2021

Articles référencés dans le Web of Science

1. Meunier V., Geissler L., Bonnet Sophie, Radecker N., Perna G., Grosso O., Lambert C., Rodolfo-Metalpa Riccardo, Voolstra C. R., Houlbrèque Fanny. (2021). Microbes support enhanced nitrogen requirements of coral holobionts in a high CO2 environment. Molecular Ecology, 30 (22), 5888-5899. ISSN 0962-1083.
   Identifiant IRD :  fdi:010083213
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2. Meunier V., Bonnet Sophie, Benavides Mar, Ravache A., Grosso O., Lambert C., Houlbrèque Fanny. (2021). Diazotroph-derived nitrogen assimilation strategies differ by scleractinian coral species. Frontiers in Marine Science, 8, 692248 [11 p.].
   Identifiant IRD :  fdi:010082655
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2020

Articles référencés dans le Web of Science

1. Benavides Mar, Duhamel S., Van Wambeke F., Shoemaker K. M., Moisander P. H., Salamon E., Riemann L., Bonnet Sophie. (2020). Dissolved organic matter stimulates N-2 fixation and nifH gene expression in Trichodesmium. FEMS Microbiology Letters, 367 (4), p. art. fnaa034. ISSN 0378-1097.
   Identifiant IRD :  PAR00021146
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2. Messie M., Petrenko A., Doglioli A. M., Aldebert C., Martinez Elodie, Koenig G., Bonnet Sophie, Moutin T. (2020). The delayed island mass effect : how islands can remotely trigger blooms in the oligotrophic ocean. Geophysical Research Letters, 47 (2), p. e2019GL085282 [10 p.]. ISSN 0094-8276.
   Identifiant IRD :  fdi:010077955
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3. Saulia Emmrick, Benavides Mar, Henke B., Turk-Kubo K., Cooperguard H., Grosso O., Desnues Anne, Rodier Martine, Dupouy Cécile, Riemann L., Bonnet Sophie. (2020). Seasonal shifts in Diazotrophs players: patterns observed over a two-year time series in the New Caledonian lagoon (Western tropical South Pacific ocean). Frontiers in Marine Science, 7, 581755 [11 p.]. ISSN 2296-7745.
   Identifiant IRD :  fdi:010080067
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2019

Articles référencés dans le Web of Science

1. Lu Y. Y., Wen Z. Z., Shi D. L., Lin W. F., Bonnet Sophie, Dai M. H., Kao S. J. (2019). Biogeography of N-2 fixation influenced by the western boundary current intrusion in the South China Sea. Journal of Geophysical Research : Oceans, 124 (10), p. 6983-6996. ISSN 2169-9275.
   Identifiant IRD :  fdi:010077125
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2. Meunier V., Bonnet Sophie, Pernice M., Benavides Mar, Lorrain Anne, Grosso O., Christophe L., Houlbrèque Fanny. (2019). Bleaching forces coral's heterotrophy on diazotrophs and Synechococcus. ISME Journal, 13 (11), p. 2882-2886. ISSN 1751-7362.
   Identifiant IRD :  fdi:010077088
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2018

