Publications des scientifiques de l'IRD

Scarcelli Nora, Garcia Davila C., Couderc Marie, Castro Ruiz D., Estivals G., Custodio Angulo Chavez C.A., Acho Vasquez H., Alvarado Reategui J.G., Vizcarra Bentos T., Mariac Cédric. (2024). The complete chloroplast genome of Marupa (Simarouba amara Aubl., Simaroubaceae). Ecology and Evolution, 14 (7), e11688 [7 p.]. ISSN 2045-7758.

Titre du document
The complete chloroplast genome of Marupa (Simarouba amara Aubl., Simaroubaceae)
Année de publication
2024
Type de document
Article référencé dans le Web of Science WOS:001266168200001
Auteurs
Scarcelli Nora, Garcia Davila C., Couderc Marie, Castro Ruiz D., Estivals G., Custodio Angulo Chavez C.A., Acho Vasquez H., Alvarado Reategui J.G., Vizcarra Bentos T., Mariac Cédric
Source
Ecology and Evolution, 2024, 14 (7), e11688 [7 p.] ISSN 2045-7758
Marupa (Simarouba amara Aublet 1775) is a tropical tree of the family Simaroubaceae. It is commonly used for its wood in the Amazonian forest, and it is an important species for restoring degraded environments. Yet, very little genetic resources are available to study this plant. In this paper, we sequenced for the first time the complete chloroplast genome of Marupa, using Oxford Nanopore long-read technology. The genome is 159,838?bp, includes 131 genes in total and presents a classic quadripartite structure. Its length and structure are similar to those of sister species of the Simaroubaceae family. A maximum likelihood phylogeny of the order Sapindale reveals that Simarouba amara is well positioned in its family. This complete plastome is a first step towards a better analysis of Marupa future evolution.
Plan de classement
Sciences fondamentales / Techniques d'analyse et de recherche [020] ; Sciences du monde végétal [076]
Localisation
Fonds IRD [F B010091484]
Identifiant IRD
fdi:010091484
Contact