937-2948. ISSN 2160-1836.
Identifiant IRD : fdi:010068256 -
Lavenus J., Guyomarc'h S., Laplaze Laurent. (2016). PIN transcriptional regulation shapes root system architecture. Trends in Plant Science, 21 (3), p. 175-177. ISSN 1360-1385.
Identifiant IRD : fdi:010066670 -
Mansour S. R., Abdel-lateif K., Bogusz Didier, Franche Claudine. (2016). Influence of salt stress on inoculated Casuarina glauca seedlings. Symbiosis, 70 (1), p. 129-138. ACTINO : International Meeting on Frankia and Actinorhizal Plant, 18., Montpellier (FRA), 2015/08/24-27. ISSN 0334-5114.
Identifiant IRD : fdi:010067784 -
Mariac Cédric, Ousseini I. S., Alio A. K., Jugde H., Pham Jean-Louis, Bezançon Gilles, Ronfort J., Descroix Luc, Vigouroux Yves. (2016). Spatial and temporal variation in selection of genes associated with pearl millet varietal quantitative traits in situ. Frontiers in Genetics, 7, p. art. 130 [9 p.]. ISSN 1664-8021.
Identifiant IRD : fdi:010070191 -
Maugarny-Cales A., Goncalves B., Jouannic Stefan, Melkonian M., Wong G. K. S., Laufs P. (2016). Apparition of the NAC transcription factors predates the emergence of land plants. Molecular Plant, 9 (9), p. 1345-1348. ISSN 1674-2052.
Identifiant IRD : fdi:010068315 -
Moraes R. M., Pintaud Jean-Christophe. (2016). Attalea blepharopus Mart. (Arecaceae) from Bolivia revisited since Martius. Candollea, 71 (1), p. 27-32. ISSN 0373-2967.
Identifiant IRD : fdi:010067600 -
Moreira P. A., Mariac Cédric, Scarcelli Nora, Couderc Marie, Rodrigues D. P., Clément C. R., Vigouroux Yves. (2016). Chloroplast sequence of treegourd (Crescentia cujete, Bignoniaceae) to study phylogeography and domestication. Applications in Plant Sciences, 4 (10), 1600048 [4 p.]. ISSN 2168-0450.
Identifiant IRD : fdi:010068304 -
Muraro D., Larrieu A., Lucas Mikaël, Chopard J., Byrne H., Godin C., King J. (2016). A multi-scale model of the interplay between cell signalling and hormone transport in specifying the root meristem of Arabidopsis thaliana. Journal of Theoretical Biology, 404, p. 182-205. ISSN 0022-5193.
Identifiant IRD : fdi:010067717 -
Nadot S., Alapetite E., Baker W. J., Tregear James, Barfod A. S. (2016). The palm family (Arecaceae) : a microcosm of sexual system evolution. Botanical Journal of the Linnean Society, 182 (2), p. 376-388. ISSN 0024-4074.
Identifiant IRD : fdi:010068248 -
Ngom M., Diagne N., Laplaze Laurent, Champion Antony, Sy M. O. (2016). Symbiotic ability of diverse Frankia strains on Casuarina glauca plants in hydroponic conditions. Symbiosis, 70 (1), p. 79-86. ACTINO : International Meeting on Frankia and Actinorhizal Plant, 18., Montpellier (FRA), 2015/08/24-27. ISSN 0334-5114.
Identifiant IRD : fdi:010067739 -
Ngom M., Gray Krystelle, Diagne N., Oshone R., Fardoux Joël, Gherbi Hassen, Hocher Valérie, Svistoonoff Sergio, Laplaze Laurent, Tisa L. S., Sy M. O., Champion Antony. (2016). Symbiotic performance of diverse Frankia strains on salt-stressed Casuarina glauca and Casuarina equisetifolia plants. Frontiers in Plant Science, 7, 1331 [16 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010067780 -
Ngom M., Oshone R., Diagne N., Cissoko M., Svistoonoff Sergio, Tisa L. S., Laplaze Laurent, Sy M. O., Champion Antony. (2016). Tolerance to environmental stress by the nitrogen-fixing actinobacterium Frankia and its role in actinorhizal plants adaptation. Symbiosis, 70 (1), p. 17-29. ACTINO : International Meeting on Frankia and Actinorhizal Plant, 18., Montpellier (2015/08/24-27) ISSN 0334-5114.
Identifiant IRD : fdi:010067740 -
Ogawa S., Valencia M. O., Lorieux Mathias, Arbelaez J. D., McCouch S., Ishitani M., Selvaraj M. G. (2016). Identification of QTLs associated with agronomic performance under nitrogen-deficient conditions using chromosome segment substitution lines of a wild rice relative, Oryza rufipogon. Acta Physiologiae Plantarum, 38 (4), p. art. 103 [10 p.]. ISSN 0137-5881.
Identifiant IRD : PAR00014446 -
Passot S., Gnacko F., Moukouanga Daniel, Lucas Mikaël, Guyomarc'h S., Ortega B. M., Atkinson J. A., Belko M. N., Bennett M. J., Gantet Pascal, Wells D. M., Guedon Y., Vigouroux Yves, Verdeil J. L., Muller B., Laplaze Laurent. (2016). Characterization of pearl millet root architecture and anatomy reveals three types of lateral roots. Frontiers in Plant Science, 7, p. art. 829 [11p. ]. ISSN 1664-462X.
Identifiant IRD : fdi:010066972 -
Pham M. H., Tran X. H., Berthouly Cécile, Tixier-Boichard M., Chen C. F., Lee Y. P. (2016). Monitoring of genetic diversity in Taiwan conserved chickens assessed by pedigree and molecular data. Livestock Science, 184, p. 85-91. ISSN 1871-1413.
Identifiant IRD : fdi:010066205 -
Plasencia A., Soler M., Dupas A., Ladouce N., Silva-Martins G., Martinez Y., Lapierre C., Franche Claudine, Truchet I., Grima-Pettenati J. (2016). Eucalyptus hairy roots, a fast, efficient and versatile tool to explore function and expression of genes involved in wood formation. Plant Biotechnology Journal, 14 (6), p. 1381-1393. ISSN 1467-7644.
Identifiant IRD : fdi:010067673 -
Popova E., Kim H. H., Saxena P. K., Engelmann Florent, Pritchard H. W. (2016). Frozen beauty : the cryobiotechnology of orchid diversity. Biotechnology Advances, 34 (4), p. 380-403. ISSN 0734-9750.
Identifiant IRD : fdi:010067599 -
Rey O., Danchin E., Mirouze Marie, Loot C., Blanchet S. (2016). Adaptation to global change : a transposable element-epigenetics perspective. Trends in Ecology and Evolution, 31 (7), p. 514-526. ISSN 0169-5347.
Identifiant IRD : fdi:010067220 -
Roncal J., Guyot Romain, Hamon Perla, Crouzillat D., Rigoreau M., Konan O. N., Rakotomalala J. J., Nowak M. D., Davis A. P., Kochko Alexandre de. (2016). Active transposable elements recover species boundaries and geographic structure in Madagascan coffee species. Molecular Genetics and Genomics, 291 (1), p. 155-168. ISSN 1617-4615.
Identifiant IRD : fdi:010066167 -
Roongsattham P., Morcillo F., Fooyontphanich K., Jantasuriyarat C., Tragoonrung S., Amblard P., Collin Myriam, Mouille G., Verdeil J. L., Tranbarger Timothy. (2016). Cellular and pectin dynamics during abscission zone development and ripe fruit abscission of the monocot oil palm. Frontiers in Plant Science, 7, 540 [15 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010066884 -
Sanin M. J., Kissling W. D., Bacon C. D., Borchsenius F., Galeano G., Svenning J. C., Olivera J., Ramirez R., Trenel P., Pintaud Jean-Christophe. (2016). The Neogene rise of the tropical Andes facilitated diversification of wax palms (Ceroxylon : Arecaceae) through geographical colonization and climatic niche separation. In :
Balslev H. (ed.), Bernal R. (ed.), Fay M.F. (ed.). Palms : emblems of tropical forests. Botanical Journal of the Linnean Society, 182 (2 (no spécial)), p. 303-317. ISSN 0024-4074.
Identifiant IRD : fdi:010068249 -
Scarcelli Nora, Mariac Cédric, Couvreur Thomas, Faye A., Richard D., Sabot François, Berthouly Cécile, Vigouroux Yves. (2016). Intra-individual polymorphism in chloroplasts from NGS data : where does it come from and how to handle it ?. Molecular Ecology Resources, 16 (2), 434-445. ISSN 1755-098X.
Identifiant IRD : fdi:010066166 -
Selvakesavan R. K., Dhanya N. N., Thushara P., Abraham S. M., Jayaraj R. S. C., Balasubramanian A., Deeparaj B., Sudha S., Sowmiya Rani K. S., Bachpai V. K. W., Ganesh D., Diagne N., Laplaze Laurent, Gherbi Hassen, Svistoonoff Sergio, Hocher Valérie, Franche Claudine, Bogusz Didier, Nambiar-Veetil M. (2016). Intraspecies variation in sodium partitioning, potassium and proline accumulation under salt stress in Casuarina equisetifolia Forst. Symbiosis, 70 (1), p. 117-127. ACTINO : International Meeting on Frankia and Actinorhizal Plant, 18., Montpellier (FRA), 2015/08/24-27. ISSN 0334-5114.
Identifiant IRD : fdi:010067738 -
Sempéré G., Philippe Florian, Dereeper Alexis, Ruiz M., Sarah G., Larmande Pierre. (2016). Gigwa - Genotype investigator for genome-wide analyses [+ erratum]. Gigascience, 5, art. 25 [9 p.+ erratum : vol. 5, art. no 48]. ISSN 2047-217X.
Identifiant IRD : fdi:010066961 -
Ta K. N., Sabot François, Adam Hélène, Vigouroux Yves, De Mita Stéphane, Ghesquière Alain, Do N. V., Gantet Pascal, Jouannic Stefan. (2016). MiR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species. Rice, 9, art. 10 [14 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010068865 -
Zehdi-Azouzi S., Cherif E., Guenni K., Ben Abdelkrim A., Bermil A., Rhouma S., Ben Salah M., Santoni S., Pintaud Jean-Christophe, Aberlenc Bertossi Frédérique, Hannachi A. S. (2016). Endemic insular and coastal Tunisian date palm genetic diversity. Genetica, 144 (2), p. 181-190. ISSN 0016-6707.
Identifiant IRD : fdi:010066730 -
Zongo C., Sabourin M., Demaret L., Gateble G., Fogliani B., Marmey Philippe. (2016). Seed characterization for propagation and conservation of Oxera pulchella subsp grandiflora (dubard) de kok, a new caledonian ornamental endemic. Propagation of Ornamental Plants, 16 (4), p. 137-145. ISSN 1311-9109.
Identifiant IRD : PAR00015592
Articles
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Addisalem A.B., Duminil Jérôme, Wouters D., Bongers F., Smulders M.J.M. (2016). Fine-scale spatial genetic structure in the frankincense tree Boswellia papyrifera (Del.) Hochst. and implications for conservation. Tree Genetics and Genomes, 12, art. no 86 [10 p.]. ISSN 0378-1127.
Identifiant IRD : fdi:010073287 -
Arguedas M., Perez A., Abdelnour A., Hernandez M., Engelmann Florent, Edel Martínez M., Yabor L., Lorenzo J.C. (2016). Short-term liquid nitrogen storage of maize, common bean and soybean seeds sodifies their biochemical composition. Agricultural Science, 4 (3), p. 6-12. ISSN 2291-4471.
Identifiant IRD : fdi:010067317 -
Cejas I., Rumlow A., Turcios A., Engelmann Florent, Edel Martínez M., Yabor L., Papenbrock J., Lorenzo J.C. (2016). Exposure of common bean seeds to liquid nitrogen modifies mineral composition of young plantlet leaves. American Journal of Plant Sciences, 7 (12), p. 1612-1617 [en ligne]. ISSN 2158-2742.
Identifiant IRD : fdi:010067316 -
David J., Glemin S., Sarah G., Nabholtz B., Sabot François, Holtz Y., Homa F., Pointet S., Contreras S., Sauné L., Ardisson M., Bacilieri R., Khadari B., Lanaud C., Pot D., Sauvage C., Scarcelli Nora, Tregear James, Vigouroux Yves, Yahiaoui N., Ruiz M., Santoni S., Labouisse J.P., Pham Jean-Louis. (2016). La diversité génétique des plantes cultivées à l'heure de l'information génétique à haut débit : génomique comparative de la domestication. In :
Apports des marqueurs moléculaires et de la génomique à l'utilisation des ressources génétiques pour l'amélioration des plantes. Le Sélectionneur Français, 67, 3-13. ISSN 0374-1621.
Identifiant IRD : fdi:010080163 -
Ngom M., Oshone R., Hurst S.G., Abebe-Abeke F., Simpson S., Morris K., Ourèye Sy M., Champion Antony, Thomas W.K., Tisa L.S. (2016). Permanent draft genome sequence for Frankia sp. strain CeD, a nitrogen-fixing actinobacterium isolated from the root nodules of Casuarina equistifolia grown in Senegal. Genome Announcements, 4 (2), art. no e00265-16 [3 p. en ligne]. ISSN 2169-8287.
Identifiant IRD : fdi:010070407 -
Oshone R., Ngom M., Abebe-Abeke F., Simpson S., Morris K., Ourèye Sy M., Champion Antony, Thomas W.K., Tisa L.S. (2016). Permanent draft genome sequence of Frankia sp. strain Allo2, a salt-tolerant nitrogen-fixing Actinobacterium isolated from the root nodules of Allocasuarina. Genome Announcements, 4 (3), art. no e00388-16 [3 p. en ligne]. ISSN 2169-8287.
Identifiant IRD : fdi:010070408 -
Tosso F., Doucet J.L., Kaymak E., Daïnou K., Duminil Jérôme, Hardy O.J. (2016). Microsatellite development for the genus Guibourtia (Fabaceae, Caesalpinioideae) reveals diploid and polyploid species. Applications in Plant Sciences, 4 (7), art. no 1600029 [4 p.]. ISSN 2168-0450.
Identifiant IRD : fdi:010073288 -
Zango O., Rey H., Bakasso Y., Lecoustre R., Aberlenc Frédérique. (2016). Local practices and knowledge associated with date palm cultivation in southeastern Niger. Agricultural Sciences, 7 (9), 586-603. ISSN 2156-8553.
Identifiant IRD : fdi:010083459
Directions d'ouvrages ou de revues
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Wunsche J. N. (ed.), Tranbarger Timothy (ed.). (2016). Proceedings of international symposia on abscission processes in horticulture and non-destructive assessment of fruit attributes.
Louvain : ISHS, 340 p. (Acta Horticulturae ; 1119). International Horticultural Congress on Horticulture : Sustaining Lives, Livelihoods and Landscapes : International Symposia on Abscission Processes in Horticulture and Non-Destructive Assessment of Fruit Attributes, 29., Brisbane (AUS), 2014/08/17-22. ISBN 9789462611177. ISSN 0567-7572.
Identifiant IRD : fdi:010072266
Ouvrages
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Couturon Emmanuel, Raharimalala N.E., Rakotomalala J.J., Hamon Serge, Kochko Alexandre de, Guyot Romain, Hamon Perla. (2016). Caféiers sauvages : un trésor en péril au coeur des forêts tropicales ! = Wild coffee-trees : a threatened treasure in the heart of tropical forests !.
Montpellier : Association Biodiversité, Ecovalorisation et Caféiers, 117 p. ISBN 978-2-7466-9109-4.
Identifiant IRD : fdi:010067198
Chapitres ou parties d'ouvrages
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Faye A., Sonké B., Couvreur Thomas. (2016). Dynamique évolutive des forêts tropicales humides d'Afrique centrale. In :
Saulieu Geoffroy de (ed.), Elouga M. (ed.), Sonké B. (ed.). Pour une écologie historique en Afrique centrale. Yaoudé : AUF ; IRD, p. 95-120.
Identifiant IRD : fdi:010069868 -
Le Ngoc L., Tireau A., Venkatesan A., Neveu P., Larmande Pierre. (2016). Development of a knowledge system for Big Data : case study to plant phenotyping data. In :
WIMS'16 : international conference on web intelligence, mining and semantics. New York : ACM, art. no 27 [9 p.]. (International Conference Proceedings Series). WIMS'16 : International Conference on Web Intelligence, Mining and Semantics, Nîmes (FRA), 2016/06/13-15. ISBN 978-1-4503-4056-4.
Identifiant IRD : fdi:010067401 -
Leponce M., Novotny V., Pascal O., Robillard T., Legendre F., Villemant C., Munzinger Jérôme, Molino Jean-François, Drew R., Odegaard F., Schmidl J., Tishechkin A., Sam K., Bickel D., Dahl C., Damas K., Fayle T.M., Gewa B., Jacquemin J., Keltim M., Klimes P., Koane B., Kua J., Mantilleri A., Mogia M., Molem K., Moses J., Nowatuo H., Orivel J., Pintaud Jean-Christophe, Roisin Y., Sam L., Siki B., Soldati L., Soulier-Perkins A., Tulai S., Yombai J., Wardhaugh C., Basset Y. (2016). Land module of Our Planet Reviewed - Papua New Guinea : aims, methods and first taxonomical results. In :
Robillard T. (ed.), Legendre F. (ed.), Villemant C. (ed.), Leponce M. (ed.). Insects of Mount Wilhelm, Papua New Guinea. Paris : MNHN, p. 11-48. (Mémoires du Muséum national d'Histoire naturelle ; 209). ISBN 978-2-85653-784-8.
Identifiant IRD : fdi:010069107 -
Sarrazin F., Pham Jean-Louis, Reboud X., Lecomte J. (2016). Conséquences évolutives des approches par services écosystémiques. In :
Roche P. (coord.), Geijzendorffer I. (coord.), Levrel H. (coord.), Maris V. (coord.). Valeurs de la biodiversité et services écosystémiques : perspectives interdisciplinaires. Paris : Quae, p. 131-142. (Update Sciences et Technologies). ISBN 978-2-7592-2442-5. ISSN 1773-7923.
Identifiant IRD : fdi:010070145
Colloques, congrès, séminaires
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Jonquet C., Toulet A., Arnaud E., Aubin S., Dzalé Yeumo E., Emonet V., Pesce V., Larmande Pierre. (2016). AgroPortal : an open repository of ontologies and vocabularies for agriculture and nutrition data.
Montpellier : LIRMM, 3 p. multigr. GODAN.Global Open Data for Agriculture and Nutrition Summit, New York (USA), 2016/09/15-16.
Identifiant IRD : fdi:010067428 -
Jonquet C., Toulet A., Arnaud E., Aubin S., Dzalé Yeumo E., Emonet V., Pesce V., Larmande Pierre. (2016). Reusing the NCBO BioPortal technology for agronomy to build AgroPortal. In :
Jaiswal P. (ed.), Hoehndorf R. (ed.), Arighi C. (ed.), Meier A. (ed.). ICBO : International Conference on Biomedical Ontologies. Corvallis : ICBO, 3 p. International Conference on Biomedical Ontologies : Demo Session, 7., Corvallis (USA), 2016/08/01-04.
Identifiant IRD : fdi:010067429
Autres publications, littérature grise
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Vidal Laurent (coord.), Brehmer Patrice (collab.), Broutin H. (collab.), Cissé I. (collab.), Cissé R. (collab.), Clermont Dauphin Cathy (collab.), Cournac Laurent (collab.), DaCosta H. (collab.), Deguenonvo Cédric (collab.), Descroix Luc (collab.), Dia A.T. (collab.), Diagne K. (collab.), Diallo I. (collab.), Diongue M. (collab.), Diao Camara A. (collab.), Fall A.S. (collab.), Fall M. (collab.), Faye B. (collab.), Faye I. (collab.), Faye O. (collab.), Gaye N. (collab.), Gaye O. (collab.), Jacquemin Mélanie (collab.), Kane A. (collab.), Kane C. (collab.), Laplaze Laurent (collab.), Masse Dominique (collab.), Mbaye M. (collab.), Mendy A. (collab.), Ndiaye J.L. (collab.), Ndiaye S. (collab.), Ndour N.Y. (collab.), Ndoye I. (collab.), Ngom Sow F. (collab.), Niang A. (collab.), Poussin Jean-Christophe (collab.), Sall M. (collab.), Sall Sy D. (collab.), Seck A. (collab.), Sokhna Cheikh (collab.), Touré A. (collab.), Wade I. (collab.). (2016). Etude prospective en soutien à la programmation européenne conjointe : rapport final [Etat des connaissances scientifiques sur les grands enjeux du développement, scénarios d'évolution au Sénégal].
Dakar : IRD, 117 p. multigr.
Identifiant IRD : fdi:010067188
2015
Articles référencés dans le Web of Science
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Allié E., Pélissier Raphaël, Engel J., Petronelli P., Freycon V., Deblauwe Vincent, Soucemarianadin L., Weigel J., Baraloto C. (2015). Pervasive local-scale tree-soil habitat association in a tropical forest community. Plos One, 10 (11), e0141488 [16 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010065467 -
Arbelaez J. D., Moreno L. T., Singh N., Tung C. W., Maron L. G., Ospina Y., Martinez C. P., Grenier C., Lorieux Mathias, McCouch S. (2015). Development and GBS-genotyping of introgression lines (ILs) using two wild species of rice, O. meridionalis and O. rufipogon, in a common recurrent parent, O. sativa cv. Curinga. Molecular Breeding, 35 (2), p. art. 81 [18 p.]. ISSN 1380-3743.
