Publications des scientifiques de l'IRD

Cohen S. P., Luna E. K., Lang J. M., Ziegle J., Chang C., Leach J. E., Le-Saux M. F., Portier P., Koebnik Ralf, Jacobs J. M. (2020). High-quality genome resource of Xanthomonas hyacinthi generated via long-read sequencing. Plant Disease, 104 (4), p. 1011-1012. ISSN 0191-2917.

Titre du document
High-quality genome resource of Xanthomonas hyacinthi generated via long-read sequencing
Année de publication
2020
Type de document
Article référencé dans le Web of Science WOS:000569158900002
Auteurs
Cohen S. P., Luna E. K., Lang J. M., Ziegle J., Chang C., Leach J. E., Le-Saux M. F., Portier P., Koebnik Ralf, Jacobs J. M.
Source
Plant Disease, 2020, 104 (4), p. 1011-1012 ISSN 0191-2917
The bacterial plant pathogen Xanthomonas hyacinthi is the causal agent of yellow disease of Hyacinthus and other ornamental plant genera. There is no available complete genome for X. hyacinthi, limiting basic research for this pathogen. Here, we release a high-quality complete genome sequence for the X. hyacinthi type strain, CFBP 1156. Single-molecule real-time (SMRT) sequencing with a mean coverage of 306x revealed two contigs of 4,918,645 and 44,381 bp in size. This was the first characterized plant-disease-causing species of Xanthomonas and this genome provides a resource to better understand the biology of yellow disease of hyacinth.
Plan de classement
Sciences fondamentales / Techniques d'analyse et de recherche [020] ; Sciences du monde végétal [076]
Localisation
Fonds IRD [F B010079720]
Identifiant IRD
fdi:010079720
Contact