Keita M. B., Padhmanabhan R., Robert C., Delaporte Eric, Raoult Didier, Fournier P. E., Bittar F. (2016). Non-contiguous-finished genome sequence and description of Paenibacillus camerounensis sp. nov.. Microbial Ecology, 71 (4), p. 990-998. ISSN 0095-3628.
Titre du document
Non-contiguous-finished genome sequence and description of Paenibacillus camerounensis sp. nov.
Keita M. B., Padhmanabhan R., Robert C., Delaporte Eric, Raoult Didier, Fournier P. E., Bittar F.
Source
Microbial Ecology, 2016,
71 (4), p. 990-998 ISSN 0095-3628
Strain G4(T) was isolated from the stool sample of a wild gorilla (Gorilla gorilla gorilla) from Cameroon. It is a facultative anaerobic, Gram-negative, rod-shaped bacterium. This strain exhibits a 16S rRNA nucleotide sequence similarity of 97.48 % with Paenibacillus typhae, the phylogenetically closest species with standing nomenclature. Moreover, the strain G4(T) presents some phenotypic differences when compared to other Paenibacillus species and shows a low MALDI-TOF Mass Spectrometry score that does not allow any identification. Thus, it is likely that this strain represents a new species. Here, we describe the characteristics of this organism, complete genome sequence, and annotation. The 6,933,847 bp size genome (1 chromosome but no plasmid) contains 5972 protein-coding genes and 54 RNAs genes, including 44 tRNA genes. In addition, digital DNA-DNA hybridization values for the genome of the strain G4(T) against the closest Paenibacillus genomes range between 19.7 and 22.1, once again confirming its new status as a new species. On the basis of these polyphasic data, consisting of phenotypic and genomic analyses, we propose the creation of Paenibacillus camerounensis sp. nov. that contains the strain G4(T).
Plan de classement
Sciences fondamentales / Techniques d'analyse et de recherche [020]
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Entomologie médicale / Parasitologie / Virologie [052]
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Sciences du monde animal [080]
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Biotechnologies [084]