Identifiant IRD : fdi:010063964 -
Baroux C., Autran Daphné. (2015). Chromatin dynamics during cellular differentiation in the female reproductive lineage of flowering plants. Plant Journal, 83 (1), p. 160-176. ISSN 0960-7412.
Identifiant IRD : fdi:010064816 -
Bellafiore Stéphane, Jougla C., Chapuis Elodie, Besnard G., Suong M., Vu P. N., De Waele D., Gantet Pascal, Thi X. N. (2015). Intraspecific variability of the facultative meiotic parthenogenetic root-knot nematode (Meloidogyne graminicola) from rice fields in Vietnam. Comptes Rendus Biologies, 338 (7), p. 471-483. ISSN 1631-0691.
Identifiant IRD : fdi:010064807 -
Bertrand B., Bardil A., Baraille H., Dussert Stéphane, Doulbeau Sylvie, Dubois E., Severac D., Dereeper Alexis, Etienne H. (2015). The greater phenotypic homeostasis of the allopolyploid Coffea arabica improved the transcriptional homeostasis over that of both diploid parents. Plant and Cell Physiology, 56 (10), p. 2035-2051. ISSN 0032-0781.
Identifiant IRD : fdi:010065464 -
Beulé T., Agbessi M. D. T., Dussert Stéphane, Jaligot E., Guyot Romain. (2015). Genome-wide analysis of LTR-retrotransposons in oil palm. Bmc Genomics, 16, 795. ISSN 1471-2164.
Identifiant IRD : fdi:010065385 -
Carro L., Pujic P., Alloisio N., Fournier P., Boubakri H., Hay A. E., Poly F., Francois Philippe, Hocher Valérie, Mergaert P., Balmand S., Rey M., Heddi A., Normand P. (2015). Alnus peptides modify membrane porosity and induce the release of nitrogen-rich metabolites from nitrogen-fixing Frankia. ISME Journal, 9 (8), p. 1723-1733. ISSN 1751-7362.
Identifiant IRD : fdi:010064843 -
Cejas I., Rivas M., Napoles L., Marrero P., Yabor L., Aragon C., Perez A., Engelmann Florent, Martinez-Montero M. E., Lorenzo J. C. (2015). Impact of liquid nitrogen exposure on selected biochemical and structural parameters of hydrated Phaseolus vulgaris L. seeds. Cryoletters, 36 (3), p. 149-157. ISSN 0143-2044.
Identifiant IRD : fdi:010064736 -
Champion Antony, Lucas Mikaël, Tromas Alexandre, Vaissayre Virginie, Crabos Amandine, Diedhiou I., Prodjinoto H., Moukouanga Daniel, Pirolles Elodie, Cissoko M., Bonneau Jocelyne, Gherbi Hassen, Franche Claudine, Hocher Valérie, Svistoonoff Sergio, Laplaze Laurent. (2015). Inhibition of auxin signaling in Frankia species-infected cells in Casuarina glauca nodules leads to increased nodulation. Plant Physiology, 167 (3), 1149-1157. ISSN 0032-0889.
Identifiant IRD : fdi:010064640 -
Chaparro C., Gayraud T., Souza R.F. de, Domingues D.S., Akaffou S., Laforga Vanzela A.L., Kochko Alexandre de, Rigoreau M., Crouzillat D., Hamon Serge, Hamon Perla, Guyot Romain. (2015). Terminal-repeat retrotransposons with GAG domain in plant genomes : a new testimony on the complex world of transposable elements. Genome Biology and Evolution, 7 (2), p. 493-504. ISSN 1759-6653.
Identifiant IRD : fdi:010063587 -
Clavijo F., Diedhiou I., Vaissayre Virginie, Brottier L., Acolatse J., Moukouanga Daniel, Crabos Amandine, Auguy Florence, Franche Claudine, Gherbi Hassen, Champion Antony, Hocher Valérie, Barker D., Bogusz Didier, Tisa L. S., Svistoonoff Sergio. (2015). The Casuarina NIN gene is transcriptionally activated throughout Frankia root infection as well as in response to bacterial diffusible signals. New Phytologist, 208 (3), p. 887-903. ISSN 0028-646X.
Identifiant IRD : fdi:010065498 -
Combes Marie-Christine, Hueber Yann, Dereeper Alexis, Rialle S., Herrera J. C., Lashermes Philippe. (2015). Regulatory divergence between parental alleles determines gene expression patterns in hybrids. Genome Biology and Evolution, 7 (4), p. 1110-1121. ISSN 1759-6653.
Identifiant IRD : fdi:010064653 -
Coomes O.T., McGuire S.J., Garine E., Caillon S., McKey D., Demeulenaere E., Jarvis D., Aistara G., Barnaud Adeline, Clouvel P., Emperaire Laure, Louafi S., Martin P., Massol F., Pautasso M., Violon C., Wencélius J. (2015). Farmer seed networks make a limited contribution to agriculture ? Four common misconceptions. Food Policy, 56, p. 41-50. ISSN 0306-9192.
Identifiant IRD : fdi:010065147 -
Cordeiro L. D., Simoes-Gurgel C., Albarello N., Engelmann Florent. (2015). Cryopreservation of in vitro-grown shoot tips of Cleome rosea Vahl (Cleomaceae) using the V cryo-plate technique. In Vitro Cellular and Developmental Biology-Plant, 51 (6), p. 688-695. ISSN 1054-5476.
Identifiant IRD : fdi:010065477 -
Coudert Y., Le V. A. T., Adam Hélène, Bes M., Vignols Florence, Jouannic Stefan, Guiderdoni E., Gantet Pascal. (2015). Identification of CROWN ROOTLESS1-regulated genes in rice reveals specific and conserved elements of postembryonic root formation. New Phytologist, 206 (1), p. 243-254. ISSN 0028-646X.
Identifiant IRD : fdi:010064013 -
Couvreur Thomas. (2015). Odd man out : why are there fewer plant species in African rain forests ?. Plant Systematics and Evolution, 301 (5), 1299-1313. ISSN 0378-2697.
Identifiant IRD : fdi:010064133 -
Couvreur Thomas, Daniel Kissling W., Condamine F.L., Svenning J.C., Rowe N.P., Baker W.J. (2015). Global diversification of a tropical plant growth form : environmental correlates and historical contingencies in climbing palms. Frontiers in Genetics, 5, 452 [18 p.]. ISSN 1664-8021.
Identifiant IRD : fdi:010082012 -
Couvreur Thomas, Niangadouma R., Sonké B., Sauquet H. (2015). Sirdavidia, an extroardinary new genus of Annonaceae from Gabon. PhytoKeys, 46, p. 1-19. ISSN 1314-2011.
Identifiant IRD : fdi:010063340 -
Dereeper Alexis, Bocs S., Rouard M., Guignon V., Ravel Sébastien, Dubreuil Tranchant Christine, Poncet Valérie, Garsmeur O., Lashermes Philippe, Droc G. (2015). The coffee genome hub : a resource for coffee genomes. Nucleic Acids Research, 43 (D1), D1028-D1035. ISSN 0305-1048.
Identifiant IRD : fdi:010064052 -
Dufey I., Draye X., Lutts S., Lorieux Mathias, Martinez C., Bertin P. (2015). Novel QTLs in an interspecific backcross Oryza sativa x Oryza glaberrima for resistance to iron toxicity in rice. Euphytica, 204 (3), p. 609-625. ISSN 0014-2336.
Identifiant IRD : fdi:010064749 -
Duitama J., Silva A., Sanabria Y., Cruz D. F., Quintero C., Ballen C., Lorieux Mathias, Scheffler B., Farmer A., Torres E., Oard J., Tohme J. (2015). Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection. Plos One, 10 (4), p. e0124617 [20 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010064194 -
Errouane K., Doulbeau Sylvie, Vaissayre Virginie, Leblanc Olivier, Collin Myriam, Kaid-Harche M., Dussert Stéphane. (2015). The embryo and the endosperm contribute equally to argan seed oil yield but confer distinct lipid features to argan oil. Food Chemistry, 181, p. 270-276. ISSN 0308-8146.
Identifiant IRD : fdi:010064114 -
Fahr M., Laplaze Laurent, El Mzibri M., Doumas P., Bendaou N., Hocher Valérie, Bogusz Didier, Smouni A. (2015). Assessment of lead tolerance and accumulation in metallicolous and non-metallicolous populations of Hirschfeldia incana. Environmental and Experimental Botany, 109, p. 186-192. ISSN 0098-8472.
Identifiant IRD : fdi:010063116 -
Feuillassier Lionel, Masanet P., Romans P., Barthelemy D., Engelmann Florent. (2015). Towards a vitrification-based cryopreservation protocol for the coral Pocillopora damicornis L. : tolerance of tissue balls to 4.5 M cryoprotectant solutions. Cryobiology, 71 (2), p. 224-235. ISSN 0011-2240.
Identifiant IRD : fdi:010065343 -
Fourcade F., Pouteau Robin, Jaffré Tanguy, Marmey Philippe. (2015). In situ observations of the basal angiosperm Amborella trichopoda reveal a long fruiting cycle overlapping two annual flowering periods. Journal of Plant Research, 128 (5), p. 821-828. ISSN 0918-9440.
Identifiant IRD : fdi:010064946 -
Haider M. S., Khan I. A., Jaskani M. J., Naqvi S. A., Hameed M., Azam M., Khan A. A., Pintaud Jean-Christophe. (2015). Assessment of morphological attributes of date palm accessions of diverse agro-ecological origin. Pakistan Journal of Botany, 47 (3), p. 1143-1151. ISSN 0556-3321.
Identifiant IRD : fdi:010064955 -
Hutin Mathilde, Sabot François, Ghesquière Alain, Koebnik Ralf, Szurek Boris. (2015). A knowledge-based molecular screen uncovers a broad-spectrum OsSWEET14 resistance allele to bacterial blight from wild rice. Plant Journal, 84 (4), 694-703. ISSN 0960-7412.
Identifiant IRD : fdi:010066114 -
Icard-Vernière Christèle, Bedo A., Dussert Stéphane, Mouquet Rivier Claire. (2015). Essential fatty acids in the traditional diet of young children in Burkina Faso. Annals of Nutrition and Metabolism, 67 (Suppl. 1), p. 153 (no 149/672). European Nutrition Conference (FENS), 12., Berlin (GER), 2015/10/20-23. ISSN 0250-6807.
Identifiant IRD : fdi:010066820 -
Jalloul A., Sayegh M., Champion Antony, Nicole Michel. (2015). Bacterial blight of cotton. Phytopathologia Mediterranea, 54 (1), p. 3-20. ISSN 0031-9465.
Identifiant IRD : fdi:010064151 -
Jiang Q. B., Ma Y. Z., Zhong C. L., Zeng B. S., Zhang Y., Pinyopusarerk K., Bogusz Didier, Franche Claudine. (2015). Optimization of the conditions for Casuarina cunninghamiana Miq. genetic transformation mediated by Agrobacterium tumefaciens. Plant Cell Tissue and Organ Culture, 121 (1), p. 195-204. ISSN 0167-6857.
Identifiant IRD : fdi:010064063 -
Khong G. N., Pati P. K., Richaud F., Parizot B., Bidzinski P., Mai C. D., Bes M., Bourrie I., Meynard D., Beeckman T., Selvaraj M. G., Manabu I., Genga A. M., Brugidou Christophe, Do V. N., Guiderdoni E., Morel J. B., Gantet Pascal. (2015). OsMADS26 negatively regulates resistance to pathogens and drought tolerance in rice. Plant Physiology, 169 (4), p. 2935-2949. ISSN 0032-0889.
Identifiant IRD : fdi:010066136 -
Landey R. B., Cenci Alberto, Guyot Romain, Bertrand B., Georget F., Dechamp E., Herrera J. C., Aribi Jamel, Lashermes Philippe, Etienne H. (2015). Assessment of genetic and epigenetic changes during cell culture ageing and relations with somaclonal variation in Coffea arabica. Plant Cell Tissue and Organ Culture, 122 (3), p. 517-531. ISSN 0167-6857.
Identifiant IRD : fdi:010064917 -
Laplaze Laurent, Lucas Mikaël, Champion Antony. (2015). Rhizobial root hair infection requires auxin signaling. Trends in Plant Science, 20 (6), p. 332-334. ISSN 1360-1385.
Identifiant IRD : fdi:010064763 -
Larrieu A., Champion Antony, Legrand J., Lavenus J., Mast D., Brunoud G., Oh J., Guyomarc'h S., Pizot Maxime, Farmer E. E., Turnbull C., Vernoux T., Bennett M. J., Laplaze Laurent. (2015). A fluorescent hormone biosensor reveals the dynamics of jasmonate signalling in plants. Nature Communications, 6, p. art. 6043 [8 p.]. ISSN 2041-1723.
Identifiant IRD : fdi:010063729 -
Lavenus J., Goh T., Guyomarc'h S., Hill K., Lucas Mikaël, Voss U., Kenobi K., Wilson M. H., Farcot E., Hagen G., Guilfoyle T. J., Fukaki H., Laplaze Laurent, Bennett M. J. (2015). Inference of the Arabidopsis lateral root gene regulatory network suggests a bifurcation mechanism that defines primordia flanking and central zones. Plant Cell, 27 (5), p. 1368-1388. ISSN 1040-4651.
Identifiant IRD : fdi:010064790 -
Markovic Z., Preiner D., Stupic D., Andabaka Z., Simon S., Voncina D., Maletic E., Kontic J. K., Chatelet P., Engelmann Florent. (2015). Cryopreservation and cryotherapy of grapevine (Vitis vinifera L.). Vitis, 54 (Special Issue), p. 247-251. ISSN 0042-7500.
Identifiant IRD : fdi:010065505 -
Massoni J., Couvreur Thomas, Sauquet H. (2015). Five major shifts of diversification through the long evolutionary history of Magnoliidae (angiosperms). Bmc Evolutionary Biology, 15, 49 [14 p.]. ISSN 1471-2148.
Identifiant IRD : fdi:010064085 -
Matsumoto T., Yamamoto S., Fukui K., Rafique T., Engelmann Florent, Niino T. (2015). Cryopreservation of persimmon shoot tips from dormant buds using the D cryo-plate technique. Horticulture Journal, 84 (2), p. 106-110. ISSN 2189-0102.
Identifiant IRD : fdi:010064162 -
Ming R., VanBuren R., Wai C. M., Tang H. B., Schatz M. C., Bowers J. E., Lyons E., Wang M. L., Chen J., Biggers E., Zhang J. S., Huang L. X., Zhang L. M., Miao W. J., Zhang J., Ye Z. Y., Miao C. Y., Lin Z. C., Wang H., Zhou H. Y., Yim W. C., Priest H. D., Zheng C. F., Woodhouse M., Edger P. P., Guyot Romain, Guo H. B., Guo H., Zheng G. Y., Singh R., Sharma A., Min X. J., Zheng Y., Lee H., Gurtowski J., Sedlazeck F. J., Harkess A., McKain M. R., Liao Z. Y., Fang J. P., Liu J., Zhang X. D., Zhang Q., Hu W. C., Qin Y., Wang K., Chen L. Y., Shirley N., Lin Y. R., Liu L. Y., Hernandez A. G., Wright C. L., Bulone V., Tuskan G. A., Heath K., Zee F., Moore P. H., Sunkar R., Leebens-Mack J. H., Mockler T., Bennetzen J. L., Freeling M., Sankoff D., Paterson A. H., Zhu X. G., Yang X. H., Smith J. A. C., Cushman J. C., Paull R. E., Yu Q. Y. (2015). The pineapple genome and the evolution of CAM photosynthesis. Nature Genetics, 47 (12), p. 1435-1442 + 3 p. d'annexes : online methods. ISSN 1061-4036.
Identifiant IRD : fdi:010065534 -
Monat Cécile, Dubreuil Tranchant Christine, Kougbeadjo A., Farcy C., Ortega-Abboud E., Amanzougarene S., Ravel S., Agbessi M., Orjuela-Bouniol J., Summo M., Sabot François. (2015). TOGGLE : toolbox for generic NGS analyses. Bmc Bioinformatics, 16, art. 374 [8 p.]. ISSN 1471-2105.
Identifiant IRD : fdi:010065444 -
Moumouni K. H., Kountche B. A., Jean M., Hash C. T., Vigouroux Yves, Haussmann B. I. G., Belzile F. (2015). Construction of a genetic map for pearl millet, Pennisetum glaucum (L.) R. Br., using a genotyping-by-sequencing (GBS) approach. Molecular Breeding, 35 (1), p. art. 5 [10 p.]. ISSN 1380-3743.
Identifiant IRD : fdi:010063913 -
Naqvi S. A., Khan I. A., Pintaud Jean-Christophe, Jaskani M. J., Ali A. (2015). Morphological characterization of pakistani date palm (Phoenix dactylifera l.) genotypes. Pakistan Journal of Agricultural Sciences, 52 (3), p. 645-650. ISSN 0552-9034.
Identifiant IRD : fdi:010065362 -
Nguyen T. D., Lacombe Séverine, Bangratz Martine, Ta H. A., Vinh D. N., Gantet Pascal, Brugidou Christophe. (2015). P2 of Rice grassy stunt virus (RGSV) and p6 and p9 of Rice ragged stunt virus (RRSV) isolates from Vietnam exert suppressor activity on the RNA silencing pathway. Virus Genes, 51 (2), p. 267-275. ISSN 0920-8569.
Identifiant IRD : fdi:010065308 -
Pariasca-Tanaka J., Lorieux Mathias, He C., McCouch S., Thomson M. J., Wissuwa M. (2015). Development of a SNP genotyping panel for detecting polymorphisms in Oryza glaberrima/O. sativa interspecific crosses. Euphytica, 201 (1), p. 67-78. ISSN 0014-2336.
Identifiant IRD : fdi:010063146 -
Poncet Valérie, Scutt C., Tournebize R., Villegente M., Cueff G., Rajjou L., Balliau T., Zivy M., Fogliani B., Job C., Kochko Alexandre de, Sarramegna-Burtet V., Job D. (2015). The Amborella vacuolar processing enzyme family. Frontiers in Plant Science, 6, art. 618 [11 p.].
Identifiant IRD : fdi:010065149 -
Rebolledo M. C., Dingkuhn M., Courtois B., Gibon Y., Clement-Vidal A., Cruz D. F., Duitama J., Lorieux Mathias, Luquet D. (2015). Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping. Journal of Experimental Botany, 66 (18), p. 5555-5566. ISSN 0022-0957.
Identifiant IRD : fdi:010065302 -
Roncal Julissa, Couderc Marie, Baby Patrice, Kahn Francis, Millan B., Meerow A. W., Pintaud Jean-Christophe. (2015). Palm diversification in two geologically contrasting regions of western Amazonia. Journal of Biogeography, 42 (8), p. 1503-1513. ISSN 0305-0270.
Identifiant IRD : fdi:010064820 -
Santos F. C., Guyot Romain, do Valle C. B., Chiari L., Techio V. H., Heslop-Harrison P., Vanzela A. L. L. (2015). Chromosomal distribution and evolution of abundant retrotransposons in plants : gypsy elements in diploid and polyploid Brachiaria forage grasses. Chromosome Research, 23 (3), p. 571-582. ISSN 0967-3849.
Identifiant IRD : fdi:010065489 -
Silva Dias Elaine, Hatt Clémence, Hamon Perla, Hamon Serge, Rigoreau M., Crouzillat D., Carareto C.M.A., Kochko Alexandre de, Guyot Romain. (2015). Large distribution and high sequence identity of a Copia‑type retrotransposon in angiosperm families. Plant Molecular Biology, 89 (1-2), p. 83-97. ISSN 0167-4412.
Identifiant IRD : fdi:010064998 -
Sto I. M., Orr R. J. S., Fooyontphanich K., Jin X., Knutsen J. M. B., Fischer U., Tranbarger Timothy, Nordal I., Aalen R. B. (2015). Conservation of the abscission signaling peptide IDA during Angiosperm evolution : withstanding genome duplications and gain and loss of the receptors HAE/HSL2. Frontiers in Plant Science, 6, p. art. 931 [12 p.]. ISSN 1664-462X.
Identifiant IRD : fdi:010065447 -
Sylvestre Isabelle, Engelmann Florent. (2015). Cryopreservation of in vitro-grown shoot tips of Clinopodium odorum using aluminium cryo-plates. In Vitro Cellular & Developmental Biology-Plant, 51 (2), p. 185-191. ISSN 1054-5476.
Identifiant IRD : fdi:010064146 -
Teixiera da Silva J. A., Kim H., Engelmann Florent. (2015). Chrysanthemum low-temperature storage and cryopreservation : a review. Plant Cell Tissue and Organ Culture, 120 (2), p. 423-440. ISSN 0167-6857.
Identifiant IRD : fdi:010063925 -
Thomas M., Verzelen N., Barbillon P., Coomes O. T., Caillon S., McKey D., Elias M., Garine E., Raimond C., Dounias Edmond, Jarvis D., Wencelius J., Leclerc C., Labeyrie V., Cuong P. H., Hue N. T. N., Sthapit B., Rana R. B., Barnaud Adeline, Violon C., Reyes L. M. A., Moreno L. L., De Santis P., Massol F. (2015). A network-based method to detect patterns of local crop biodiversity : validation at the species and infra-species levels. In :
Woodward G. (ed.), Bohan D.A.G. (ed.). Ecosystem services : from biodiversity to society. Part 1. 53, p. 259-320. ISBN 978-0-12-803885-7.
