Publications des scientifiques de l'IRD

dos Reis M. C., Romac S., Le Gall F., Marie D., Frada M. J., Koplovitz G., Cariou Thierry, Henry N., de Vargas C., Jeanthon C. (2023). Exploring the phycosphere of Emiliania huxleyi : from bloom dynamics to microbiome assembly experiments. Molecular Ecology, [Early access], p. [16 p.]. ISSN 0962-1083.

Titre du document
Exploring the phycosphere of Emiliania huxleyi : from bloom dynamics to microbiome assembly experiments
Année de publication
2023
Type de document
Article référencé dans le Web of Science WOS:000916084400001
Auteurs
dos Reis M. C., Romac S., Le Gall F., Marie D., Frada M. J., Koplovitz G., Cariou Thierry, Henry N., de Vargas C., Jeanthon C.
Source
Molecular Ecology, 2023, [Early access], p. [16 p.] ISSN 0962-1083
Coccolithophores have global ecological and biogeochemical significance as the most important calcifying marine phytoplankton group. The structure and selection of prokaryotic communities associated with the most abundant coccolithophore and bloom-forming species, Emiliania huxleyi, are still poorly known. In this study, we assessed the diversity of bacterial communities associated with an E. huxleyi bloom in the Celtic Sea (Eastern North Atlantic), exposed axenic E. huxleyi cultures to prokaryotic communities derived from bloom and non-bloom conditions, and followed the dynamics of their microbiome composition over one year. Bloom-associated prokaryotic communities were dominated by SAR11, Marine group II Euryarchaeota and Rhodobacterales and contained substantial proportions of known indicators of phytoplankton bloom demises such as Flavobacteriaceae and Pseudoalteromonadaceae. The taxonomic richness of bacteria derived from natural communities associated with axenic E. huxleyi rapidly shifted and then stabilized over time. The succession of microorganisms recruited from the environment was consistently dependent on the composition of the initial bacterioplankton community. Phycosphere-associated communities derived from the E. huxleyi bloom were highly similar to one another, suggesting deterministic processes, whereas cultures from non-bloom conditions show an effect of stochasticity. Overall, this work sheds new light on the importance of the initial inoculum composition in microbiome recruitment and elucidates the temporal dynamics of its composition and long-term stability.
Plan de classement
Sciences fondamentales / Techniques d'analyse et de recherche [020] ; Limnologie biologique / Océanographie biologique [034]
Description Géographique
ATLANTIQUE ; CELTIQUE MER
Localisation
Fonds IRD [F B010086927]
Identifiant IRD
fdi:010086927
Contact