Articles référencés dans le Web of Science

1. Benavides Mar, Bonnet Sophie, Berman-Frank I., Riemann L. (2018). Deep into oceanic N-2 fixation. Frontiers in Marine Science, 5, p. art. 108 [4 p.].
   Identifiant IRD :  fdi:010074937
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2. Benavides Mar, Martias C., Elifantz H., Berman-Frank I., Dupouy Cécile, Bonnet Sophie. (2018). Dissolved organic matter influences N-2 fixation in the New Caledonian lagoon (Western Tropical South Pacific). Frontiers in Marine Science, 5, 89 [11 p.].
   Identifiant IRD :  fdi:010074938
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3. Duhamel S., Van Wambeke F., Lefevre D., Benavides Mar, Bonnet Sophie. (2018). Mixotrophic metabolism by natural communities of unicellular cyanobacteria in the western tropical South Pacific Ocean. Environmental Microbiology, 20 (8), p. 2743-2756. ISSN 1462-2912.
   Identifiant IRD :  fdi:010074056
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4. Rousset G., De Boissieu F., Menkès Christophe, Lefevre Jérôme, Frouin R., Rodier Martine, Ridoux V., Laran S., Bonnet Sophie, Dupouy Cécile. (2018). Remote sensing of Trichodesmium spp. mats in the western tropical South Pacific. Biogeosciences, 15 (16), p. 5203-5219. ISSN 1726-4170.
   Identifiant IRD :  fdi:010073963
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5. Dutheil C., Aumont Olivier, Gorgues Thomas, Lorrain Anne, Bonnet Sophie, Rodier Martine, Dupouy Cécile, Shiozaki T., Menkès Christophe. (2018). Modelling N-2 fixation related to Trichodesmium sp. : driving processes and impacts on primary production in the tropical Pacific Ocean. Biogeosciences, 15 (14), p. 4333-4352. ISSN 1726-4170.
   Identifiant IRD :  fdi:010073657
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6. Spungin D., Belkin N., Foster R. A., Stenegren M., Caputo A., Pujo-Pay M., Leblond N., Dupouy Cécile, Bonnet Sophie, Berman-Frank I. (2018). Programmed cell death in diazotrophs and the fate of organic matter in the western tropical South Pacific Ocean during the OUTPACE cruise. Biogeosciences, 15 (12), p. 3893-3908. ISSN 1726-4170.
   Identifiant IRD :  fdi:010073183
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7. Guieu C., Bonnet Sophie, Petrenko A., Menkès Christophe, Chavagnac V., Desboeufs K., Maes Christophe, Moutin T. (2018). Iron from a submarine source impacts the productive layer of the Western Tropical South Pacific (WTSP). Scientific Reports - Nature, 8, p. art. 9075 [9 p.]. ISSN 2045-2322.
   Identifiant IRD :  fdi:010073162
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8. Caffin M., Berthelot H., Cornet-Barthaux V., Barani A., Bonnet Sophie. (2018). Transfer of diazotroph-derived nitrogen to the planktonic food web across gradients of N-2 fixation activity and diversity in the western tropical South Pacific Ocean. Biogeosciences, 15 (12), p. 3795-3810. ISSN 1726-4170.
   Identifiant IRD :  fdi:010073167
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9. Bonnet Sophie, Caffin M., Berthelot H., Grosso O., Benavides Mar, Helias-Nunige S., Guieu C., Stenegren M., Foster R. A. (2018). In-depth characterization of diazotroph activity across the western tropical South Pacific hotspot of N-2 fixation (OUTPACE cruise). Biogeosciences, 15 (13), p. 4215-4232. ISSN 1726-4170.
   Identifiant IRD :  fdi:010073224
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10. Benavides M., Shoemaker K. M., Moisander P. H., Niggemann J., Dittmar T., Duhamel S., Grosso O., Pujo-Pay M., Helias-Nunige S., Fumenia A., Bonnet Sophie. (2018). Aphotic N-2 fixation along an oligotrophic to ultraoligotrophic transect in the western tropical South Pacific Ocean. Biogeosciences, 15 (9), p. 3107-3119. ISSN 1726-4170.
    Identifiant IRD :  fdi:010073043
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11. Knapp A. N., McCabe K. M., Grosso O., Leblond N., Moutin T., Bonnet Sophie. (2018). Distribution and rates of nitrogen fixation in the western tropical South Pacific Ocean constrained by nitrogen isotope budgets. Biogeosciences, 15 (9), p. 2619-2628. ISSN 1726-4170.
    Identifiant IRD :  fdi:010072839
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12. Caffin M., Moutin T., Foster R. A., Bouruet-Aubertot P., Doglioli A. M., Berthelot H., Guieu C., Grosso O., Helias-Nunige S., Leblond N., Gimenez A., Petrenko A. A., de Verneil A., Bonnet Sophie. (2018). N-2 fixation as a dominant new N source in the western tropical South Pacific Ocean (OUTPACE cruise). Biogeosciences, 15 (8), p. 2565-2585. ISSN 1726-4170.
    Identifiant IRD :  fdi:010072818
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13. Stenegren M., Caputo A., Berg C., Bonnet Sophie, Foster R. A. (2018). Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific. Biogeosciences, 15 (5), p. 1559-1578. ISSN 1726-4170.
    Identifiant IRD :  fdi:010072470
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14. Henke B. A., Turk-Kubo K. A., Bonnet Sophie, Zehr J. P. (2018). Distributions and abundances of sublineages of the N-2-fixing cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the New Caledonian coral lagoon. Frontiers in Microbiology, 9, art. 554 [14 p.]. ISSN 1664-302X.
    Identifiant IRD :  fdi:010072713
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15. Lu Y. Y., Wen Z. Z., Shi D. L., Chen M. M., Zhang Y., Bonnet Sophie, Li Y. H., Tian J. W., Kao S. J. (2018). Effect of light on N-2 fixation and net nitrogen release of Trichodesmium in a field study. Biogeosciences, 15 (1), p. 1-12. ISSN 1726-4170.
    Identifiant IRD :  fdi:010071969
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Chapitres ou parties d'ouvrages