Identifiant IRD : fdi:010066925 -
VanBuren R., Zeng F. C., Chen C. X., Zhang J. S., Wai C. M., Han J., Aryal R., Gschwend A. R., Wang J. P., Na J. K., Huang L. X., Zhang L. M., Miao W. J., Gou J. Q., Arro J., Guyot Romain, Moore R. C., Wang M. L., Zee F., Charlesworth D., Moore P. H., Yu Q. Y., Ming R. (2015). Origin and domestication of papaya Y-h chromosome. Genome Research, 25 (4), p. 524-533. ISSN 1088-9051.
Identifiant IRD : fdi:010064149 -
Voss U., Wilson M. H., Kenobi K., Gould P. D., Robertson F. C., Peer W. A., Lucas Mikaël, Swarup K., Casimiro I., Holman T. J., Wells D. M., Peret B., Goh T., Fukaki H., Hodgman T. C., Laplaze Laurent, Halliday K. J., Ljung K., Murphy A. S., Hall A. J., Webb A. A. R., Bennett M. J. (2015). The circadian clock rephases during lateral root organ initiation in Arabidopsis thaliana. Nature Communications, 6, p. art. 7641 [9 p.]. ISSN 2041-1723.
Identifiant IRD : fdi:010064916 -
Vujovic T., Chatelet P., Ruzic D., Engelmann Florent. (2015). Cryopreservation of Prunus spp. using aluminium cryo-plates. Scientia Horticulturae, 195, p. 173-182. ISSN 0304-4238.
Identifiant IRD : fdi:010065504 -
Zehdi-Azouzi S., Cherif E., Moussouni S., Gros-Balthazard M., Naqvi S. A., Ludena B., Castillo K., Chabrillange Nathalie, Bouguedoura N., Bennaceur M., Si-Dehbi F., Abdoulkader S., Daher A., Terral J. F., Santoni S., Ballardini M., Mercuri A., Ben Salah M., Kadri K., Othmani A., Littardi C., Salhi-Hannachi A., Pintaud Jean-Christophe, Aberlenc Bertossi Frédérique. (2015). Genetic structure of the date palm (Phoenix dactylifera) in the Old World reveals a strong differentiation between eastern and western populations. Annals of Botany, 116 (1), p. 101-112. ISSN 0305-7364.
Identifiant IRD : fdi:010064768
Articles
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Rubin J., Brockes J., Galliot B., Grossniklaus U., Lobo D., Mainardi M., Mirouze Marie, Prochiantz A., Steger A. (2015). A dynamic architecture of life. F1000Research, 4, art. no 1288 [17 p. en ligne]. ISSN 2046-1402.
Identifiant IRD : fdi:010067228 -
Vigouroux Yves. (2015). Adaptation du mil à la sécheresse. In :
Ardoin-Bardin Sandra (ed.), Arnaud N. (ed.), Boutin S. (ed.), Chotte Jean-Luc (ed.), Jarne P. (ed.), Kosuth P. (ed.), Lebaron P. (ed.), Servat Eric (ed.). Changement climatique : impacts et adaptations. Les Dossiers d'Agropolis International, 20, p. 79. ISSN 1628-4240.
Identifiant IRD : fdi:010063582
Directions d'ouvrages ou de revues
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Masse Dominique (coord.), Chotte Jean-Luc (coord.), Scopel E., Barnaud Adeline, Barthès Bernard, Berthouly Cécile, Chapuis Lardy Lydie, Seghieri Josiane, Serpantié Georges, Vigouroux Yves, et al. (2015). L'ingénierie écologique pour une agriculture durable dans les zones arides et semi-arides d'Afrique de l'Ouest.
Montpellier : CSFD/Agropolis International, 64 p. (Les Dossiers Thématiques du CSFD ; 11). ISSN 1772-6964.
Identifiant IRD : fdi:010066477
Chapitres ou parties d'ouvrages
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Bernoux Martial, Vigouroux Yves, Duponnois Robin, Emperaire Laure, Lalou Richard, Michon Geneviève. (2015). Le développement agricole à l'aune du changement climatique. In :
Reinert M., Janicot Serge (ed.), Aubertin Catherine (ed.), Bernoux Martial (ed.), Dounias Edmond (ed.), Guégan Jean-François (ed.), Lebel Thierry (ed.), Mazurek Hubert (ed.), Sultan Benjamin (ed.), Sokona Y. (pref.), Moatti Jean-Paul (pref.). Changement climatique : quels défis pour le Sud ?. Marseille : IRD, p. 205-217. ISBN 978-2-7099-2168-8.
Identifiant IRD : fdi:010069589 -
Bernoux Martial, Vigouroux Yves, Duponnois Robin, Emperaire Laure, Lalou Richard, Michon Geneviève. (2015). Agricultural development measured against climate change. In :
Reinert M., Janicot Serge (ed.), Aubertin Catherine (ed.), Bernoux Martial (ed.), Dounias Edmond (ed.), Guégan Jean-François (ed.), Lebel Thierry (ed.), Mazurek Hubert (ed.), Sultan Benjamin (ed.), Sokona Y. (pref.), Moatti Jean-Paul (pref.). Climate change : what challenges for the South ?. Marseille : IRD, p. 205-217. ISBN 978-2-7099-2172-5.
Identifiant IRD : fdi:010069679 -
Diagne N., Ngom M., Djighali P.I., Ngom D., Ndour B., Cissokho M., Ndigue Faye M., Sarr A., Sy M.O., Laplaze Laurent, Champion Antony. (2015). Remediation of heavy metal-contaminated soils and enhancement of their fertility with actinorhizal plants. In :
Sherametti A. (ed.), Varma A. (ed.). Heavy metal contamination of soils : monitoring and remediation. Cham : Springer, p. 355-366. (Soil Biology ; 44). ISBN 978-3-319-14525-9. ISSN 1613-3382.
Identifiant IRD : fdi:010070458 -
Hamon Perla, Hamon Serge, Razafinarivo Norosoa J., Guyot Romain, Siljak-Yakovlev S., Couturon Emmanuel, Crouzillat D., Rigoreau M., Akaffou S., Rakotomalala J.J., Kochko Alexandre de. (2015). Coffea genome organization and evolution. In :
Preedy V. (ed.). Coffee in health and disease prevention. San Diego : Academic Press, p. 29-37. ISBN 978-0-12-409517-5.
Identifiant IRD : fdi:010063204 -
Hamon Perla, Rakotomalala J.J., Akaffou S., Razafinarivo Norosoa J., Couturon Emmanuel, Guyot Romain, Crouzillat D., Hamon Serge, Kochko Alexandre de. (2015). Caffeine-free species in the genus Coffea. In :
Preedy V. (ed.). Coffee in health and disease prevention. San Diego : Academic Press, p. 39-44. ISBN 978-0-12-409517-5.
Identifiant IRD : fdi:010063205 -
Mueller L., Strickler S., Domingues D., Pereira L., Andrade A., Marraccini P., Ming R., Wai J., Albert V., Giuliano G., Fiore A., Pietrella M., Aprea G., Descombes P., Moine D., Guyot Romain, Poncet Valérie, Hamon Perla, Hamon Serge, Dubreuil Tranchant Christine, Couturon Emmanuel, Kochko Alexandre de, Lepelley M., Bellanger L., Merot-L'Anthoene V., Vandecasteele C., Rigoreau M., Crouzillat D., Paschoal Rossi A., Sankoff D., Zheng C., Kuhn G., Korlach J., Chin J. (2015). Towards a better understanding of the Coffea arabica genome structure. In :
Proceedings of the 25th international conference on coffee science. ASIC, p 42-45. International Conference on Coffe Science, 25., Armenia (COL), 2015/09/08-13. ISBN 978-2-900212-24-0.
Identifiant IRD : fdi:010065067 -
Svistoonoff Sergio, Tromas A., Diagne N., Alloisio N., Laplaze Laurent, Champion Antony, Bogusz Didier, Bonneau Jocelyne, Hocher Valérie. (2015). How transcriptomics revealed new information on actinorhizal symbioses establishment and evolution. In :
De Bruijn F.J. (ed.). Biological nitrogen fixation. Chichester : Wiley - Blackwell, p. 425-431. ISBN 978-1-119-05309-5.
Identifiant IRD : fdi:010070405
Colloques, congrès, séminaires
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Jonquet C., Dzalé-Yeumo E., Arnaud E., Larmande Pierre. (2015). AgroPortal : a proposition for ontology-based services in the agronomic domain.
Montpellier : LIRMM, 5 p. multigr. IN-OVIVE'15 : Atelier INtégration de Sources/Masses de Données Hétérogènes et Ontologies, dans le Domaine des Sciences du VIVant et de l'Environnement, 3., Rennes (FRA), 2015/06.
Identifiant IRD : fdi:010063854 -
Venkatesan A., El Hassouni N., Philippe F., Pommier C., Quesneville H., Ruiz M., Larmande Pierre. (2015). Towards efficient data integration and knowledge management in the Agronomic domain. In :
Actes APIA : Applications Pratiques de l'Intelligence Artificielle. Grenoble : AFIA, p. 117-124. Conférence sur les Applications Pratiques de l'Intelligence Artificielle, 1, Rennes (FRA), 2015/06/29-2015/06/03.
Identifiant IRD : fdi:010067275
Thèses, mémoires, diplômes
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Feuillassier Lionel. (2015). La cryoconservation : un outil performant pour la sauvegarde des coraux en danger : son application à Pocillopora damicornis.
Montpellier : Université de Montpellier, 322 p. multigr. Th. Sci. : Biol. Intégrative des Plantes, Université de Montpellier. 2015/09/29.
Identifiant IRD : fdi:010065032 -
Pintaud Jean-Christophe. (2015). Phylogénie et diversité génétique des palmiers : de la signature du forçage paléoclimatique et géologique à l'empreinte de l'Homme.
Montpellier : IRD, 175 p. multigr. Mém. HDR.Habilitation à Diriger des Recherches, Univ. de Montpellier. 2015/07/03.
Identifiant IRD : fdi:010077224 -
Sabot François. (2015). Habilitaton à diriger des recherches.
Montpellier : IRD, 86 p. multigr. Mém. HDR, Univ. de Montpeller 2. 2015/06/17.
Identifiant IRD : fdi:010063830
Autres publications, littérature grise
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Franche Claudine, Duponnois Robin. (2015). Gestion des microorganismes symbiotiques pour une restauration durable de la productivité des agrosystèmes tropicaux et méditerranéens. In :
Roose Eric (ed.). Restauration de la productivité des sols tropicaux et méditerranéens : contribution à l'agroécologie. Montpellier : IRD, p. 243-248 multigr.
Identifiant IRD : fdi:010064973
2014
Articles référencés dans le Web of Science
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Aberlenc Bertossi Frédérique, Castillo K., Dubreuil Tranchant Christine, Cherif E., Ballardini M., Abdoulkder S., Gros-Balthazard M., Chabrillange Nathalie, Santoni S., Mercuri A., Pintaud Jean-Christophe. (2014). In silico mining of microsatellites in coding sequences of the date palm (Arecaceae) genome, characterization, and transferability. Applications in Plant Sciences, 2 (1), art. 1300058 [5 p.]. ISSN 2168-0450.
Identifiant IRD : fdi:010062585 -
Adler S., Verdeil J. L., Lartaud M., Fock-Bastide I., Joët Thierry, Conejero G., Noirot Michel. (2014). Morphological and histological impacts of the laurina mutation on fructification and seed characteristics in Coffea arabica L.. Trees : Structure and Function, 28 (2), p. 585-595. ISSN 0931-1890.
Identifiant IRD : fdi:010061873 -
Ahmadi N., Audebert A., Bennett M. J., Bishopp A., de Oliveira A. C., Courtois B., Diedhiou A., Dievart A., Gantet Pascal, Ghesquière Alain, Guiderdoni E., Henry A., Inukai Y., Kochian L., Laplaze Laurent, Lucas Mikaël, Luu D. T., Manneh B., Mo X. R., Muthurajan R., Perin C., Price A., Robin S., Sentenac H., Sine B., Uga Y., Very A. A., Wissuwa M., Wu P., Xu J. (2014). The roots of future rice harvests. Rice, 7, art. 29 [9 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010063663 -
Bakasso Y., Zaman-Allah M., Mariac Cédric, Billot C., Vigouroux Yves, Zongo J. D., Saadou M. (2014). Genetic diversity and population structure in a collection of roselle (Hibiscus sabdariffa L.) from Niger. Plant Genetic Resources-Characterization and Utilization, 12 (2), p. 207-214. ISSN 1479-2621.
Identifiant IRD : PAR00012455 -
Barraco G., Sylvestre Isabelle, Collin Myriam, Escoute J., Lartaud M., Verdeil J. L., Engelmann Florent. (2014). Histocytological analysis of yam (Dioscorea alata) shoot tips cryopreserved by encapsulation-dehydration. Protoplasma, 251 (1), p. 177-189. ISSN 0033-183X.
Identifiant IRD : fdi:010061494 -
Castano Felipe, Stauffer F., Marquinez X., Crevecoeur M., Collin Myriam, Pintaud Jean-Christophe, Tregear James. (2014). Floral structure and development in the monoecious palm Gaussia attenuata (Arecaceae ; Arecoideae). Annals of Botany, 114 (7), p. 1483-1495. ISSN 0305-7364.
Identifiant IRD : fdi:010062693 -
Couvreur Thomas. (2014). Revision of the African genus Uvariastrum (Annonaceae). Phytokeys, 33, 1-40. ISSN 1314-2011.
Identifiant IRD : fdi:010062062 -
Denoeud F., Carretero-Paulet L., Dereeper Alexis, Droc G., Guyot Romain, Pietrella M., Zheng C. F., Alberti A., Anthony François, Aprea G., Aury J. M., Bento P., Bernard M., Bocs S., Campa Claudine, Cenci Alberto, Combes Marie-Christine, Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert Stéphane, Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joët Thierry, Labadie K., Lan T. Y., Leclercq J., Lepelley M., Leroy T., Li L. T., Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G., Poncet Valérie, Pot D., Priyono, Rigoreau M., Rouard M., Rozas J., Dubreuil Tranchant Christine, Van Buren R., Zhang Q., Andrade A. C., Argout X., Bertrand B., Kochko Alexandre de, Graziosi G., Henry R. J., Jayarama, Ming R., Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V. A., Wincker P., Lashermes Philippe. (2014). The coffee genome provides insight into the convergent evolution of caffeine biosynthesis. Science, 345 (6201), 1181-1184. ISSN 0036-8075.
Identifiant IRD : fdi:010062514 -
Diédhiou I., Tromas Alexandre, Cissoko M., Gray Krystelle, Parizot B., Crabos Amandine, Alloisio N., Fournier P., Carro L., Svistoonoff Sergio, Gherbi Hassen, Hocher Valérie, Diouf D., Laplaze Laurent, Champion Antony. (2014). Identification of potential transcriptional regulators of actinorhizal symbioses in Casuarina glauca and Alnus glutinosa. BMC Plant Biology, 14, 342. ISSN 1471-2229.
Identifiant IRD : fdi:010063619 -
Domenech B., Asmussen-Lange C. B., Baker W. J., Alapetite E., Pintaud Jean-Christophe, Nadot S. (2014). A phylogenetic analysis of palm subtribe Archontophoenicinae (Arecaceae) based on 14 DNA regions. Botanical Journal of the Linnean Society, 175 (4), p. 469-481. ISSN 0024-4074.
Identifiant IRD : fdi:010062401 -
El Baidouri M., Carpentier M. C., Cooke R., Gao D. Y., Lasserre E., Llauro C., Mirouze Marie, Picault N., Jackson S. A., Panaud O. (2014). Widespread and frequent horizontal transfers of transposable elements in plants. Genome Research, 24 (5), p. 831-838. ISSN 1088-9051.
Identifiant IRD : fdi:010061986 -
Engelmann Florent. (2014). Cryopreservation of clonal crops : a review of key parameters. In :
Reed B.M. (ed.). II International Symposium on Plant Cryopreservation proceedings. Louvain : ISHS, p. 31-39. (ISHS Acta Horticulturae ; 1039). International Symposium on Plant Cryopreservation, 2., Fort Collins (USA), 2014/06. ISBN 9789462610279.
Identifiant IRD : fdi:010072203 -
Faye A., Pintaud Jean-Christophe, Baker W. J., Sonke B., Couvreur Thomas. (2014). A plastid phylogeny of the African rattans (Ancistrophyllinae, Arecaceae). Systematic Botany, 39 (4), p. 1099-1107. ISSN 0363-6445.
Identifiant IRD : fdi:010062635 -
Feuillassier L., Romans P., Sylvestre Isabelle, Masanet P., Barthelemy D., Engelmann Florent. (2014). Tolerance of apexes of coral Pocillopora damicornis L. to cryoprotectant solutions. Cryobiology, 68 (1), p. 96-106. ISSN 0011-2240.
Identifiant IRD : fdi:010061832 -
Feuillassier Lionel, Martinez L., Romans P., Sylvestre Isabelle, Masanet P., Barthélémy D., Engelmann Florent. (2014). Survival of tissue balls from the coral Pocillopora damicornis L. exposed to cryoprotectant solutions. Cryobiology, 69 (3), p. 376-385. ISSN 0011-2240.
Identifiant IRD : fdi:010063160 -
Fischer Iris, Dainat J., Ranwez V., Glemin S., Dufayard J. F., Chantret N. (2014). Impact of recurrent gene duplication on adaptation of plant genomes. Bmc Plant Biology, 14, p. art. 151. ISSN 1471-2229.
Identifiant IRD : fdi:010062330 -
Fock-Bastide I., Palama T. L., Bory S., Lecolier A., Noirot Michel, Joët Thierry. (2014). Expression profiles of key phenylpropanoid genes during Vanilla planifolia pod development reveal a positive correlation between PAL gene expression and vanillin biosynthesis. Plant Physiology and Biochemistry, 74, p. 304-314. ISSN 0981-9428.
Identifiant IRD : fdi:010061811 -
Jaligot E., Hooi W. Y., Debladis E., Richaud F., Beule T., Collin Myriam, Agbessi M. D. T., Sabot François, Garsmeur O., D'Hont A., Alwee S. S. R. S., Rival A. (2014). DNA methylation and expression of the EgDEF1 gene and neighboring retrotransposons in mantled somaclonal variants of oil palm. Plos One, 9 (3), e91896 [14 p.]. ISSN 1932-6203.
Identifiant IRD : fdi:010061928 -
Joët Thierry, Laffargue Andréina, Salmona J., Doulbeau Sylvie, Descroix F., Bertrand B., Lashermes Philippe, Dussert Stéphane. (2014). Regulation of galactomannan biosynthesis in coffee seeds. Journal of Experimental Botany, 65 (1), p. 323-337. ISSN 0022-0957.
Identifiant IRD : fdi:010061496 -
Karun A., Sajini K. K., Niral V., Amarnath C. H., Remya P., Rajesh M. K., Samsudeen K., Jerard B. A., Engelmann Florent. (2014). Coconut (cocos nucifera l.) pollen cryopreservation. Cryoletters, 35 (5), p. 407-417. ISSN 0143-2044.
Identifiant IRD : fdi:010063139 -
Labeyrie V., Deu M., Barnaud Adeline, Calatayud C., Buiron M., Wambugu P., Manel S., Glaszmann J. C., Leclerc C. (2014). Influence of ethnolinguistic diversity on the sorghum genetic patterns in subsistence farming systems in Eastern Kenya. Plos One, 9 (3), p. e92178. ISSN 1932-6203.
Identifiant IRD : fdi:010061926 -
Mai C. D., Phung N. T. P., To H. T. M., Gonin Mathieu, Hoang G. T., Nguyen K. L., Do V. N., Courtois B., Gantet Pascal. (2014). Genes controlling root development in rice. Rice, 7, 30 [11 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010063110 -
Manel Stéphanie, Couvreur Thomas, Munoz F., Couteron Pierre, Hardy O. J., Sonke B. (2014). Characterizing the phylogenetic tree community structure of a protected tropical rain forest area in Cameroon. Plos One, 9 (6), p. e98920. ISSN 1932-6203.
Identifiant IRD : fdi:010062369 -
Mariac Cédric, Scarcelli Nora, Pouzadou J., Barnaud Adeline, Billot C., Faye A., Kougbeadjo A., Maillol V., Martin G., Sabot François, Santoni S., Vigouroux Yves, Couvreur Thomas. (2014). Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies. Molecular Ecology Resources, 14 (6), p. 1103-1113. ISSN 1755-098X.
Identifiant IRD : fdi:010062644 -
Markovic Z., Chatelet P., Preiner D., Sylvestre Isabelle, Karoglan Kontic J., Engelmann Florent. (2014). Effect of shooting medium and source of material on grapevine (Vitis vinifera L.) shoot tip recovery after cryopreservation. CryoLetters, p. 40-47. ISSN 0143-2044.
Identifiant IRD : fdi:010061521 -
Markovic Z., Preiner D., Bosnjak A. M., Safner T., Stupic D., Andabaka Z., Maletic E., Chatelet P., Engelmann Florent, Kontic J. K. (2014). In vitro introduction of healthy and virus-infected genotypes of native Croatian grapevine cultivars. Central European Journal of Biology, 9 (11), p. 1087-1098. ISSN 1895-104X.
Identifiant IRD : fdi:010062480 -
Mirouze Marie, Vitte C. (2014). Transposable elements, a treasure trove to decipher epigenetic variation : insights from Arabidopsis and crop epigenomes. Journal of Experimental Botany, 65 (10), 2801-2812. ISSN 0022-0957.
