@article{fdi:010095715, title = {{METAPLANTCODE} : harmonizing plant metabarcoding pipelines in {E}urope}, author = {{G}ardette, {A}. and {S}klab, {Y}oucef and {B}elda, {E}ugeni and {C}henin, {E}ric and {Z}ucker, {J}ean-{D}aniel}, editor = {}, language = {{ENG}}, abstract = {{T}he {METAPLANTCODE} project is dedicated to advancing and optimizing pan-{E}uropean case studies on metabarcoding. {T}he project's objectives include providing best practice recommendations, optimizing analysis pipelines for species identification, and creating user-friendly reference databases. {T}o accomplish these objectives, {METAPLANTCODE} will identify and address gaps in current methodologies, publish best practice documents on {FAIR} ({F}indable, {A}ccessible, {I}nteroperable, {R}eusable) data publishing for plant metabarcode data to {GBIF} ({G}lobal {B}iodiversity {I}nformation {F}acility) and the {INSDC} ({I}nternational {N}ucleotide {S}equence {D}atabase {C}ollaboration), and implement {ELIXIR}- compatible multimodal deep learning ({DL}) models in novel tools for standalone metabarcoding analyses using various data sources.}, keywords = {}, booktitle = {}, journal = {{B}iodiversity {I}nformation {S}cience and {S}tandards}, volume = {8}, numero = {}, pages = {e135729 [5 ]}, ISSN = {2535-0897}, year = {2024}, DOI = {10.3897/biss.8.135729}, URL = {https://www.documentation.ird.fr/hor/fdi:010095715}, }