Gardette A., Sklab Youcef, Belda Eugeni, Chenin Eric, Zucker Jean-Daniel. (2024). METAPLANTCODE : harmonizing plant metabarcoding pipelines in Europe. Biodiversity Information Science and Standards, 8, e135729 [5 p.]. ISSN 2535-0897.
Titre du document
METAPLANTCODE : harmonizing plant metabarcoding pipelines in Europe
Année de publication
2024
Type de document
Article
Auteurs
Gardette A., Sklab Youcef, Belda Eugeni, Chenin Eric, Zucker Jean-Daniel
Source
Biodiversity Information Science and Standards, 2024,
8, e135729 [5 p.] ISSN 2535-0897
The METAPLANTCODE project is dedicated to advancing and optimizing pan-European
case studies on metabarcoding. The project's objectives include providing best practice
recommendations, optimizing analysis pipelines for species identification, and creating
user-friendly reference databases. To accomplish these objectives, METAPLANTCODE
will identify and address gaps in current methodologies, publish best practice documents
on FAIR (Findable, Accessible, Interoperable, Reusable) data publishing for plant
metabarcode data to GBIF (Global Biodiversity Information Facility) and the INSDC
(International Nucleotide Sequence Database Collaboration), and implement ELIXIR-
compatible multimodal deep learning (DL) models in novel tools for standalone
metabarcoding analyses using various data sources.
Plan de classement
Sciences du milieu [021]
;
Sciences du monde végétal [076]
;
Informatique [122]