Identifiant IRD : fdi:010062211 -
Muraro D., Mellor N., Pound M. P., Help H., Lucas Mikaël, Chopard J., Byrne H. M., Godin C., Hodgman T. C., King J. R., Pridmore T. P., Helariutta Y., Bennett M. J., Bishopp A. (2014). Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots. Proceedings of the National Academy of Sciences of the United States of America, 111 (2), p. 857-862. ISSN 0027-8424.
Identifiant IRD : fdi:010061491 -
Nabholz B., Sarah G., Sabot François, Ruiz M., Adam Hélène, Nidelet S., Ghesquière Alain, Santoni S., David J., Glemin S. (2014). Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (Oryza glaberrima). Molecular Ecology, 23 (9), 2210-2227. ISSN 0962-1083.
Identifiant IRD : fdi:010062023 -
Nguyen P. V., Bellafiore Stéphane, Petitot Anne-Sophie, Haidar R., Bak A., Abed A., Gantet Pascal, Mezzalira I., Engler J. D., Fernandez Diana. (2014). Meloidogyne incognita - rice (Oryza sativa) interaction : a new model system to study plant-root-knot nematode interactions in monocotyledons. Rice, 7, 23 [13 p.]. ISSN 1939-8425.
Identifiant IRD : fdi:010062580 -
Niino T., Wunna, Watanabe K., Nohara N., Rafique T., Yamamoto S., Fukui K., Arizaga M. V., Martinez C. R. C., Matsumoto T., Engelmann Florent. (2014). Cryopreservation of mat rush lateral buds by air dehydration using aluminum cryo-plate. Plant Biotechnology, 31 (3), p. 281-287. ISSN 1342-4580.
Identifiant IRD : fdi:010062594 -
Ogawa S., Selvaraj M. G., Fernando A. J., Lorieux Mathias, Ishitani M., McCouch S., Arbelaez J. D. (2014). N- and P-mediated seminal root elongation response in rice seedlings. Plant and Soil, 375 (1-2), p. 303-315. ISSN 0032-079X.
Identifiant IRD : fdi:010061783 -
Orjuela J., Sabot François, Chéron Sophie, Vigouroux Yves, Adam Hélène, Chrestin Harold, Sanni K., Lorieux Mathias, Ghesquière Alain. (2014). An extensive analysis of the African rice genetic diversity through a global genotyping. Theoretical and Applied Genetics, 127 (10), p. 2211-2223. ISSN 0040-5752.
Identifiant IRD : fdi:010062581 -
Ouattara B., Ndir K. N., Gueye M. C., Diedhiou I., Barnaud Adeline, Fonceka D., Cisse N., Akpo E. L., Diouf D. (2014). Genetic diversity of Jatropha curcas L. in Senegal compared with exotic accessions based on microsatellite markers. Genetic Resources and Crop Evolution, 61 (6), p. 1039-1045. ISSN 0925-9864.
Identifiant IRD : fdi:010062406 -
Phung N. T. P., Mai C. D., Mournet P., Frouin J., Droc G., Ta N. K., Jouannic Stefan, L L. T., Do V. N., Gantet Pascal, Courtois B. (2014). Characterization of a panel of Vietnamese rice varieties using DArT and SNP markers for association mapping purposes. BMC Plant Biology, 14, p. art. 371 [16 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010063620 -
Polzin F., Sylvestre Isabelle, Dechamp E., Ilbert P., Etienne H., Engelmann Florent. (2014). Effect of activated charcoal on multiplication of African yam (Dioscorea cayenensis-rotundata) nodal segments using a temporary immersion bioreactor (RITA (R)). In Vitro Cellular and Developmental Biology-Plant, 50 (2), p. 210-216. ISSN 1054-5476.
Identifiant IRD : fdi:010061944 -
Romero L. E., Lozano I., Garavito A., Carabali S. J., Triana M., Villareal N., Reyes L., Duque M. C., Martinez C. P., Calvert L., Lorieux Mathias. (2014). Major QTLs control resistance to Rice Hoja Blanca Virus and its vector Tagosodes orizicolus. G3-Genes Genomes Genetics, 4 (1), p. 133-142. ISSN 2160-1836.
Identifiant IRD : fdi:010061843 -
Sabot François. (2014). Tos17 rice element : incomplete but effective. Mobile DNA, 5 (1), art. 10 [4 p.]. ISSN 1759-8753.
Identifiant IRD : fdi:010061935 -
Saidou A. A., Clotault J., Couderc Marie, Mariac Cédric, Devos K. M., Thuillet Anne-Céline, Amoukou I. A., Vigouroux Yves. (2014). Association mapping, patterns of linkage disequilibrium and selection in the vicinity of the phytochrome C gene in pearl millet. Theoretical and Applied Genetics, 127 (1), p. 19-32. ISSN 0040-5752.
Identifiant IRD : fdi:010061735 -
Saidou A. A., Thuillet Anne-Céline, Couderc Marie, Mariac Cédric, Vigouroux Yves. (2014). Association studies including genotype by environment interactions : prospects and limits. Bmc Genetics, 15, p. art. 3. ISSN 1471-2156.
Identifiant IRD : fdi:010061961 -
Salma M., Fki L., Sylvestre Isabelle, Niino T., Engelmann Florent. (2014). Comparison of droplet-vitrification and D-cryoplate for cryopreservation of date palm (Phoenix dactylifera L.) polyembryonic masses. Scientia Horticulturae, 179, p. 91-97. ISSN 0304-4238.
Identifiant IRD : fdi:010063122 -
Salma M., Sylvestre Isabelle, Collin Myriam, Escoute J., Lartaud M., Yi J. Y., Kim H. H., Verdeil J. L., Engelmann Florent. (2014). Effect of the successive steps of a cryopreservation protocol on the structural integrity of Rubia akane Nakai hairy roots. Protoplasma, 251 (3), p. 649-659. ISSN 0033-183X.
Identifiant IRD : fdi:010061998 -
She W. J., Grimanelli Daniel, Baroux C. (2014). Anefficient method for quantitative, single-cell analysis of chromatin modification and nuclear architecture in whole-mount ovules in Arabidopsis. Jove-Journal of Visualized Experiments, (88), p. e51530 [9 p.]. ISSN 1940-087X.
Identifiant IRD : fdi:010063952 -
Siena L. A., Ortiz J. P. A., Leblanc Olivier, Pessino S. (2014). PnTgs1-like expression during reproductive development supports a role for RNA methyltransferases in the aposporous pathway. BMC Plant Biology, 14, 297 [10 p.]. ISSN 1471-2229.
Identifiant IRD : fdi:010063621 -
Sow M., Ndjiondjop M. N., Sido A., Mariac Cédric, Laing M., Bezançon Gilles. (2014). Genetic diversity, population structure and differentiation of rice species from Niger and their potential for rice genetic resources conservation and enhancement. Genetic Resources and Crop Evolution, 61 (1), p. 199-213. ISSN 0925-9864.
Identifiant IRD : fdi:010061734 -
Svistoonoff Sergio, Hocher Valérie, Gherbi Hassen. (2014). Actinorhizal root nodule symbioses : what is signalling telling on the origins of nodulation ?. Current Opinion in Plant Biology, 20, p. 11-18. ISSN 1369-5266.
Identifiant IRD : fdi:010062545 -
Weigend M., Luebert F., Gottschling M., Couvreur Thomas, Hilger H. H., Miller J. S. (2014). From capsules to nutlets-phylogenetic relationships in the Boraginales. Cladistics, 30 (5), p. 508-518. ISSN 0748-3007.
Identifiant IRD : fdi:010062698 -
Zevallos B., Cejas I., Engelmann Florent, Carputo D., Aversano R., Scarano M.T., Yanes E., Martinez-Montero M., Lorenzo J.C. (2014). Phenotypic and molecular characterization of plants regenerated from non-cryopreserved and cryopreserved wild Solanum lycopersicum Mill. seeds. CryoLetters, 35 (3), p. 216-225. ISSN 0143-2044.
Identifiant IRD : fdi:010062750
Articles
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Akaffou D.S., Konate I., Sié R.S., Poncet Valérie, Zoro Bi I.A., Legante H., Kochko Alexandre de, Hamon Serge, Hamon Perla. (2014). Flowering phenology and yield-related traits in an interspecific cross between Coffea pseudozanguebariae Bridson and C. canephora Pierre. Australian Journal of Crop Science, 8 (9), p. 1272-1280. ISSN 1835-2707.
Identifiant IRD : fdi:010062908 -
Alla-N'Nan O., Gondélé Bi E., Kouassi A.B., Kouassi A., Philippe R., Malaurie Bernard, Dollet M. (2014). Isolation of phytoplasma DNA from the coconut palms (Cocos nucifera L.) collected from Ghana. Journal of Experimental Biology and Agricultural Sciences, 2 (5), p. 495-500. ISSN 2320-8694.
Identifiant IRD : fdi:010062998 -
Alla-N'Nan O., Gonédelé Bi S., Tiécoura K., Konan Konan J.L., Malaurie Bernard. (2014). Use of plumules cryopreservation to save coconut germplasm in areas infected by lethal yellowing. African Journal of Biotechnology, 13 (16), p. 1702-1706. ISSN 1684-5315.
Identifiant IRD : fdi:010063325 -
Alla-N'Nan O., Tiécoura K., Gonédelé Bi S., Verdeil J.L., Malaurie Bernard. (2014). Ultrastructural changes during cryopreservation of plumules and embryos of coconut (Cocos nucifera L.). International Journal of Agronomy and Agricultural Research, 5 (6), p. 103-115. ISSN 2223-7054.
Identifiant IRD : fdi:010063324 -
Bandupriya H.D.D., Fernando S.C., Verdeil J.L., Malaurie Bernard. (2014). Efficient method of transporting coconut (Cocos nucifera L.) zygotic embryos for cryopreservation of plumules by encapsulation/dehydration. Cord, 30 (2), p. 19-30. ISSN 0215-1162.
Identifiant IRD : fdi:010064293 -
Barnaud Adeline, Billot C., Cruz J.F. (2014). Le fonio, un maillon essentiel de la sécurité alimentaire en Afrique de l'Ouest. In :
Agricultures familiales. Les Dossiers d'Agropolis International, 19, p. 37. ISSN 1628-4240.
Identifiant IRD : fdi:010063172 -
Garine E., Barnaud Adeline, Raimond C. (2014). Quel pourrait être le territoire des semences des sorghos que cultivent les Duupa du Massif de Poli (Nord du Cameroun) ?. In :
Raimond C. (coord), Robert T. (coord.), Garine E. (coord.). Frontières des hommes, frontières des plantes cultivées : des territoires de l'agro-diversité. Cahiers d'Outre-Mer, (265), p. 67-92. ISSN 0373-5834.
Identifiant IRD : fdi:010065673 -
Imanishi L., Perrine-Walker F.M., Ndour A., Vayssières A., Conejero G., Lucas Mikaël, Champion Antony, Laplaze Laurent, Wall L., Svistoonoff Sergio. (2014). Role of auxin during intercellular infection of Discaria trinervis by Frankia. Frontiers in Plant Science, 5, art. no 399 [9 p. en ligne]. ISSN 1664-462X.
Identifiant IRD : fdi:010070406 -
Leclerc C., Thuillet Anne-Céline. (2014). Biodiversité sauvage et cultivée et gestion des ressources naturelles. In :
Agricultures familiales. Les Dossiers d'Agropolis International, 19, p. 35. ISSN 1628-4240.
Identifiant IRD : fdi:010063171
Chapitres ou parties d'ouvrages
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Mejía K., Pintaud Jean-Christophe, Rodríguez del Castillo A.M., Santa Cruz L., Rojas-Fox J., Jímenez V., Ramirez R. (2014). Del bosque húmedo al bosque seco : adaptabilidad de las palmeras al cambio climático. In :
González Molina S. (coord.), Vacher Jean-Joinville (coord.), Grégoire Anne (ed.). El Perú frente al cambio climático : resultados de investigaciones franco-peruanas. Lima : IRD, p. 101-111. ISBN 978-2-7099-1906-7.
Identifiant IRD : fdi:010070639 -
Salas-Gismondi R., Baby Patrice, Roncal J, Junquas C., Espinoza J.C., Pintaud Jean-Christophe, Tejada J., Calderon Y., Antoine P.O., Roddaz M. (2014). Control geológico y climático del sistema Andino-Amazónico y de su biodiversidad. In :
González Molina S. (coord.), Vacher Jean-Joinville (coord.), Grégoire Anne (ed.). El Perú frente al cambio climático : resultados de investigaciones franco-peruanas. Lima : IRD, p. 19-30. ISBN 978-2-7099-1906-7.
Identifiant IRD : fdi:010070633
2013
Articles référencés dans le Web of Science
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Abdel-Lateif K., Vaissayre Virginie, Gherbi Hassen, Verries C., Meudec E., Perrine-Walker F., Cheynier V., Svistoonoff Sergio, Franche Claudine, Bogusz Didier, Hocher Valérie. (2013). Silencing of the chalcone synthase gene in Casuarina glauca highlights the important role of flavonoids during nodulation. New Phytologist, 199 (4), p. 1012-1021. ISSN 1469-8137.
Identifiant IRD : fdi:010060548 -
Al-Tam F., Adam Hélène, dos Anjos A., Lorieux Mathias, Larmande Pierre, Ghesquière Alain, Jouannic Stefan, Shahbazkia H. R. (2013). P-TRAP : a panicle trait phenotyping tool. Bmc Plant Biology, 13, p. 122. ISSN 1471-2229.
Identifiant IRD : fdi:010061184 -
Amborella Genome Project, Kochko Alexandre de (collab.), Poncet Valérie (collab.). (2013). The Amborella genome and the evolution of flowering plants. Science, 342 (6165), p. 1467 + 1241089.1-1241089.10 [en ligne]. ISSN 0036-8075.
Identifiant IRD : fdi:010060297 -
Andrianasolo D. N., Davis A. P., Razafinarivo N. J., Hamon Serge, Rakotomalala J. J., Sabatier S. A., Hamon Perla. (2013). High genetic diversity of in situ and ex situ populations of Madagascan coffee species : further implications for the management of coffee genetic resources. Tree Genetics and Genomes, 9 (5), p. 1295-1312. ISSN 1614-2942.
Identifiant IRD : fdi:010061145 -
Auguy Florence, Fahr M., Moulin Esmard Patricia, Brugel A., Laplaze Laurent, El Mzibri M., Filali-Maltouf A., Doumas P., Smouni A. (2013). Lead tolerance and accumulation in Hirschfeldia incana, a Mediterranean Brassicaceae from metalliferous mine spoils. Plos One, 8 (5), art. e61932. ISSN 1932-6203.
Identifiant IRD : fdi:010060401 -
Baker W. J., Couvreur Thomas. (2013). Global biogeography and diversification of palms sheds light on the evolution of tropical lineages. I. Historical biogeography. Journal of Biogeography, 40 (2), p. 274-285. ISSN 0305-0270.
Identifiant IRD : fdi:010058952 -
Baker W. J., Couvreur Thomas. (2013). Global biogeography and diversification of palms sheds light on the evolution of tropical lineages. II. Diversification history and origin of regional assemblages. Journal of Biogeography, 40 (2), p. 286-298. ISSN 0305-0270.
Identifiant IRD : fdi:010058951 -
Ballardini M., Mercuri A., Littardi C., Abbas S., Couderc Marie, Ludena B., Pintaud Jean-Christophe. (2013). The chloroplast DNA locus psbZ-trnfM as a potential barcode marker in Phoenix L. (Arecaceae). Zookeys, (365), p. 71-82. ISSN 1313-2989.
Identifiant IRD : fdi:010061453 -
Barnaud Adeline, Kalwij J. M., McGeoch M. A., van Vuuren B. J. (2013). Patterns of weed invasion : evidence from the spatial genetic structure of Raphanus raphanistrum. Biological Invasions, 15 (11), p. 2455-2465. ISSN 1387-3547.
Identifiant IRD : fdi:010061212 -
Baroux C., Autran Daphné, Raissig M. T., Grimanelli Daniel, Grossniklaus U. (2013). Parental contributions to the transcriptome of early plant embryos. Current Opinion in Genetics and Development, 23 (1), p. 72-74. ISSN 0959-437X.
Identifiant IRD : fdi:010060828 -
Barraco G., Sylvestre Isabelle, Iapichino G., Engelmann Florent. (2013). Investigating the cryopreservation of nodal explants of Lithodora rosmarinifolia (Ten.) Johnst., a rare, endemic Mediterranean species. Plant Biotechnology Reports, 7 (2), p. 141-146. ISSN 1863-5466.
Identifiant IRD : fdi:010060865 -
Benelli C., De Carlo A., Engelmann Florent. (2013). Recent advances in the cryopreservation of shoot-derived germplasm of economically important fruit trees of Actinidia, Diospyros, Malus, Olea, Prunus, Pyrus and Vitis. Biotechnology Advances, 31 (2), p. 175-185. ISSN 0734-9750.
Identifiant IRD : fdi:010060776 -
Brautigam K., Vining K. J., Lafon-Placette C., Fossdal C. G., Mirouze Marie, Marcos J. G., Fluch S., Fraga M. F., Guevara M. A., Abarca D., Johnsen O., Maury S., Strauss S. H., Campbell M. M., Rohde A., Diaz-Sala C., Cervera M. T. (2013). Epigenetic regulation of adaptive responses of forest tree species to the environment. Ecology and Evolution, 3 (2), p. 399-415. ISSN 2045-7758.
Identifiant IRD : fdi:010059002 -
Cherif E., Zehdi S., Castillo K., Chabrillange Nathalie, Abdoulkader S., Pintaud Jean-Christophe, Santoni S., Salhi-Hannachi A., Glemin S., Aberlenc Bertossi Frédérique. (2013). Male-specific DNA markers provide genetic evidence of an XY chromosome system, a recombination arrest and allow the tracing of paternal lineages in date palm. New Phytologist, 197 (2), p. 409-415. ISSN 0028-646X.
Identifiant IRD : fdi:010058862 -
Coudert Y., Dievart A., Droc G., Gantet Pascal. (2013). ASL/LBD phylogeny suggests that genetic mechanisms of root initiation downstream of auxin are distinct in lycophytes and euphyllophytes. Molecular Biology and Evolution, 30 (3), p. 569-572. ISSN 0737-4038.
Identifiant IRD : fdi:010059016 -
Couvreur Thomas, Baker W. J. (2013). Tropical rain forest evolution : palms as a model group. Bmc Biology, 11, p. 48. ISSN 1741-7007.
Identifiant IRD : fdi:010060833 -
De Mita S., Thuillet Anne-Céline, Gay L., Ahmadi N., Manel S., Ronfort J., Vigouroux Yves. (2013). Detecting selection along environmental gradients : analysis of eight methods and their effectiveness for outbreeding and selfing populations. Molecular Ecology, 22 (5), p. 1383-1399. ISSN 0962-1083.
Identifiant IRD : fdi:010060714 -
Dereeper Alexis, Guyot Romain, Dubreuil Tranchant Christine, Anthony François, Argout X., de Bellis F., Combes Marie-Christine, Gavory F., Kochko Alexandre de, Kudrna D., Leroy T., Poulain J., Rondeau M., Song X., Wing R., Lashermes Philippe. (2013). BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution. Plant Molecular Biology, 83 (3), p. 177-189. ISSN 0167-4412.
Identifiant IRD : fdi:010061149 -
Diagne N., Arumugam K., Ngom M., Nambiar-Veetil M., Franche Claudine, Narayanan K. K., Laplaze Laurent. (2013). Use of Frankia and actinorhizal plants for degraded lands reclamation. Biomed Research International, p. 948258. ISSN 2314-6133.
Identifiant IRD : fdi:010061303 -
Diagne N., Diouf D., Svistoonoff Sergio, Kane A., Noba K., Franche Claudine, Bogusz Didier, Duponnois Robin. (2013). Casuarina in Africa : distribution, role and importance of arbuscular mycorrhizal, ectomycorrhizal fungi and Frankia on plant development. Journal of Environmental Management, 128, p. 204-209. ISSN 0301-4797.
Identifiant IRD : fdi:010061276 -
Diagne N., Thioulouse J., Sanguin H., Prin Y., Krasova-Wade T., Sylla S., Galiana A., Baudoin Ezékiel, Neyra Marc, Svistoonoff Sergio, Lebrun Michel, Duponnois Robin. (2013). Ectomycorrhizal diversity enhances growth and nitrogen fixation of Acacia mangium seedlings. Soil Biology and Biochemistry, 57, p. 468-476. ISSN 0038-0717.
Identifiant IRD : fdi:010060824 -
Dievart A., Coudert Y., Gantet Pascal, Pauluzzi G., Puig J., Fanchon D., Ahmadi N., Courtois B., Guiderdoni E., Perin C. (2013). Dissection des bases biologiques de caractères d'intérêt chez le riz : architecture et développement du système racinaire. Cahiers Agricultures, 22 (5), 475-483. ISSN 1166-7699.
Identifiant IRD : fdi:010061234 -
Duan C. F., Argout X., Gebelin V., Summo M., Dufayard J. F., Leclercq J., Kuswanhadi, Piyatrakul P., Pirrello J., Rio M., Champion Antony, Montoro P. (2013). Identification of the Hevea brasiliensis AP2/ERF superfamily by RNA sequencing. Bmc Genomics, 14, p. 30. ISSN 1471-2164.