1. Meunier V., Bonnet Sophie, Lorrain Anne, Benavides M., Camps M., Grosso O., Houlbrèque Fanny. (2018). Les récifs en quête de diazotrophes. In : Payri Claude (ed.), Moatti Jean-Paul (pref.). Nouvelle-Calédonie : archipel de corail. Marseille ; Nouméa : IRD ; Solaris, p. 63-66. ISBN 978-2-7099-2632-4.
   Identifiant IRD :  fdi:010073407
    Open Access


2. Bonnet Sophie, Fichez Renaud, Dupouy Cécile, Rodier Martine. (2018). Des eaux cristallines qui regorgent d'organismes microscopiques. In : Payri Claude (ed.), Moatti Jean-Paul (pref.). Nouvelle-Calédonie : archipel de corail. Marseille ; Nouméa : IRD ; Solaris, p. 67-70. ISBN 978-2-7099-2632-4.
   Identifiant IRD :  fdi:010073409
    Open Access


3. Meunier V., Bonnet Sophie, Lorrain Anne, Benavides M., Camps M., Grosso O., Houlbrèque Fanny. (2018). The reefs' quest for diazotrophs. In : Payri Claude (ed.), Mattio L. (trad.). New Caledonia : world of corals. Marseille ; Nouméa : IRD ; Solaris, p. 63-66. ISBN 978-2-7099-2677-5.
   Identifiant IRD :  fdi:010076374
    Open Access


4. Bonnet Sophie, Fichez Renaud, Dupouy Cécile, Rodier Martine. (2018). Crystal clear waters filled with microscopic organisms. In : Payri Claude (ed.), Mattio L. (trad.). New Caledonia : world of corals. Marseille ; Nouméa : IRD ; Solaris, p. 67-70. ISBN 978-2-7099-2677-5.
   Identifiant IRD :  fdi:010076376
    Open Access

2017

Articles

1. Ganachaud Alexandre, Cravatte Sophie, Sprintall J., Germineaud C., Alberty M., Jeandel C., Eldin Gérard, Metzl N., Bonnet Sophie, Benavides M., Heimburger L.E., Lefèvre Jérôme, Michael S., Resing J., Quéroué F., Sarthou G., Rodier Martine, Berthelot H., Baurand François, Grelet Jacques, Hasegawa T., Kessler W., Kilepak M., Lacan F., Privat E., Send U., Van Beek P., Souhaut M., Sonke J.E. (2017). The Solomon Sea : its circulation, chemistry, geochemistry and biology explored during two oceanographic cruises. Elementa : Science of the Anthropocene, 5, art. no 33 [27 p. en ligne]. ISSN 2325-1026.
   Identifiant IRD :  fdi:010071204
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Articles référencés dans le Web of Science