Identifiant IRD : fdi:010060893 -
Dussert Stéphane, Guérin C., Andersson M., Joët Thierry, Tranbarger Timothy, Pizot Maxime, Gautier Sarah, Omore A., Durand-Gasselin T., Morcillo F. (2013). Comparative transcriptome analysis of three oil palm fruit and seed tissues that differ in oil content and fatty acid composition. Plant Physiology, 162 (3), p. 1337-1358. ISSN 0032-0889.
Identifiant IRD : fdi:010060484 -
Eiserhardt W. L., Svenning J. C., Baker W. J., Couvreur Thomas, Balslev H. (2013). Dispersal and niche evolution jointly shape the geographic turnover of phylogenetic clades across continents. Scientific Reports, 3, p. 1164. ISSN 2045-2322.
Identifiant IRD : fdi:010058971 -
Fahr M., Laplaze Laurent, Bendaou N., Hocher Valérie, El Mzibri M., Bogusz Didier, Smouni A. (2013). Effect of lead on root growth. Frontiers in Plant Science, 4, p. 175. ISSN 1664-462X.
Identifiant IRD : fdi:010061480 -
Fozard J. A., Lucas Mikaël, King J. R., Jensen O. E. (2013). Vertex-element models for anisotropic growth of elongated plant organs. Frontiers in Plant Science, 4, p. 233. ISSN 1664-462X.
Identifiant IRD : fdi:010061739 -
Gonin Mathieu, Gensous S., Lagrange A., Ducousso M., Amir H., Jourand Philippe. (2013). Rhizosphere bacteria of Costularia spp. from ultramafic soils in New Caledonia : diversity, tolerance to extreme edaphic conditions, and role in plant growth and mineral nutrition. Canadian Journal of Microbiology, 59 (1), p. 164-174.
Identifiant IRD : fdi:010058585 -
Grimanelli Daniel, Roudier F. (2013). Epigenetics and development in plants : green light to convergent innovations. In :
Heard E. (ed.). Epigenetics and development. Amsterdam : Elsevier, 104, p. 189-222. ISBN 9780123914552.
Identifiant IRD : fdi:010060341 -
Hardy O. J., Born C., Budde K., Dainou K., Dauby G., Duminil J., Ewedje Eebk, Gomez Céline, Heuertz M., Koffi G. K., Lowe A. J., Micheneau C., Ndiade-Bourobou D., Pineiro R., Poncet Valérie. (2013). Comparative phylogeography of African rain forest trees : a review of genetic signatures of vegetation history in the Guineo-Congolian region. Comptes Rendus Geoscience, 345 (7-8), p. 284-296. ISSN 1631-0713.
Identifiant IRD : fdi:010061301 -
Joët Thierry, Ourcival J. M., Dussert Stéphane. (2013). Ecological significance of seed desiccation sensitivity in Quercus ilex. Annals of Botany, 111 (4), p. 693-701. ISSN 0305-7364.
Identifiant IRD : PAR00010398 -
Kam H., Laing M. D., Séré Y., Thiémélé Deless, Ghesquière Alain, Ahmadi N., Ndjiondjop M. N. (2013). Evaluation of a collection of rice landraces from Burkina Faso for resistance or tolerance to Rice yellow mottle virus. Journal of Plant Pathology, 95 (3), p. 485-492. ISSN 1125-4653.
Identifiant IRD : PAR00011168 -
Karsten M., van Vuuren B. J., Barnaud Adeline, Terblanche J. S. (2013). Population genetics of Ceratitis capitata in South Africa : implications for dispersal and pest management. Plos One, 8 (1), p. e54281. ISSN 1932-6203.
Identifiant IRD : fdi:010058967 -
Koffi Y., N'Nan-Alla O., Konan J. L. K., Malaurie Bernard, Engelmann Florent. (2013). Morphological and agronomical characteristics of coconut (Cocos nucifera L.) palms produced from in vitro cultured zygotic embryos. In Vitro Cellular and Developmental Biology-Plant, 49 (5), p. 599-604. ISSN 1054-5476.
Identifiant IRD : fdi:010061261 -
Kountche B. A., Hash C. T., Dodo H., Laoualy O., Sanogo M. D., Timbeli A., Vigouroux Yves, This D., Nijkamp R., Haussmann B. I. G. (2013). Development of a pearl millet Striga-resistant genepool : response to five cycles of recurrent selection under Striga-infested field conditions in West Africa. Field Crops Research, 154, p. 82-90. ISSN 0378-4290.
Identifiant IRD : fdi:010061411 -
Lavenus J., Goh T., Roberts I., Guyomarc'h S., Lucas Mikael, De Smet I., Fukaki H., Beeckman T., Bennett M., Laplaze Laurent. (2013). Lateral root development in Arabidopsis : fifty shades of auxin. Trends in Plant Science, 18 (8), p. 455-463. ISSN 1360-1385.
Identifiant IRD : fdi:010060595 -
Lucas Mikaël, Kenobi K., von Wangenheim D., Voss U., Swarup K., De Smet I., Van Damme D., Lawrence T., Peret B., Moscardi E., Barbeau D., Godin C., Salt D., Guyomarc'h S., Stelzer E.H.K., Maizel A., Laplaze Laurent, Bennett M.J. (2013). Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues. Proceedings of the National Academy of Sciences of the United States of America, 110 (13), p. 5229-5234. ISSN 0027-8424.
Identifiant IRD : fdi:010060885 -
Markovic Z., Chatelet P., Sylvestre Isabelle, Kontic J. K., Engelmann Florent. (2013). Cryopreservation of grapevine (Vitis vinifera L.) in vitro shoot tips. Central European Journal of Biology, 8 (10), p. 993-1000. ISSN 1895-104X.
Identifiant IRD : fdi:010060609 -
Meynard D., Mieulet D., Ben Saad R., Breitler J.C., Petit J., Gantet Pascal, Hassairi A., Guiderdoni E. (2013). Applications de la transgenèse à l'amélioration variétale du riz. Cahiers Agricultures, 22 (5), 494-505. ISSN 1166-7699.
Identifiant IRD : fdi:010061233 -
Mieulet D., Meynard D., Sire C., Petit J., Breitler J.C., Perin C., Dievart A., Divol-Malgoire F., Courtois B., Verdeil J.L., Gantet Pascal, Guiderdoni E. (2013). La transformation génétique, un outil pour l'analyse fonctionnelle du génome du riz. Cahiers Agricultures, 22 (5), p. 484-493. ISSN 1166-7699.
Identifiant IRD : fdi:010061232 -
Morcillo F., Cros D., Billotte N., Ngando-Ebongue G. F., Domonhédo H., Pizot M., Cuéllar T., Espéout S., Dhouib R., Bourgis F., Claverol S., Tranbarger Timothy, Nouy B., Arondel V. (2013). Improving palm oil quality through identification and mapping of the lipase gene causing oil deterioration. Nature Communications, 4, p. 2160. ISSN 2041-1723.
Identifiant IRD : fdi:010060628 -
Niino T., Yamamoto S.I., Fukui K., Castillo Martinez C.R., Valle Arigaza M., Matsumoto T., Engelmann Florent. (2013). Dehydration improves cryopreservation of mat rush (Juncus decipiens Nakai) basal stem buds on cryo-plates. CryoLetters, 34 (6), p. 549-560. ISSN 0143-2044.
Identifiant IRD : fdi:010060287 -
Orjuela Julie, Deless E. F. T., Kolade O., Chéron Sophie, Ghesquière Alain, Albar Laurence. (2013). A recessive resistance to Rice yellow mottle virus is associated with a rice homolog of the cpr5 gene, a regulator of active defense mechanisms. Molecular Plant-Microbe Interactions, 26 (12), 1455-1463. ISSN 0894-0282.
Identifiant IRD : fdi:010061296 -
Poncet Valérie, Munoz F., Munzinger Jérôme, Pillon Yohan, Gomez Céline, Couderc Marie, Dubreuil Tranchant Christine, Hamon Serge, Kochko Alexandre de. (2013). Phylogeography and niche modelling of the relict plant Amborella trichopoda (Amborellaceae) reveal multiple Pleistocene refugia in New Caledonia. Molecular Ecology, 22 (24), p. 6163-6178. ISSN 1365-294X.
Identifiant IRD : fdi:010060228 -
Puig J., Meynard D., Khong G. N., Pauluzzi G., Guiderdoni E., Gantet Pascal. (2013). Analysis of the expression of the AGL17-like clade of MADS-box transcription factors in rice. Gene Expression Patterns, 13 (5-6), p. 160-170. ISSN 1567-133X.
Identifiant IRD : fdi:010060432 -
Razafinarivo Norosoa, Guyot Romain, Davis A.P., Couturon Emmanuel, Hamon Serge, Crouzillat D., Rigoreau M., Dubreuil Tranchant Christine, Poncet Valérie, Kochko Alexandre de, Rakotomalala J. J., Hamon Perla. (2013). Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites [plus supplementary data]. Annals of Botany, 111 (2), p. 229-248 [+ supplementary data : 5 p.]. ISSN 0305-7364.
Identifiant IRD : fdi:010058979 -
Reinders J., Mirouze Marie, Nicolet J., Paszkowski J. (2013). Parent-of-origin control of transgenerational retrotransposon proliferation in Arabidopsis. Embo Reports, 14 (9), p. 823-828. ISSN 1469-221X.
Identifiant IRD : fdi:010060591 -
Rival A., Ilbert P., Labeyrie A., Torres E., Doulbeau Sylvie, Personne A., Dussert Stéphane, Beulé T., Durand-Gasselin T., Tregear James, Jaligot E. (2013). Variations in genomic DNA methylation during the long-term in vitro proliferation of oil palm embryogenic suspension cultures. Plant Cell Reports, 32 (3), p. 359-368. ISSN 0721-7714.
Identifiant IRD : fdi:010058994 -
Roncal Julissa, Kahn Francis, Millan B., Couvreur Thomas, Pintaud Jean-Christophe. (2013). Cenozoic colonization and diversification patterns of tropical American palms : evidence from Astrocaryum (Arecaceae). Botanical Journal of the Linnean Society, 171 (1), p. 120-139. ISSN 0024-4074.
Identifiant IRD : fdi:010058226 -
Sanin M. J., Anthelme Fabien, Pintaud Jean-Christophe, Galeano G., Bernal R. (2013). Juvenile resilience and adult longevity explain residual populations of the Andean wax palm Ceroxylon quindiuense after deforestation. Plos One, 8 (10), p. e74139. ISSN 1932-6203.
Identifiant IRD : fdi:010061229 -
Santi C., Bogusz Didier, Franche Claudine. (2013). Biological nitrogen fixation in non-legume plants. Annals of Botany, 111 (5), p. 743-767. ISSN 0305-7364.
Identifiant IRD : fdi:010060325 -
Scarcelli Nora, Couderc Marie, Baco M. N., Egah J., Vigouroux Yves. (2013). Clonal diversity and estimation of relative clone age : application to agrobiodiversity of yam (Dioscorea rotundata). BMC Plant Biology, 13, p. 178. ISSN 1471-2229.
Identifiant IRD : fdi:010061431 -
She W. J., Grimanelli Daniel, Rutowicz K., Whitehead M. W. J., Puzio M., Kotlinski M., Jerzmanowski A., Baroux C. (2013). Chromatin reprogramming during the somatic-to-reproductive cell fate transition in plants. Development, 140 (19), p. 4008-4019. ISSN 0950-1991.
Identifiant IRD : fdi:010061168 -
Spindel J., Wright M., Chen C., Cobb J., Gage J., Harrington S., Lorieux Mathias, Ahmadi N., McCouch S. (2013). Bridging the genotyping gap : using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations [+ erratum paru en janvier 2016]. Theoretical and Applied Genetics, 126 (11), p. 2699-2716 [+ erratum, 2016, 129, 1, p. 201-202]. ISSN 0040-5752.
Identifiant IRD : fdi:010061228 -
Svistoonoff Sergio, Benabdoun F. M., Nambiar-Veetil M., Imanishi L., Vaissayre Virginie, Cesari S., Diagne N., Hocher Valérie, de Billy F., Bonneau Jocelyne, Wall L., Ykhlef N., Rosenberg C., Bogusz Didier, Franche Claudine, Gherbi Hassen. (2013). The independent acquisition of plant root nitrogen-fixing symbiosis in Fabids recruited the same genetic pathway for nodule organogenesis. Plos One, 8 (5), p. e64515. ISSN 1932-6203.
Identifiant IRD : fdi:010060418 -
Taedoumg H., Hamon Perla. (2013). Three new species of Craterispermum (Rubiaceae) from the Lower Guinea Domain. Blumea, 57 (3), p. 236-242. ISSN 0006-5196.
Identifiant IRD : fdi:010060835 -
Wells D. M., Laplaze Laurent, Bennett M. J., Vernoux T. (2013). Biosensors for phytohormone quantification : challenges, solutions, and opportunities. Trends in Plant Science, 18 (5), p. 244-249. ISSN 1360-1385.
Identifiant IRD : fdi:010060372 -
Wollbrett J., Larmande Pierre, de Lamotte F., Ruiz M. (2013). Clever generation of rich SPARQL queries from annotated relational schema : application to Semantic Web Service creation for biological databases. Bmc Bioinformatics, 14, p. 126. ISSN 1471-2105.
Identifiant IRD : fdi:010060435 -
Zevallos B., Cejas I., Rodriguez R. C., Yabor L., Aragon C., Gonzalez J., Engelmann Florent, Martinez M. E., Lorenzo J. C. (2013). Biochemical characterization of ecuadorian wild Solanum lycopersicum mill. plants produced from non-cryopreserved and cryopreserved seeds. CryoLetters, 34 (4), p. 413-421. ISSN 0143-2044.
Identifiant IRD : fdi:010064602 -
Zhong C. L., Mansour S., Nambiar-Veetil M., Bogusz Didier, Franche Claudine. (2013). Casuarina glauca : a model tree for basic research in actinorhizal symbiosis. Journal of Biosciences, 38 (4), p. 815-823. ISSN 0250-5991.
Identifiant IRD : fdi:010061262
Articles
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Engelmann Sylvestre Isabelle, Engelmann Florent. (2013). Effect of 24-epibrassinolide on growth of in vitro shoot tips of different yam (Dioscorea Spp.) species. American Journal of Plant Sciences, 4 (11), p. 2271-2274. ISSN 2158-2742.
Identifiant IRD : fdi:010061601 -
Gros-Balthazard M., Newton C., Ivorra S., Tengberg M., Pintaud Jean-Christophe, Terral J.F. (2013). Origines et domestication du palmier dattier (Phoenix dactylifera L.) : état de l'art et perspectives d'étude. In :
Tengberg M. (ed.), Battesti V. (ed.), Newton C. (ed.). Le palmier dattier : origine et culture en Égypte et au Moyen-Orient. Revue d'Ethnoécologie, 4, 1524 [15 p.]. ISSN 2267-2419.
Identifiant IRD : fdi:010083661 -
Rey H.Y., Faloci M., Medina R., Dolce N., Engelmann Florent, Mroginski L. (2013). Cryopreservation of Arachis pintoi (Leguminosae) somatic embryos. CryoLetters, 34 (6), p. 571-582. ISSN 0143-2044.
Identifiant IRD : fdi:010060288 -
Thiam M., Champion Antony, Diouf D., Sy M.O. (2013). NaCl effects on In Vitro germination and growth of some senegalese cowpea (Vigna unguiculata (L.) Walp.) cultivars. ISRN Biotechnology, 2013 (art. ID 382417), 11 p. ISSN 2090-9403.
Identifiant IRD : fdi:010060015
Directions d'ouvrages ou de revues
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Gonzalez-Arnao M.T. (ed.), Engelmann Florent (ed.). (2013). Crioconservacion de plantas en America Latina y el Caribe.
San Jose : IICA, 204 p. ISBN 978-92-9248-446-0.
Identifiant IRD : fdi:010060280 -
Larmande Pierre (ed.), Arnaud E. (ed.), Mougenot I. (ed.), Jonquet C. (ed.), Libourel T. (ed.), Ruiz M. (ed.). (2013). Semantics for biodiversity (S4BioDiv2013) : proceedings of the first international workshop on semantics for biodiversity.
Montpellier : S4BioDiv, 131 p. multigr. S4BioDiv2013 : International Workshop on Semantics for Biodiversity, 1., Montpellier (FRA), 2013/05/27.
Identifiant IRD : fdi:010059634
Ouvrages
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Kahn Francis, Millan B. (2013). Las palmeras Huicungo = The Huicungo palms.
Lima ; Marseille : Universidad Nacional Mayor de San Marcos ; IRD, 173 p. ISBN 9789972465161.
Identifiant IRD : fdi:010063348
Chapitres ou parties d'ouvrages
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Bieysse D., Pham Jean-Louis, Tailliez P. (2013). Collections pour les sciences agronomiques. In :
Morand S. (dir.). Collections taxonomiques, collections vivantes et ressources génétiques pour la biodiversité. Montpellier : Agropolis International, p. 25. (Les Dossiers d'Agropolis International ; 17). ISSN 1628-4240.
Identifiant IRD : fdi:010066564 -
Engelmann Florent, Gonzalez-Arnao M.T. (2013). Introduccion a la conservacion ex situ de los recursos geneticos vegetales. In :
Gonzalez-Arnao M.T. (ed.), Engelmann Florent (ed.). Crioconservacion de plantas en America Latina y el Caribe. San Jose : IICA, p. 25-35. ISBN 978-92-9248-446-0.
Identifiant IRD : fdi:010060281 -
Engelmann Florent, Gonzalez-Arnao M.T. (2013). Conclusiones. In :
Gonzalez-Arnao M.T. (ed.), Engelmann Florent (ed.). Crioconservacion de plantas en America Latina y el Caribe. San Jose : IICA, p. 197-201. ISBN 978-92-9248-446-0.
Identifiant IRD : fdi:010060283 -
Garine E., Luxereau A., Wencelius J., Violon C., Robert T., Barnaud Adeline, Caillon S., Raimond C. (2013). De qui les variétés traditionnelles de plantes cultivées pourraient-elles être le patrimoine ? Réflexions depuis le bassin du lac Tchad. In :
Juhé Beaulaton D. (ed.), Cormier Salem Marie-Christine (ed.), Robert Pascale de (ed.), Roussel B. (ed.). Effervescence patrimoniale au Sud : entre nature et société. Marseille : IRD, p. 379-409. (Latitudes 23). ISBN 2-7099-1747-6. ISSN 1278-348X.
Identifiant IRD : fdi:010060319 -
Gonzalez-Arnao M.T., Engelmann Florent. (2013). Consideraciones teoricas y practicas para la crioconservacion de germoplasma vegetal. In :
Gonzalez-Arnao M.T. (ed.), Engelmann Florent (ed.). Crioconservacion de plantas en America Latina y el Caribe. San Jose : IICA, p. 37-51. ISBN 978-92-9248-446-0.
Identifiant IRD : fdi:010060282 -
Hocher Valérie, Alloisio N., Laplaze Laurent, Bogusz Didier, Normand P. (2013). Genomics of the root - actinorhizal symbiosis. In :
Crespi M. (ed.). Root genomics and soil interactions. Chichester : J. Wiley, p. 211-226. ISBN 978-0-470-96043-1.
Identifiant IRD : fdi:010075903 -
Lavenus J., Band L., Middleton A., Wilson M., Lucas Mikaël, Laplaze Laurent, Bennett M. (2013). Toward a virtual root : interaction of genomics and modeling to develope predictive biology approaches. In :
Crespi M. (ed.). Root genomics and soil interactions. Chichester : J. Wiley, p. 79-92. ISBN 978-0-470-96043-1.
Identifiant IRD : fdi:010075902 -
Lorieux Mathias, Garavito Andrea, Bouniol Julie, Gutierrez A., Ndjiondjop M.N., Guyot Romain, Pompilio Martinez C., Tohme J., Ghesquière Alain. (2013). Unlocking the Oryza glaberrima treasure for rice breeding in Africa. In :
Wopereis M.C.S. (ed.), Johnson D.E. (ed.), Ahmadi N. (ed.), Tollens E. (ed.), Jalloh A. (ed.). Realizing Africa's rice promise. Wallingford : CABI, p. 130-143. Realizing Africa's Rice Promise, 3., Yaoundé (CMR), 2013/10.
Identifiant IRD : fdi:010061552 -
Ndjiondjop M.N., Albar Laurence, Sow M., Yao N., Djedatin G., Thiemelé D., Ghesquière Alain. (2013). Integration of molecular markers in rice improvement : a case study on resistance to Rice Yellow Mottle Virus. In :
Wopereis M.C.S. (ed.), Johnson D.E. (ed.), Ahmadi N. (ed.), Tollens E. (ed.), Jalloh A. (ed.). Realizing Africa's rice promise. Wallingford : CABI, 161-172. Realizing Africa's Rice Promise, 3., Yaoundé (CMR), 2013/10.
Identifiant IRD : fdi:010061553 -
Pham Jean-Louis. (2013). Le projet Arcad : Agropolis Resource Center for Crop Conservation, Adaptation and Diversity. In :
Morand S. (dir.). Collections taxonomiques, collections vivantes et ressources génétiques pour la biodiversité. Montpellier : Agropolis International, p. 43. (Les Dossiers d'Agropolis International ; 17). ISSN 1628-4240.
Identifiant IRD : fdi:010066565 -
Pham Jean-Louis. (2013). Les formations à Agropolis International dans le domaine des collections. In :
Morand S. (dir.). Collections taxonomiques, collections vivantes et ressources génétiques pour la biodiversité. Montpellier : Agropolis International, p. 72. (Les Dossiers d'Agropolis International ; 17). ISSN 1628-4240.
Identifiant IRD : fdi:010066570 -
Pham Jean-Louis, Thuillet Anne-Céline. (2013). Définition d'un indice d'enrichissement des collections ex situ de ressources phytogénétiques pour l'alimentation et l'agriculture. In :
Morand S. (dir.). Collections taxonomiques, collections vivantes et ressources génétiques pour la biodiversité. Montpellier : Agropolis International, p. 70. (Les Dossiers d'Agropolis International ; 17). ISSN 1628-4240.
Identifiant IRD : fdi:010066569 -
Razafinarivo Norosoa Josiane, Brown S., Bourge M., Davis A.P., Hamon Serge, Couturon Emmanuel, Kochko Alexandre de, Dubreuil Tranchant Christine, Guyot Romain, Poncet Valérie, Crouzillat D., Rigoreau M., Rakatomalala J.J., Hamon Perla. (2013). Coffea L. genome size and genetic diversity using nuclear microsatellite markers across Africa and the Indian Ocean Islands. In :
Proceedings of the 24th international conference on coffee science. San José : ASIC, p. 569-575. International Conference on Coffee Science, 24., San José (CRI), 2012/11/11-16. ISBN 978-2-900212-23-3.
Identifiant IRD : fdi:010060131 -
Tromas Alexandre, Diagne Nathalie, Diedhiou I., Prodjinoto H., Cissoko Maimouna, Crabos Amandine, Diouf D., Sy M.O., Champion Antony, Laplaze Laurent. (2013). Establishment of actinorhizal symbioses. In :
Aroca R. (ed.). Symbiotic endophytes. Berlin : Springer-Verlag, p. 89-101. (Soil Biology). ISBN 978-3-642-39316-7.
Identifiant IRD : fdi:010060016
2012
Articles référencés dans le Web of Science
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Akaffou D.S., Hamon Perla, Doulbeau Sylvie, Keli J., Legnate H., Campa Claudine, Hamon Serge, Kochko Alexandre de, Zoro B.I.A. (2012). Inheritance and relationship between key agronomic and quality traits in an interspecific cross between Coffea pseudozanguebariae Bridson and C-canephora Pierre. Tree Genetics and Genomes, 8 (5), p. 1149-1162. ISSN 1614-2942.
Identifiant IRD : fdi:010057244 -
Barnaud Adeline, Vignes H., Risterucci A. M., Noyer J. L., Pham Jean-Louis, Blay Carole, Buiron Marylène, Vigouroux Yves, Billot C. (2012). Development of nuclear microsatellite markers for the fonio, digitaria exilis (poaceae), an understudied west african cereal. American Journal of Botany, 99 (3), p. E105-E107. ISSN 0002-9122.
Identifiant IRD : fdi:010055748 -
Barraco G., Chatelet P., Balsemin E., Decourcelle T., Sylvestre Isabelle, Engelmann Florent. (2012). Cryopreservation of Prunus cerasus through vitrification and replacement of cold hardening with preculture on medium enriched with sucrose and/or glycerol. Scientia Horticulturae, 148, p. 104-108. ISSN 0304-4238.
Identifiant IRD : fdi:010060688 -
Beauchemin N.J., Furnholm T., Lavenus J., Svistoonoff Sergio, Doumas Patrick, Bogusz Didier, Laplaze Laurent, Tisa L.S. (2012). Casuarina root exudates alter the physiology, surface properties, and plant infectivity of Frankia sp Strain CcI3. Applied and Environmental Microbiology, 78 (2), p. 575-580. ISSN 0099-2240.
Identifiant IRD : fdi:010054316 -
Bertrand B., Boulanger R., Dussert Stéphane, Ribeyre F., Berthiot L., Descroix F., Joët Thierry. (2012). Climatic factors directly impact the volatile organic compound fingerprint in green Arabica coffee bean as well as coffee beverage quality. Food Chemistry, 135 (4), p. 2575-2583. ISSN 0308-8146.
Identifiant IRD : fdi:010057300 -
Bocco R., Lorieux Mathias, Seck P.A., Futakuchi K., Manneh B., Baimey H., Ndjiondjop M.N. (2012). Agro-morphological characterization of a population of introgression lines derived from crosses between IR 64 (Oryza sativa indica) and TOG 5681 (Oryza glaberrima) for drought tolerance. Plant Science, 183, p. 65-76. ISSN 0168-9452.
Identifiant IRD : fdi:010054376 -
Bucher E., Reinders J., Mirouze Marie. (2012). Epigenetic control of transposon transcription and mobility in Arabidopsis. Current Opinion in Plant Biology, 15 (5), p. 503-510. ISSN 1369-5266.
Identifiant IRD : fdi:010057933 -
Campa Claudine, Mondolot L., Rakotondravao A., Bidel L. P. R., Gargadennec A., Couturon Emmanuel, La Fisca P., Rakotomalala J. J., Jay-Allemand C., Davis A. P. (2012). A survey of mangiferin and hydroxycinnamic acid ester accumulation in coffee (Coffea) leaves : biological implications and uses. Annals of Botany, 110 (3), p. 595-613. ISSN 0305-7364.
Identifiant IRD : PAR00009118 -
Carrier G., Le Cunff L., Dereeper Alexis, Legrand D., Sabot François, Bouchez O., Audeguin L., Boursiquot J. M., This P. (2012). Transposable elements are a major cause of somatic polymorphism in Vitis vinifera L. Plos One, 7 (3), p. e32973. ISSN 1932-6203.
Identifiant IRD : fdi:010055801 -
Cejas I., Vives K., Laudat T., Gonzalez-Olmedo J., Engelmann Florent, Martinez-Montero M. E., Lorenzo J. C. (2012). Effects of cryopreservation of Phaseolus vulgaris L. seeds on early stages of germination. Plant Cell Reports, 31 (11), p. 2065-2073. ISSN 0721-7714.
Identifiant IRD : fdi:010057284 -
Chatrou L. W., Pirie M. D., Erkens R. H. J., Couvreur Thomas, Neubig K. M., Abbott J. R., Mols J. B., Maas J. W., Saunders R. M. K., Chase M. W. (2012). A new subfamilial and tribal classification of the pantropical flowering plant family Annonaceae informed by molecular phylogenetics. Botanical Journal of the Linnean Society, 169 (1), p. 5-40. ISSN 0024-4074.
Identifiant IRD : fdi:010055814 -
Clotault J., Thuillet Anne-Céline, Buiron Marylene, De Mita Stéphane, Couderc Marie, Haussmann B. I. G., Mariac Cédric, Vigouroux Yves. (2012). Evolutionary history of pearl millet (Pennisetum glaucum [L.] R. Br.) and selection on flowering genes since its domestication. Molecular Biology and Evolution, 29 (4), p. 1199-1212. ISSN 0737-4038.
Identifiant IRD : fdi:010055805 -
Cock J.M., Sterck L., Ahmed S., Allen A. E., Amoutzias G., Anthouard V., Artiguenave F., Arun A., Aury J. M., Badger J. H., Beszteri B., Billiau K., Bonnet E., Bothwell J. H., Bowler C., Boyen C., Brownlee C., Carrano C. J., Charrier B., Cho G. Y., Coelho S. M., Collen J., Le Corguille G., Corre E., Dartevelle L., Da Silva C., Delage L., Delaroque N., Dittami S. M., Doulbeau Sylvie, Elias M., Farnham G., Gachon C. M. M., Godfroy O., Gschloessl B., Heesch S., Jabbari K., Jubin C., Kawai H., Kimura K., Kloareg B., Kuepper F. C., Lang D., Le Bail A., Luthringer R., Leblanc C., Lerouge P., Lohr M., Lopez P. J., Macaisne N., Martens C., Maumus F., Michel G., Miranda-Saavedra D., Morales J., Moreau H., Motomura T., Nagasato C., Napoli C. A., Nelson D. R., Nyvall-Collen P., Peters A. F., Pommier C., Potin P., Poulain J., Quesneville H., Read B., Rensing S.A., Ritter A., Rousvoal S., Samanta M., Samson G., Schroeder D.C., Scornet D., Segurens B., Strittmatter M., Tonon T., Tregear James, Valentin K., Von Dassow P., Yamagishi T., Rouze P., Van de Peer Y., Wincker P. (2012). The Ectocarpus genome and brown algal genomics. In :
Piganeau G. (ed.). Genomic insights into the biology of algae. Academic Press - Elsevier Science, p. 141-184. (Advances in Botanical Research). ISBN 0065-2296978-0-12-391499-6.
Identifiant IRD : fdi:010058980 -
Couvreur Thomas, Maas P. J. M., Meinke S., Johnson D. M., Kessler P. J. A. (2012). Keys to the genera of Annonaceae. Botanical Journal of the Linnean Society, 169 (1), p. 74-83. ISSN 0024-4074.
Identifiant IRD : fdi:010055836 -
De Mita Stéphane, Siol M. (2012). EggLib : processing, analysis and simulation tools for population genetics and genomics. Bmc Genetics, 13, p. 27. ISSN 1471-2156.
Identifiant IRD : fdi:010055894 -
De Smet I., White P. J., Bengough A. G., Dupuy L., Parizot B., Casimiro I., Heidstra R., Laskowski M., Lepetit M., Hochholdinger F., Draye X., Zhang H. M., Broadley M. R., Peret B., Hammond J. P., Fukaki H., Mooney S., Lynch J. P., Nacry P., Schurr U., Laplaze Laurent, Benfey P., Beeckman T., Bennett M. (2012). Analyzing lateral root development : how to move forward. Plant Cell, 24 (1), p. 15-20. ISSN 1040-4651.
Identifiant IRD : fdi:010055660 -
Dussert Stéphane, Couturon Emmanuel, Engelmann Florent, Joët Thierry. (2012). Biologie de la conservation des semences de caféiers : aspects fondamentaux et conséquences pratiques : une revue. Cahiers Agriculture, 21 (2-3), p. 106-114. ISSN 1166-7699.
Identifiant IRD : fdi:010056109 -
Erkens R. H. J., Chatrou L. W., Couvreur Thomas. (2012). Radiations and key innovations in an early branching angiosperm lineage (Annonaceae; Magnoliales). Botanical Journal of the Linnean Society, 169 (1), p. 117-134. ISSN 0024-4074.
Identifiant IRD : fdi:010055812 -
Federici F., Dupuy L., Laplaze Laurent, Heisler M., Haseloff J. (2012). Integrated genetic and computation methods for in planta cytometry. Nature Methods, 9 (5), p. 483-U104. ISSN 1548-7091.
Identifiant IRD : PAR00008940 -
Grimanelli Daniel. (2012). Epigenetic regulation of reproductive development and the emergence of apomixis in angiosperms. Current Opinion in Plant Biology, 15 (1), p. 57-62. ISSN 1369-5266.
Identifiant IRD : fdi:010055668 -
Guyomarc'h S., Leran S., Auzon-Cape M., Perrine-Walker F., Lucas Mikaël, Laplaze Laurent. (2012). Early development and gravitropic response of lateral roots in Arabidopsis thaliana. Philosophical Transactions of the Royal Society B. Biological Sciences, 367 (1595), p. 1509-1516. ISSN 0962-8436.
Identifiant IRD : fdi:010055848 -
Guyot Romain, Lefebvre-Pautigny F., Dubreuil Tranchant Christine, Rigoreau M., Hamon Perla, Leroy T., Hamon Serge, Poncet Valérie, Crouzillat D., Kochko Alexandre de. (2012). Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades. Bmc Genomics, 13, p. 103. ISSN 1471-2164.
Identifiant IRD : fdi:010055958 -
Ilina E. L., Logachov A. A., Laplaze Laurent, Demchenko N. P., Pawlowski K., Demchenko K. N. (2012). Composite Cucurbita pepo plants with transgenic roots as a tool to study root development. Annals of Botany, 110 (2), p. 479-489. ISSN 0305-7364.
Identifiant IRD : fdi:010057087 -
Jiang Q.B., Zhang Y., Zhong C.L., Zeng B.S., Bogusz Didier, Franche Claudine. (2012). Establishment of an in vitro plant regeneration protocol for Casuarina cunninghamiana Miq. via indirect organogenesis. New Forests, 43 (2), p. 143-154. ISSN 0169-4286.
Identifiant IRD : fdi:010054390 -
Joët Thierry, Pot D., Dussert Stéphane, Marraccini P. (2012). Identification des déterminants moléculaires de la qualité du café par des approches de génomique fonctionnelle : une revue. Cahiers Agriculture, 21 (2-3), p. 125-133. ISSN 1166-7699.
Identifiant IRD : fdi:010056110 -
Kim H.H., Popova E., Shin D.J., Yi J.Y., Kim C.H., Lee J.S., Yoon M.K., Engelmann Florent. (2012). Cryobanking of Korean allium germplasm collections : results from a 10 year experience. Cryoletters, 33 (1), p. 45-57. ISSN 0143-2044.
Identifiant IRD : fdi:010055747 -
Kim H.H., Popova E.V., Shin D.J., Bae C.H., Baek H.J., Park S.U., Engelmann Florent. (2012). Development of a droplet-vitrification protocol for cryopreservation of Rubia akane (Nakai) hairy roots using a systematic approach. Cryoletters, 33 (6), p. 506-517. ISSN 0143-2044.
Identifiant IRD : fdi:010057937 -
Kissling W. D., Eiserhardt W. L., Baker W. J., Borchsenius F., Couvreur Thomas, Balslev H., Svenning J. C. (2012). Cenozoic imprints on the phylogenetic structure of palm species assemblages worldwide. Proceedings of the National Academy of Sciences of the United States of America, 109 (19), p. 7379-7384. ISSN 0027-8424.
Identifiant IRD : fdi:010055893 -
Kjeldsen K. U., Bataillon T., Pinel N., De Mita Stéphane, Lund M. B., Panitz F., Bendixen C., Stahl D. A., Schramm A. (2012). Purifying selection and molecular adaptation in the genome of verminephrobacter, the heritable symbiotic bacteria of earthworms. Genome Biology and Evolution, 4 (3), p. 307-315. ISSN 1759-6653.
Identifiant IRD : fdi:010055753 -
Lepelley M., Mahesh Venkataramaiah, McCarthy J., Rigoreau M., Crouzillat D., Chabrillange Nathalie, Kochko Alexandre de, Campa Claudine. (2012). Characterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae). Planta, 236 (1), p. 313-326. ISSN 0032-0935.
Identifiant IRD : fdi:010056115 -
Lertpanyasampatha M., Gao L., Kongsawadworakul P., Viboonjun U., Chrestin Hervé, Liu R. Y., Chen X. M., Narangajavana J. (2012). Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing. Planta, 236 (2), p. 437-445. ISSN 0032-0935.
Identifiant IRD : fdi:010057071 -
Lorieux Mathias. (2012). MapDisto : fast and efficient computation of genetic linkage maps. Molecular Breeding, 30 (2), p. 1231-1235. ISSN 1380-3743.
Identifiant IRD : fdi:010057137 -
Lorieux Mathias, Blein M., Lozano J., Bouniol M., Droc G., Dievart A., Perin C., Mieulet D., Lanau N., Bes M., Rouviere C., Gay C., Piffanelli P., Larmande Pierre, Michel C., Barnola I., Biderre-Petit C., Sallaud C., Perez P., Bourgis Fabienne, Ghesquière Alain, Gantet Pascal, Tohme J., Morel J. B., Guiderdoni E. (2012). In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches. Plant Biotechnology Journal, 10 (5), p. 555-568. ISSN 1467-7644.
Identifiant IRD : fdi:010055887 -
Mirouze Marie. (2012). The small RNA-based odyssey of epigenetic information in plants : from cells to species. DNA and Cell Biology, 31 (12), p. 1650-1656. ISSN 1044-5498.
Identifiant IRD : PAR00009532 -
Mirouze Marie, Lieberman-Lazarovich M., Aversano R., Bucher E., Nicolet J., Reinders J., Paszkowski J. (2012). Loss of DNA methylation affects the recombination landscape in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America, 109 (15), p. 5880-5885. ISSN 0027-8424.
Identifiant IRD : fdi:010055785 -
N'Nan Oulo, Borges M., Konan J. L. K., Hocher Valérie, Verdeil J. L., Tregear James, N'Guetta A. S. P., Engelmann Florent, Malaurie Bernard. (2012). A simple protocol for cryopreservation of zygotic embryos of ten accessions of coconut (Cocos nucifera L.). In Vitro Cellular and Developmental Biology : Plant, 48 (2), p. 160-166. ISSN 1054-5476.
Identifiant IRD : fdi:010055875 -
Péret B., Li G., Zhao J., Band L.R., Voß U., Postaire O., Luu D.T., Ines O.D., Casimiro I., Lucas Mikaël, Wells D.M., Lazzerini L., Nacry P., King J.R., Jensen O.E., Schäffner A.R., Maurel C., Bennett M.J. (2012). Auxin regulates aquaporin function to facilitate lateral root emergence [plus Supplementary information + supplementary note]. Nature Cell Biology, 14 (10), 991-998 [+ 7 p. + 25 p.]. ISSN 1465-7392.
Identifiant IRD : fdi:010078752 -
Peret B., Swarup K., Ferguson A., Seth M., Yang Y. D., Dhondt S., James N., Casimiro I., Perry P., Syed A., Yang H. B., Reemmer J., Venison E., Howells C., Perez-Amador M. A., Yun J. G., Alonso J., Beemster G. T. S., Laplaze Laurent, Murphy A., Bennett M. J., Nielsen E., Swarup R. (2012). AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development. Plant Cell, 24 (7), p. 2874-2885. ISSN 1040-4651.
Identifiant IRD : fdi:010057212 -
Poncet Valérie, Couderc Marie, Tranchant Dubreuil Christine, Gomez Céline, Hamon Perla, Hamon Serge, Pillon Y., Munzinger Jérôme, Kochko Alexandre de. (2012). Microsatellite markers for Amborella (amborellaceae), a monotypic genus endemic to New Caledonia. American Journal of Botany, 99 (10), p. E411-E414. ISSN 0002-9122.
Identifiant IRD : fdi:010057319 -
Poulicard Nils, Galzi Agnès, Traore O., Vignols F., Ghesquière Alain, Konate G., Hébrard Eugénie, Fargette Denis. (2012). Historical contingencies modulate the adaptability of Rice Yellow Mottle Virus. Plos Pathogens, 8 (1), e1002482. ISSN 1553-7366.
Identifiant IRD : fdi:010055667 -
Puig J., Pauluzzi G., Guiderdoni E., Gantet Pascal. (2012). Regulation of shoot and root development through mutual signaling. Molecular Plant, 5 (5), p. 974-983. ISSN 1674-2052.
Identifiant IRD : fdi:010057193 -
Razafinarivo Norosoa, Rakotomalala J.J., Brown S.C., Bourge M., Hamon Serge, Kochko Alexandre de, Poncet Valérie, Dubreuil Tranchant Christine, Couturon Emmanuel, Guyot Romain, Hamon Perla. (2012). Geographical gradients in the genome size variation of wild coffee trees (Coffea) native to Africa and Indian Ocean islands. Tree Genetics and Genomes, 8 (6), p. 1345-1358. ISSN 1614-2942.
Identifiant IRD : fdi:010058168 -
Roongsattham P., Morcillo F., Jantasuriyarat C., Pizot Maxime, Moussu S., Jayaweera D., Collin Myriam, Gonzalez-Carranza Z. H., Amblard P., Tregear James, Tragoonrung S., Verdeil J. L., Tranbarger Timothy. (2012). Temporal and spatial expression of polygalacturonase gene family members reveals divergent regulation during fleshy fruit ripening and abscission in the monocot species oil palm. Bmc Plant Biology, 12, p. 150. ISSN 1471-2229.
Identifiant IRD : fdi:010058241 -
Sané D., Aberlenc Bertossi Frédérique, Diatta L. I. D., Gueye B., Daher A., Sagna M., Duval Yves, Borgel Alain. (2012). Influence of growth regulators on callogenesis and somatic embryo development in date palm (Phoenix dactylifera L.) sahelian cultivars. Scientific World Journal, p. 837395. ISSN 1537-744X.
Identifiant IRD : fdi:010057066 -
Sanier C., Sayegh-Alhamdia M., Jalloul A., Clérivet Alain, Nicole Michel, Marmey Philippe. (2012). A 13-lipoxygenase is expressed early in the hypersensitive reaction of cotton plants to Xanthomonas campestris pv. malvacearum. Journal of Phytopathology, 160 (6), p. 286-293. ISSN 0931-1785.
Identifiant IRD : fdi:010055883 -
Terral J. F., Newton C., Ivorra S., Gros-Balthazard Muriel, Tito de Morais Claire, Picq S., Tengberg M., Pintaud Jean-Christophe. (2012). Insights into the historical biogeography of the date palm (Phoenix dactylifera L.) using geometric morphometry of modern and ancient seeds. Journal of Biogeography, 39 (5), p. 929-941. ISSN 0305-0270.
Identifiant IRD : fdi:010055808 -
Tranbarger Timothy, Kluabmongkol W., Sangsrakru D., Morcillo F., Tregear James, Tragoonrung S., Billotte N. (2012). SSR markers in transcripts of genes linked to post-transcriptional and transcriptional regulatory functions during vegetative and reproductive development of Elaeis guineensis. Bmc Plant Biology, 12, p. 1. ISSN 1471-2229.
Identifiant IRD : fdi:010054413 -
Tromas Alexandre, Parizot B., Diagne N., Champion Antony, Hocher Valérie, Cissoko M., Crabos Amandine, Prodjinoto H., Lahouze B., Bogusz Didier, Laplaze Laurent, Svistoonoff Sergio. (2012). Heart of endosymbioses : transcriptomics reveals a conserved genetic program among arbuscular mycorrhizal, actinorhizal and legume-rhizobial symbioses. Plos One, 7 (9), p. e44742. ISSN 1932-6203.
Identifiant IRD : fdi:010057190 -
Yi J. Y., Sylvestre Isabelle, Colin M., Salma M., Lee S. Y., Kim H. H., Park H. J., Engelmann Florent. (2012). Improved cryopreservation using droplet-vitrification and histological changes associated with cryopreservation of madder (Rubia akane nakai). Korean Journal of Horticultural Science and Technology, 30 (1), p. 79-84. ISSN 1226-8763.
Identifiant IRD : fdi:010081584 -
Zehdi S., Cherif E., Rhouma S., Santoni S., Hannachi A. S., Pintaud Jean-Christophe. (2012). Molecular polymorphism and genetic relationships in date palm (Phoenix dactylifera L.) : the utility of nuclear microsatellite markers. Scientia Horticulturae, 148, p. 255-263. ISSN 0304-4238.
Identifiant IRD : fdi:010060693
Articles
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Grimanelli Daniel. (2012). Qu'est-ce qui permet de se passer du père ?. La Recherche, (460), p. 39. ISSN 0029-5671.
Identifiant IRD : fdi:010054545
Chapitres ou parties d'ouvrages
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Engelmann Florent. (2012). Germplasm collection, storage and conservation. In :
Altman A. (ed.), Hasegawa P.M. (ed.). Plant biotechnology and Agriculture : prospects for the 21 st century. Amsterdam ; Boston : Elsevier ; Elsevier, p. 255-267. ISBN 978-0-12-381466-1.
Identifiant IRD : fdi:010054522 -
Joët Thierry, Wurtzel E.T., Matsuda F., Saito K., Dussert Stéphane. (2012). Coupled transcript-metabolite profiling : towards systems biology approaches to unravel regulation of seed secondary metabolism. In :
Agrawal G.K. (ed.), Rakwal R. (ed.). Seed development : OMICS technologies toward improvement of seed quality and crop yield. Dordrecht : Springer Science, p. 367-385. ISBN 978-9400747487.
Identifiant IRD : fdi:010059149
Colloques, congrès, séminaires
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Guyot Romain, Lefevre-Pautigny F., Tranchant Christine, Rigoreau M., Poncet Valérie, Hamon Perla, Leroy T., Hamon Serge, Crouzillat D., Kochko Alexandre de. (2012). Ancestral synteny is shared between distantly related plant species from the asterid and rosid clades. In :
International conference on coffe science. Paris : ASIC, p. 527-532. International Conference on Coffe Science, 24., San José (Costa Rica), 2012/11/12-16.
Identifiant IRD : fdi:010059341 -
Letort V., Sabatier S., Akaffou S., Hamon Serge, Hamon Perla, Reyffye P. de. (2012). Interspecific variability of biomass production of young coffea : no influence of branch pruning : experimental evidence and theoretical analysis.
s.l. : s.n., 4 p. multigr. International Symposium on Plant Growth Modeling Simulation Visualization and Applications (PMA), Shanghai (CHN), 2012/10/31-2012/11/03.
Identifiant IRD : fdi:010058050
Thèses, mémoires, diplômes
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Auguy Florence. (2012). Identification de gènes impliqués dans la tolérance au plomb chez la brassicacée Hirschfeldia incana.
Montpellier : Université Montpellier 2, 189 p. multigr. Th. univ. : Biol. Intégrative des Plantes, Université Montpellier 2. 2012/12/14.
Identifiant IRD : fdi:010058639
2011
Articles référencés dans le Web of Science
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Adam Hélène, Collin Myriam, Richaud Frédérique, Beulé Thierry, Cros D., Omore A., Nodichao L., Nouy B., Tregear James. (2011). Environmental regulation of sex determination in oil palm : current knowledge and insights from other species. Annals of Botany, 108 (8 : Special Issue : Palm Biology), p. 1529-1537. ISSN 0305-7364.
Identifiant IRD : fdi:010054184 -
Adam Hélène, Marguerettaz M., Qadri R., Adroher B., Richaud F., Collin Myriam, Thuillet Anne-Céline, Vigouroux Yves, Laufs P., Tregear James, Jouannic Stefan. (2011). Divergent expression patterns of miR164 and CUP-SHAPED COTYLEDON genes in palms and other monocots : implication for the evolution of meristem function in angiosperms. Molecular Biology and Evolution, 28 (4), p. 1439-1454. ISSN 0737-4038.
Identifiant IRD : fdi:010053464 -
Argout X., Salse J., Aury J. M., Guiltinan M. J., Droc G., Gouzy J., Allegre M., Chaparro C., Legavre T., Maximova S. N., Abrouk M., Murat F., Fouet O., Poulain J., Ruiz M., Roguet Y., Rodier-Goud M., Barbosa-Neto J. F., Sabot François, Kudrna D., Ammiraju J. S. S., Schuster S. C., Carlson J. E., Sallet E., Schiex T., Dievart A., Kramer M., Gelley L., Shi Z., Berard A., Viot C., Boccara M., Risterucci A. M., Guignon V., Sabau X., Axtell M. J., Ma Z. R., Zhang Y. F., Brown S., Bourge M., Golser W., Song X. A., Clement D., Rivallan R., Tahi M., Akaza J. M., Pitollat B., Gramacho K., D'Hont A., Brunel D., Infante D., Kebe I., Costet P., Wing R., McCombie W. R., Guiderdoni E., Quetier F., Panaud O., Wincker P., Bocs S., Lanaud C. (2011). The genome of Theobroma cacao. Nature Genetics, 43 (2), 101-108. ISSN 1061-4036.
Identifiant IRD : fdi:010053103 -
Auguy Florence, Abdel-Lateif K., Doumas Patrick, Badin P., Guerin V., Bogusz Didier, Hocher Valérie. (2011). Activation of the isoflavonoid pathway in actinorhizal symbioses. Functional Plant Biology, 38 (8-9), p. 690-696. ISSN 1445-4408.
Identifiant IRD : fdi:010053775 -
Autran Daphné, Baroux C., Raissig M.T., Lenormand T., Wittig M., Grob S., Steimer A., Barann M., Klostermeier U.C., Leblanc Olivier, Vielle-Calzada J.P., Rosenstiel P., Grimanelli Daniel, Grossniklaus U. (2011). Maternal epigenetic pathways control parental contributions to Arabidopsis early embryogenesis. Cell, 145 (5), p. 707-719. ISSN 0092-8674.
Identifiant IRD : PAR00007635 -
Baker W. J., Norup M. V., Clarkson J. J., Couvreur Thomas, Dowe J. L., Lewis C. E., Pintaud Jean-Christophe, Savolainen V., Wilmot T., Chase M. W. (2011). Phylogenetic relationships among arecoid palms (Arecaceae : Arecoideae). Annals of Botany, 108 (8 : Special Issue : Palm Biology), p. 1417-1432. ISSN 0305-7364.
Identifiant IRD : fdi:010054207 -
Balslev H., Kahn Francis, Millan B., Svenning J.C., Kristiansen T., Borchsenius F., Pedersen D., Eiserhardt W.L. (2011). Species diversity and growth forms in tropical american palm communities. Botanical Review, 77 (4), p. 381-425. ISSN 0006-8101.
Identifiant IRD : fdi:010054302 -
Barraco Giuseppe, Sylvestre Isabelle, Engelmann Florent. (2011). Comparing encapsulation-dehydration and droplet-vitrification for cryopreservation of sugarcane (Saccharum spp.) shoot tips. Scientia Horticulturae, 130 (1), p. 320-324. ISSN 0304-4238.
Identifiant IRD : fdi:010053842 -
Barraco Giuseppe, Sylvestre Isabelle, Iapichino G., Engelmann Florent. (2011). Cryopreservation of Limonium serotinum apical meristems from in vitro plantlets using droplet-vitrification. Scientia Horticulturae, 130 (1), p. 309-313. ISSN 0304-4238.
Identifiant IRD : fdi:010053841 -
Bazin J., Batlla D., Dussert Stéphane, El Maarouf Bouteau H., Bailly C. (2011). Role of relative humidity, temperature, and water status in dormancy alleviation of sunflower seeds during dry after-ripening. Journal of Experimental Botany, 62 (2), p. 627-640. ISSN 0022-0957.
Identifiant IRD : fdi:010053042 -
Beulé Thierry, Camps Céline, Debiesse Ségolène, Tranchant Christine, Dussert Stéphane, Sabau X., Jaligot Estelle, Alwee Ssrs, Tregear James. (2011). Transcriptome analysis reveals differentially expressed genes associated with the mantled homeotic flowering abnormality in oil palm (Elaeis guineensis). Tree Genetics and Genomes, 7 (1), p. 169-182. ISSN 1614-2942.
Identifiant IRD : fdi:010053162 -
Carrier G., Santoni S., Rodier-Goud M., Canaguier A., Kochko Alexandre de, Tranchant Dubreuil Christine, This P., Boursiquot J.M., Le Cunff L. (2011). An efficient and rapid protocol for plant nuclear DNA preparation suitable for next generation sequencing methods. American Journal of Botany, 98 (1), p. E13-E15. ISSN 0002-9122.
Identifiant IRD : fdi:010053128 -
Castano F., Crevecoeur M., Pintaud Jean-Christophe, Stauffer F. W. (2011). Floral structure in the neotropical palms Chelyocarpus Dammer, Cryosophila Blume and Itaya H. E. Moore (Arecaceae). Candollea, 66 (1), p. 65-79. ISSN 0373-2967.
Identifiant IRD : fdi:010054534 -
Cavel E., Pillot Marion, Pontier D., Lahmy S., Bies-Etheve N., Vega D., Grimanelli Daniel, Lagrange T. (2011). A plant-specific transcription factor IIB-related protein, pBRP2, is involved in endosperm growth control. Plos One, 6 (2), p. e17216. ISSN 1932-6203.
Identifiant IRD : fdi:010053365 -
Chair H., Duroy P. O., Cubry P., Sinsin B., Pham Jean-Louis. (2011). Impact of past climatic and recent anthropogenic factors on wild yam genetic diversity. Molecular Ecology, 20 (8), p. 1612-1623. ISSN 0962-1083.
Identifiant IRD : fdi:010053461 -
Coudert Y., Bès M., Thi Van Anh Le, Pré M., Guiderdoni E., Gantet Pascal. (2011). Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice. Bmc Genomics, 12, p. 387. ISSN 1471-2164.
Identifiant IRD : fdi:010053785 -
Couvreur Thomas, Forest F., Baker W. J. (2011). Origin and global diversification patterns of tropical rain forests: inferences from a complete genus-level phylogeny of palms. Bmc Biology, 9, p. 44. ISSN 1741-7007.
Identifiant IRD : fdi:010053721 -
Couvreur Thomas, Porter-Morgan H., Wieringa J. J., Chatrou L. W. (2011). Little ecological divergence associated with speciation in two African rain forest tree genera. Bmc Evolutionary Biology, 11, p. 296. ISSN 1471-2148.
Identifiant IRD : fdi:010054087 -
De Mita Stéphane, Chantret N., Loridon K., Ronfort J., Bataillon T. (2011). Molecular adaptation in flowering and symbiotic recognition pathways : insights from patterns of polymorphism in the legume Medicago truncatula. Bmc Evolutionary Biology, 11, p. 229. ISSN 1471-2148.
Identifiant IRD : fdi:010053811 -
Diagne Nathalie, Escoute J., Lartaud M., Verdeil J. L., Franche Claudine, Kane A., Bogusz Didier, Diouf D., Duponnois Robin, Svistoonoff Sergio. (2011). Uvitex2B : a rapid and efficient stain for detection of arbuscular mycorrhizal fungi within plant roots. Mycorrhiza, 21 (4), p. 315-321. ISSN 0940-6360.
Identifiant IRD : fdi:010053494 -
Djedatin G., Ndjiondjop M. N., Mathieu Thierry, Cruz C. M. V., Sanni A., Ghesquière Alain, Verdier Valérie. (2011). Evaluation of African cultivated rice Oryza glaberrima for resistance to bacterial blight. Plant Disease, 95 (4), p. 441-447. ISSN 0191-2917.
Identifiant IRD : fdi:010052677 -
Eiserhardt W. L., Pintaud Jean-Christophe, Asmussen-Lange C., Hahn W. J., Bernal R., Balslev H., Borchsenius F. (2011). Phylogeny and divergence times of Bactridinae (Arecaceae, Palmae) based on plastid and nuclear DNA sequences. Taxon, 60 (2), p. 485-498. ISSN 0040-0262.
Identifiant IRD : fdi:010053490 -
Engelmann Florent. (2011). Use of biotechnologies for the conservation of plant biodiversity. In Vitro Cellular and Developmental Biology-Plant, 47 (1), p. 5-16. ISSN 1054-5476.
Identifiant IRD : fdi:010053557 -
Guyot Romain, Garavito Andrea, Gavory F., Samain S., Tohme J., Ghesquière Alain, Lorieux Mathias. (2011). Patterns of sequence divergence and evolution of the S-1 orthologous regions between Asian and African cultivated rice species. Plos One, 6 (3), p. e17726. ISSN 1932-6203.
Identifiant IRD : fdi:010053390 -
Hamon Perla, Duroy Pierre-Olivier, Dubreuil Tranchant Christine, Mafra D'Almeida Costa Paulo, Duret Caroline, Razafinarivo Norosoa, Couturon Emmanuel, Hamon Serge, Kochko Alexandre de, Poncet Valérie, Guyot Romain. (2011). Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae). Molecular Genetics and Genomics, 285 (6), p. 447-460. ISSN 1617-4615.
Identifiant IRD : fdi:010053575 -
Hocher Valérie, Alloisio N., Auguy Florence, Fournier P., Doumas Patrick, Pujic P., Gherbi Hassen, Queiroux C., Da Silva C., Wincker P., Normand P., Bogusz Didier. (2011). Transcriptomics of actinorhizal symbioses reveals homologs of the whole common symbiotic signaling cascade. Plant Physiology, 156 (2), p. 700-711. ISSN 0032-0889.
Identifiant IRD : fdi:010053586 -
Imanishi L., Vayssières Alice, Franche Claudine, Bogusz Didier, Wall L., Svistoonoff Sergio. (2011). Transformed hairy roots of Discaria trinervis : valuable tool for studying actinorhizal symbiosis in the context of intercellular infection. Molecular Plant-Microbe Interactions, 24 (11), p. 1317-1324. ISSN 0894-0282.
Identifiant IRD : fdi:010053905 -
Ito H., Gaubert H., Bucher E., Mirouze Marie, Vaillant I., Paszkowsi J. (2011). An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. Nature, 472 (7341), p. 115-119.
Identifiant IRD : fdi:010052504 -
Jouannic Stefan, Lartaud M., Herve J., Collin Myriam, Orieux Y., Verdeil J. L., Tregear James. (2011). The shoot apical meristem of oil palm (Elaeis guineensis ; Arecaceae) : developmental progression and dynamics. Annals of Botany, 108 (8 : Special Issue : Palm Biology), p. 1477-1487. ISSN 0305-7364.
Identifiant IRD : fdi:010054185 -
Lee Y. G., Popova E., Cui H. Y., Kim H. H., Park S. U., Bae C. H., Lee S. C., Engelmann Florent. (2011). Improved cryopreservation of chrysanthemum (Chrysanthemum morifolium) using droplet-vitrification. Cryoletters, 32 (6), p. 487-497. ISSN 0143-2044.
Identifiant IRD : fdi:010054286 -
Leroy T., De Bellis F., Legnate H., Kananura E., Gonzales G., Pereira L. F., Andrade A. C., Charmetant P., Montagnon C., Cubry P., Marraccini P., Pot D., Kochko Alexandre de. (2011). Improving the quality of African robustas : QTLs for yield- and quality-related traits in Coffea canephora. Tree Genetics and Genomes, 7 (4), p. 781-798. ISSN 1614-2942.
Identifiant IRD : fdi:010053795 -
Lucas Mikael, Laplaze Laurent, Bennett M. J. (2011). Plant systems biology : network matters. Plant Cell and Environment, 34 (4), p. 535-553. ISSN 0140-7791.
Identifiant IRD : fdi:010053388 -
Ludena B., Chabrillange Nathalie, Aberlenc Bertossi Frédérique, Adam Hélène, Tregear James, Pintaud Jean-Christophe. (2011). Phylogenetic utility of the nuclear genes AGAMOUS 1 and PHYTOCHROME B in palms (Arecaceae) : an example within Bactridinae. Annals of Botany, 108 (8 : Special Issue : Palm Biology), p. 1433-1444. ISSN 0305-7364.
Identifiant IRD : fdi:010054186 -
Mankessi F., Saya A. R., Favreau B., Doulbeau Sylvie, Conejero G., Lartaud M., Verdeil J. L., Monteuuis O. (2011). Variations of DNA methylation in Eucalyptus urophylla x Eucalyptus grandis shoot tips and apical meristems of different physiological ages. Physiologia Plantarum, 143 (2), p. 178-187. ISSN 0031-9317.
Identifiant IRD : fdi:010053847 -
Mariac Cédric, Jehin L., Saidou Abdoul-Aziz, Thuillet Anne-Céline, Couderc M., Sire P., Jugde H., Adam Hélène, Bezançon Gilles, Pham Jean-Louis, Vigouroux Yves. (2011). Genetic basis of pearl millet adaptation along an environmental gradient investigated by a combination of genome scan and association mapping. Molecular Ecology, 20 (1), p. 80-91. ISSN 0962-1083.
Identifiant IRD : fdi:010053000 -
Mirouze Marie, Paszkowski J. (2011). Epigenetic contribution to stress adaptation in plants. Current Opinion in Plant Biology, 14 (3), p. 267-274. ISSN 1369-5266.
Identifiant IRD : fdi:010053678 -
Montero-Cortes M., Cordova I., Verdeil J.L., Hocher Valérie, Ake A.P., Sandoval A., Oropeza C., Saenz L. (2011). GA(3) induces expression of E2F-like genes and CDKA during in vitro germination of zygotic embryos of Cocos nucifera (L.). Plant Cell Tissue and Organ Culture, 107 (3), p. 461-470. ISSN 0167-6857.
Identifiant IRD : fdi:010054406 -
Montufar R., Anthelme Fabien, Pintaud Jean-Christophe, Balslev H. (2011). Disturbance and resilience in tropical American palm populations and communities. Botanical Review, 77 (4), p. 426-461. ISSN 0006-8101.
Identifiant IRD : fdi:010054305 -
Op den Camp R. H. M., De Mita Stéphane, Lillo A., Cao Q. Q., Limpens E., Bisseling T., Geurts R. (2011). A phylogenetic strategy based on a legume-specific whole genome duplication yields symbiotic cytokinin type-a response regulators. Plant Physiology, 157 (4), p. 2013-2022. ISSN 0032-0889.
Identifiant IRD : fdi:010054334 -
Osorio-Saenz A., Mascorro-Gallardo J. O., Valle-Sandoval M. D., Gonzalez-Arnao M. T., Engelmann Florent. (2011). Geneticallly enginereed trehalose accumulation improves cryopreservation tolerance of chrysanthemum (Dendranthema grandiflorum Kitam) shoot-tips. Cryoletters, 32 (6), p. 477-486. ISSN 0143-2044.
Identifiant IRD : fdi:010054287 -
Ozudogru E. A., Kirdok E., Kaya E., Capuana M., Benelli C., Engelmann Florent. (2011). Cryopreservation of redwood (Sequoia sempervirens (D. DON.) ENDL.) in vitro buds using vitrification-based techniques. Cryoletters, 32 (2), p. 99-110. ISSN 0143-2044.
Identifiant IRD : fdi:010053553 -
Ozudogru E. A., Kirdok E., Kaya E., Capuana M., De Carlo A., Engelmann Florent. (2011). Medium-term conservation of redwood (Sequoia sempervirens (D. Don.) Endl.) in vitro shoot cultures and encapsulated buds. Scientia Horticulturae, 127 (3), p. 431-435. ISSN 0304-4238.
Identifiant IRD : fdi:010053063 -
Pawlowski K., Bogusz Didier, Ribeiro A., Berry A. M. (2011). Progress on research on actinorhizal plants. Functional Plant Biology, 38 (8-9), p. 633-638. ISSN 1445-4408.
Identifiant IRD : fdi:010053764 -
Perrine Walker Francine, Gherbi Hassen, Imanishi Leandro, Hocher Valérie, Ghodhbane Gtari Faten, Lavenus Julien, Benabdoun Faiza Meriem, Nambiar-Veetil M., Svistoonoff Sergio, Laplaze Laurent. (2011). Symbiotic signaling in actinorhizal symbioses. Current Protein and Peptide Science, 12 (2), p. 156-164. ISSN 1389-2037.
Identifiant IRD : fdi:010053596 -
Pintaud Jean-Christophe, Stauffer F. W. (2011). A revision of the large-flowered group of Basselinia Vieill. sect. Taloua H. E. Moore & Uhl (Arecaceae). Candollea, 66 (1), p. 147-154. ISSN 0373-2967.
Identifiant IRD : fdi:010054535 -
Privat I., Bardil A., Gomez A.B., Severac D., Dantec C., Fuentes I., Mueller L., Joët Thierry, Pot D., Foucrier S., Dussert Stéphane, Leroy Thierry, Journot L., Kochko Alexandre de, Campa Claudine, Combes Marie-Christine, Lashermes Philippe, Bertrand Benoit. (2011). The 'PUCE CAFE' Project : the First 15K coffee microarray, a new tool for discovering candidate genes correlated to agronomic and quality traits. Bmc Genomics, 12, p. 5. ISSN 1471-2164.
Identifiant IRD : fdi:010053088 -
Ribas Alessandra, Dechamp E., Champion Antony, Bertrand B., Combes Marie-Christine, Verdeil J. L., Lapeyre F., Lashermes Philippe, Etienne H. (2011). Agrobacterium-mediated genetic transformation of Coffea arabica (L.) is greatly enhanced by using established embryogenic callus cultures. Bmc Plant Biology, 11, p. 92. ISSN 1471-2229.
Identifiant IRD : fdi:010053607 -
Sabot François, Picault N., El-Baidouri M., Llauro C., Chaparro C., Piegu B., Roulin A., Guiderdoni E., Delabastide M., McCombie R., Panaud O. (2011). Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data. Plant Journal, 66 (2), p. 241-246. ISSN 0960-7412.
Identifiant IRD : fdi:010053480 -
Sajini K. K., Karun A., Amarnath C. H., Engelmann Florent. (2011). Cryopreservation of coconut (Cocos nucifera L.) zygotic embryos by vitrification. Cryoletters, 32 (4), p. 317-328. ISSN 0143-2044.
Identifiant IRD : fdi:010053867 -
Scarcelli Nora, Barnaud Adeline, Eiserhardt W., Treier U. A., Seveno Marie, Anfray d' Amélie, Vigouroux Yves, Pintaud Jean-Christophe. (2011). A set of 100 chloroplast DNA primer pairs to study population genetics and phylogeny in monocotyledons. Plos One, 6 (5), p. e19954. ISSN 1932-6203.
Identifiant IRD : fdi:010053574 -
Scarcelli Nora, Tostain Serge, Vigouroux Yves, Luong V., Baco M. N., Agbangla C., Dainou O., Pham Jean-Louis. (2011). Genetic structure of farmer-managed varieties in clonally-propagated crops. Genetica, 139 (8), p. 1055-1064. ISSN 0016-6707.
Identifiant IRD : fdi:010053870 -
Singh Manjit, Goel Shalendra, Meeley R.B., Dantec C., Parrinello H., Michaud Caroline, Leblanc Olivier, Grimanelli Daniel. (2011). Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein. Plant Cell, 23 (2), p. 443-458. ISSN 1040-4651.
Identifiant IRD : fdi:010053418 -
Springate D. A., Scarcelli Nora, Rowntree J., Kover P. X. (2011). Correlated response in plasticity to selection for early flowering in Arabidopsis thaliana. Journal of Evolutionary Biology, 24 (10), p. 2280-2288. ISSN 1010-061X.
Identifiant IRD : fdi:010053853 -
Sutka M., Li G. W., Boudet J., Boursiac Y., Doumas Patrick, Maurel C. (2011). Natural variation of root hydraulics in Arabidopsis grown in normal and salt-stressed conditions. Plant Physiology, 155 (3), p. 1264-1276. ISSN 0032-0889.
Identifiant IRD : fdi:010053175 -
Taedoumg H., De Block P., Hamon Perla, Sonke B. (2011). Craterispermum parvifolium and C. robbrechtianum spp. nov. (Rubiaceae) from west central Africa. Nordic Journal of Botany, 29 (6), p. 700-707. ISSN 0107-055X.
Identifiant IRD : fdi:010055693 -
Tranbarger Timothy, Dussert Stéphane, Joët Thierry, Argout X., Summo M., Champion Antony, Cros D., Omore A., Nouy B., Morcillo Fabienne. (2011). Regulatory mechanisms underlying oil palm fruit mesocarp maturation, ripening, and functional specialization in lipid and carotenoid metabolism. Plant Physiology, 156 (2), p. 564-584. ISSN 0032-0889.
Identifiant IRD : fdi:010053583 -
Tregear James, Rival Alain, Pintaud Jean-Christophe. (2011). A family portrait : unravelling the complexities of palms : preface. Annals of Botany, 108 (8 : Special Issue : Palm Biology), p. 1387-1389. ISSN 0305-7364.
Identifiant IRD : fdi:010054181 -
Tungngoen K., Viboonjun U., Kongsawadworakul P., Katsuhara M., Julien J. L., Sakr S., Chrestin Hervé, Narangajavana J. (2011). Hormonal treatment of the bark of rubber trees (Hevea brasiliensis) increases latex yield through latex dilution in relation with the differential expression of two aquaporin genes. Journal of Plant Physiology, 168 (3), p. 253-262. ISSN 0176-1617.
Identifiant IRD : fdi:010053172 -
Vialette-Guiraud A. C. M., Adam Hélène, Finet C., Jasinski S., Jouannic Stefan, Scutt C. P. (2011). Insights from ANA-grade angiosperms into the early evolution of CUP-SHAPED COTYLEDON genes. Annals of Botany, 107 (9), p. 1511-1519. ISSN 0305-7364.
Identifiant IRD : fdi:010079651 -
Vigouroux Yves, Barnaud Adeline, Scarcelli Nora, Thuillet Anne-Céline. (2011). Biodiversity, evolution and adaptation of cultivated crops. Comptes Rendus Biologies, 334 (5-6), p. 450-457. ISSN 1631-0691.
Identifiant IRD : fdi:010053648 -
Vigouroux Yves, Mariac Cédric, De Mita Stéphane, Pham Jean-Louis, Gerard B., Kapran I., Sagnard F., Deu M., Chantereau J., Ali A., Ndjeunga J., Luong V., Thuillet Anne-Céline, Saidou A. A., Bezançon Gilles. (2011). Selection for earlier flowering crop associated with climatic variations in the Sahel. Plos One, 6 (5), p. e19563. ISSN 1932-6203.
Identifiant IRD : fdi:010053525 -
Vujovic T., Sylvestre Isabelle, Ruzic D., Engelmann Florent. (2011). Droplet-vitrification of apical shoot tips of Rubus fruticosus L. and Prunus cerasifera Ehrh. Scientia Horticulturae, 130 (1), p. 222-228. ISSN 0304-4238.
Identifiant IRD : fdi:010053839 -
Yu Q.Y., Guyot Romain, Kochko Alexandre de, Byers A., Navajas-Perez R., Langston B.J., Dubreuil Tranchant Christine, Paterson A.H., Poncet Valérie, Nagai C., Ming R. (2011). Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea). Plant Journal, 67 (2), p. 305-317. ISSN 0960-7412.
Identifiant IRD : fdi:010053685 -
Yu Yanhua, Streubel J., Balzergue S., Champion Antony, Boch J., Koebnik Ralf, Feng J. X., Verdier Valérie, Szurek Boris. (2011). Colonization of rice leaf blades by an African strain of Xanthomonas oryzae pv. oryzae depends on a new TAL effector that Induces the rice nodulin-3 os11N3 gene. Molecular Plant-Microbe Interactions, 24 (9), p. 1102-1113. ISSN 0894-0282.
Identifiant IRD : fdi:010053778 -
Zarei A., Körbes A.P., Younessi P., Montiel G., Champion Antony, Memelink J. (2011). Two GCC boxes and AP2/ERF-domain transcription factor ORA59 in jasmonate/ethylene-mediated activation of the PDF1.2 promoter in Arabidopsis. Plant Molecular Biology, 75 (4-5), p. 321-331. ISSN 0167-4412.
Identifiant IRD : fdi:010060017
Articles
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Borges Garcia M., Destrade Batista R., Meneses Rodriguez S., Gomez Kosky R., Malaurie Bernard, Hamon Perla, Demenorval L.C. (2011). Optimizacion de un medio de cultivo para plantas micropropagadas de Dioscorea alata L.. Revista Colombiana de Biotecnología, 13 (2), p. 221-228. ISSN 1909-8758.
Identifiant IRD : fdi:010056098 -
Couvreur Thomas, Pirie M.D., Chatrou L.W., Saunders R.M.K., Su Y.C.F., Richardson J.E., Erkens R.H.J. (2011). Early evolutionary history of the flowering plant family Annonaceae : steady diversification and boreotropical geodispersal. Journal of Biogeography, 38, p. 664-680. ISSN 1365-2699.
Identifiant IRD : fdi:010053924 -
Dubreuil Tranchant Christine, Guyot Romain, Guellim Amira, Duret Caroline, Mare Marion de la, Razafinarivo Norosoa, Poncet Valérie, Hamon Serge, Hamon Perla, Kochko Alexandre de. (2011). Site-specific insertion polymorphism of the MITE Alex-1 in the genus Coffea suggests interspecific gene flow. International Journal of Evolutionnary Biology, 2011 (ID 358412), 9 p.
Identifiant IRD : fdi:010052679 -
Kahn Francis, Millan B., Pintaud Jean-Christophe, Machahua M. (2011). Detailed assessment of the distribution of Astrocaryum sect. Huicungo (Arecaceae) in Peru. Revista Peruana de Biologia, 18 (3), p. 279-282. ISSN 1561-0837.
Identifiant IRD : fdi:010054775
Directions d'ouvrages ou de revues
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Dessauw D. (ed.), Felmann P. (ed.), Granier L. (ed.), Cottin R., Louafi S., Verrier E., Adam-Blondon A.F., Andrivon D., Casaregola S., Lefèvre F., Ranjard L., Trometter M., Silvain Jean-François, Aubertin Catherine, Pham Jean-Louis. (2011). Lignes directrices pour l'accès aux ressources génétiques et leur transfert.
Paris : CIRAD, 59 p.
Identifiant IRD : fdi:010054902 -
Grapin A. (ed.), Keller E.R.J. (ed.), Lynch P.T. (ed.), Panis B., Revilla Bahillo A. (ed.), Engelmann Florent (ed.). (2011). Cryopreservation of crop species in Europe : COST Action 871 : CryoPlanet : proceedings of the final meeting.
Bruxelles ; Luxembourg : COST Office ; European Union, 8 p. + 243 p. COST Action 871 : CryoPlanet : Cryopreservation of Crop Species in Europe : Final Meeting, Angers (FRA), 2011/02/08-11. ISBN 978-92-898-0051-8.
Identifiant IRD : fdi:010056851 -
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). (2011). Improving smallholder livelihoods through improved Casuarina productivity : proceedings of the 4th international casuarina workshop.
Pékin : China Forestry Publishing House, 264 p. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054628
Chapitres ou parties d'ouvrages
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Barraco G., Sylvestre Isabelle, Engelmann Florent. (2011). Cryopreservation of sugarcane (Saccharum sp.) shoot tips using encapsulation-dehydration and droplet-vitrification. In :
Grapin A. (ed.), Keller E.R.J. (ed.), Lynch P.T. (ed.), Panis B., Revilla Bahillo A. (ed.), Engelmann Florent (ed.). Cryopreservation of crop species in Europe : COST Action 871 : CryoPlanet : proceedings of the final meeting. Bruxelles ; Luxembourg : COST Office ; European Union, p. 119-122. COST Action 871 : CryoPlanet : Cryopreservation of Crop Species in Europe : Final Meeting, Angers (FRA), 2011/02/08-11. ISBN 978-92-898-0051-8.
Identifiant IRD : fdi:010056852 -
Diagne Nathalie, Svistoonoff Sergio, Franche Claudine, Kane A., Bogusz Didier, Diouf D., Duponnois Robin. (2011). Characterization of endomycorrhizal strains from Casuarina equisetifolia to be used for reforestation and rehabilitation of degraded ecosystems in Senegal. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 137-143. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054632 -
Engelmann Florent. (2011). Cryopreservation of embryos : an overview. In :
Thorphe T.A. (ed.), Yeung E.C. (ed.). Plant embryo culture : methods and protocols. Dordrecht : Springer, 710, p. 155-184. (Methods in Molecular Biology). ISBN 978-1-61737-987-1. ISSN 1064-3745.
Identifiant IRD : fdi:010054521 -
Engelmann Florent, Balsemin E., Barreneche T., Chatelet P., Chauvin J.E., Couturon Emmanuel, Curk F., Dantec M.A., Dantec J.P., Decourcelles T., Dussert Stéphane, Feugey L., Froelicher Y., Fouilhaux L., Gamiette F., Grapin A., Grisoni M., Guérif P., Guyader A., Label A., Luro F., Moulin B., Muller M., Peyrière A., Prigent Y., Renard M., Roux-Cuvelier M., Roques D., Rubens S., Sapotille J., Souchet C., Sylvestre Isabelle, Teyssedre D. (2011). Integration of cryoconservation in french plant genetic resource collections : the CRYOVEG project. In :
Grapin A. (ed.), Keller E.R.J. (ed.), Lynch P.T. (ed.), Panis B., Revilla Bahillo A. (ed.), Engelmann Florent (ed.). Cryopreservation of crop species in Europe : COST Action 871 : CryoPlanet : proceedings of the final meeting. Bruxelles ; Luxembourg : COST Office ; European Union, p. 129-131. COST Action 871 : CryoPlanet : Cryopreservation of Crop Species in Europe : Final Meeting, Angers (FRA), 2011/02/08-11. ISBN 978-92-898-0051-8.
Identifiant IRD : fdi:010056853 -
Engelmann Florent, Malaurie Bernard, N'Nan O. (2011). In vitro culture of coconut (Cocos nucifera L.) zygotic embryos. In :
Thorphe T.A. (ed.), Yeung E.C. (ed.). Plant embryo culture : methods and protocols. Dordrecht : Springer Science + Business Media, 710, p. 63-72. (Methods in Molecular Biology). ISBN 978-1-61737-987-1. ISSN 1064-3745.
Identifiant IRD : fdi:010054520 -
Franche Claudine. (2011). Les OGM sont-ils une solution pour nourrir la planète ? (+ annexe 1. Etapes nécessaires à l'obtention d'une plante transgénique). In :
Guizard P. (ed.), Coudrain Anne (collab.), Tapiau Muriel (collab.). Les développements durables. Montpellier : CRDP, p. 48-51 + p. 190-191. (Questions Ouvertes). ISBN 978-2-86626-409-3. ISSN 1969-5543.
Identifiant IRD : fdi:010052206 -
Gherbi Hassen, Diagne Nathalie, Duponnois Robin, Bogusz Didier, Franche Claudine, Bekki A. (2011). Casuarinaceae for soil rehabilitation in Algeria. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 249. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054637 -
Graça I., Santos Patricia, Liang J., Melo A., Fortunato Ana, Palos I., Bogusz Didier, Svistoonoff Sergio, Hocher Valérie, Ribeiro A., Franche Claudine. (2011). Role of defense related genes in the early stages of the actinorhizal symbiosis. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 248. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054636 -
Guyader A., Guisnel R., Simmoneau F., Rocand B., Le Bras C., Grapin A., Chatelet P., Dussert Stéphane, Engelmann Florent, Feugey L., Engelmann Florent. (2011). First results on cryopreservation by dormant bud technique of a set of Malus and Pyrus cultivars from the INRA biological resources centre. In :
Grapin A. (ed.), Keller E.R.J. (ed.), Lynch P.T. (ed.), Panis B., Revilla Bahillo A. (ed.), Engelmann Florent (ed.). Cryopreservation of crop species in Europe : COST Action 871 : CryoPlanet : proceedings of the final meeting. Bruxelles ; Luxembourg : COST Office ; European Union, p. 141-144. COST Action 871 : CryoPlanet : Cryopreservation of Crop Species in Europe : Final Meeting, Angers (FRA), 2011/02/08-11. ISBN 978-92-898-0051-8.
Identifiant IRD : fdi:010056854 -
Hocher Valérie, Svistoonoff Sergio, Gherbi Hassen, Laplaze Laurent, Meriem Benabdoun Faiza, Diagne Nathalie, Abdel-Lateif Khalid, Franche Claudine, Bogusz Didier. (2011). Molecular basis of Casuarina Frankia symbiosis. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 108-111. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054630 -
Huang G., Zhong C., Su X., Zhang Y., Pinyopusarerk K., Franche Claudine, Bogusz Didier. (2011). Genetic diversity of Casuarina equisetifolia provenances. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 152-157. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054634 -
Jiang Q., Zhong C., Nambiar-Veetil M., Svistoonoff Sergio, Gherbi Hassen, Hocher Valérie, Bonneau Jocelyne, Moukouanga Daniel, Bogusz Didier, Franche Claudine. (2011). Genetic transformation of Casuarinaceae trees. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 112-115. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054631 -
Markovic Z., Chatelet P., Sylvestre Isabelle, Karoglan Kontic J., Engelmann Florent. (2011). Duration of culture of grapevine (Vitis vinifera) microcuttings on medium with zeating riboside affects shoot tip recovery after cryopreservation. In :
Grapin A. (ed.), Keller E.R.J. (ed.), Lynch P.T. (ed.), Panis B., Revilla Bahillo A. (ed.), Engelmann Florent (ed.). Cryopreservation of crop species in Europe : COST Action 871 : CryoPlanet : proceedings of the final meeting. Bruxelles ; Luxembourg : COST Office ; European Union, p. 145-147. COST Action 871 : CryoPlanet : Cryopreservation of Crop Species in Europe : Final Meeting, Angers (FRA), 2011/02/08-11. ISBN 978-92-898-0051-8.
Identifiant IRD : fdi:010056855 -
Nambiar-Veetil M., Narayanan Nair D., Kamalabai Selvakesavan R., Jayaraj R.S.C., Roopesh M., Prabhu S.J., Balasubramanian A., Ventkatachalam R., Sowmiyarani K.S., Sudha S., Bachpai V.W., Franche Claudine, Gherbi Hassen, Svistoonoff Sergio, Hocher Valérie, Bogusz Didier, Vivekanandan R. (2011). Development of an in silico gene bank for plant abiotic stresses : towards its utilization for molecular analysis of salt tolerant and susceptible Casuarina equisetifolia clones. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 144-151. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054633 -
Poncet Valérie, Plechakova O., Benedet F., Guyot R., Couderc M., Block P. de, Hamon P., Campa Claudine, Kochko Alexandre de, Hamon Serge, Tranchant-Dubreuil C.. (2011). MOCCADB : an integrative database for funtional comparative and diversity studies in the rubiaceae family. In :
Actes du 23ème colloque scientifique international sur le café. Bussigny : ASIC, p. 389-396. Colloque Scientifique International sur le Café, 23., Bali (IND), 2010/10/03-08. ISBN 978-2-900212-22-6.
Identifiant IRD : fdi:010051895 -
Robert T., Khalfallah N., Martel E., Lamy F., Poncet Valérie, Allinne C., Remigereau M.S., Rekima S., Leveugle M., Lakis G., Siljak-Yakovlev S., Sarr A. (2011). Pennisetum. In :
Kole C. (ed.). Wild crop relatives : genomic and breeding resources, millets and grasses. Berlin : Springer, p. 217-255. ISBN 978-3-642-14255-0-13.
Identifiant IRD : fdi:010051477 -
Svistoonoff Sergio, Imanishi L., Moukouanga Daniel, Bonneau Jocelyne, Vaissayre Virginie, Bogusz Didier, Wall L., Franche Claudine. (2011). Comparative analysis of the infection process in Casuarina glauca and Discaria trivernis. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 250-251. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054638 -
Sy M.O., Franche Claudine. (2011). L'apport des biotechnologies végétales aux pays en développement. In :
Ricroch A. (dir.), Dattée Y. (dir.), Fellous M. (dir.), Kahn A. (préf.). Biotechnologies végétales : environnement, alimentation, santé. Paris : Vuibert, p. 185-197.
Identifiant IRD : fdi:010052692 -
Vujovic T., Sylvestre Isabelle, Ruzic D., Engelmann Florent. (2011). Cryopreservation of cherry plum and blackberry shoot tips by droplet-vitrification. In :
Grapin A. (ed.), Keller E.R.J. (ed.), Lynch P.T. (ed.), Panis B., Revilla Bahillo A. (ed.), Engelmann Florent (ed.). Cryopreservation of crop species in Europe : COST Action 871 : CryoPlanet : proceedings of the final meeting. Bruxelles ; Luxembourg : COST Office ; European Union, p. 163-165. COST Action 871 : CryoPlanet : Cryopreservation of Crop Species in Europe : Final Meeting, Angers (FRA), 2011/02/08-11. ISBN 978-92-898-0051-8.
Identifiant IRD : fdi:010056856 -
Zhong C., Jiang Q., Zhang Y., Nambiar-Veetil M., Vaissayre Virginie, Bogusz Didier, Franche Claudine. (2011). Genetic transformation of Casuarina equisetifolia by Agrobacterium tumefaciens. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 163-169. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054635 -
Zhong C., Zhang Y., Chen Y., Jiang Q., Chen Z., Wu C., Pinyopusarerk K., Franche Claudine, Bogusz Didier. (2011). Casuarina research and development in China. In :
Zhong C. (ed.), Pinyopusarerk K. (ed.), Kalinganire A. (ed.), Franche Claudine (ed.). Improving smallholder livelihoods through improved casuarina productivity : proceedings of the 4th international casuarina workshop. Pékin : China Forestry Publishing House, p. 5-10. International Casuarina Workshop, 4., Haikou (CHN), 2010/03/21-25. ISBN 978-7-5038-6365-3.
Identifiant IRD : fdi:010054629
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