1. Berthelot H., Benavides M., Moisander P. H., Grosso O., Bonnet Sophie. (2017). High-nitrogen fixation rates in the particulate and dissolved pools in the Western Tropical Pacific (Solomon and Bismarck Seas). Geophysical Research Letters, 44 (16), 8414-8423. ISSN 0094-8276.
   Identifiant IRD :  fdi:010071022
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2. Moisander P. H., Benavides M., Bonnet Sophie, Berman-Frank I., White A. E., Riemann L. (2017). Chasing after non-cyanobacterial nitrogen fixation in marine pelagic environments. Frontiers in Microbiology, 8, p. art. 1736 [8 p.]. ISSN 1664-302X.
   Identifiant IRD :  fdi:010070991
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3. Moutin T., Doglioli A. M., de Verneil A., Bonnet Sophie. (2017). Preface : The oligotrophy to the UlTra-oligotrophy PACific Experiment (OUTPACE cruise, 18 February to 3 April 2015). Biogeosciences, 14 (13), p. 3207-3220. ISSN 1726-4170.
   Identifiant IRD :  fdi:010070325
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4. Houssard P., Lorrain Anne, Tremblay-Boyer L., Allain V., Graham B. S., Menkès Christophe, Pethybridge H., Couturier L. I. E., Point David, Leroy B., Receveur A., Hunt B. P. V., Vourey E., Bonnet Sophie, Rodier Martine, Raimbault P., Feunteun E., Kuhnert P. M., Munaron Jean-Marie, Lebreton B., Otake T., Letourneur Y. (2017). Trophic position increases with thermocline depth in yellowfin and bigeye tuna across the Western and Central Pacific Ocean. Progress in Oceanography, 154, p. 49-63. ISSN 0079-6611.
   Identifiant IRD :  fdi:010070302
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5. Bonnet Sophie, Caffin M., Berthelot H., Moutin T. (2017). Hot spot of N-2 fixation in the western tropical South Pacific pleads for a spatial decoupling between N-2 fixation and denitrification. Proceedings of the National Academy of Sciences of the United States of America, 114 (14), p. E2800-E2801. ISSN 0027-8424.
   Identifiant IRD :  fdi:010069443
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6. Benavides M., Berthelot H., Duhamel S., Raimbault P., Bonnet Sophie. (2017). Dissolved organic matter uptake by Trichodesmium in the Southwest Pacific. Scientific Reports - Nature, 7, p. art. 41315 [6 p.]. ISSN 2045-2322.
   Identifiant IRD :  fdi:010068922
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2016

Articles référencés dans le Web of Science

1. Benavides M., Houlbrèque Fanny, Camps M., Lorrain Anne, Grosso O., Bonnet Sophie. (2016). Diazotrophs : a non-negligible source of nitrogen for the tropical coral Stylophora pistillata. Journal of Experimental Biology, 219 (17), p. 2608-2612. ISSN 0022-0949.
   Identifiant IRD :  fdi:010068211
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2. Knapp A. N., Fawcett S. E., Martinez-Garcia A., Leblond N., Moutin T., Bonnet Sophie. (2016). Nitrogen isotopic evidence for a shift from nitrate- to diazotroph-fueled export production in the VAHINE mesocosm experiments. Biogeosciences, 13 (16), p. 4645-4657. ISSN 1726-4170.
   Identifiant IRD :  fdi:010068148
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3. Gimenez A., Baklouti M., Bonnet Sophie, Moutin T. (2016). Biogeochemical fluxes and fate of diazotroph-derived nitrogen in the food web after a phosphate enrichment : modeling of the VAHINE mesocosms experiment. Biogeosciences, 13 (17), p. 5103-5120. ISSN 1726-4170.
   Identifiant IRD :  fdi:010068147
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4. Camps M., Benavides M., Lema K. A., Bourne D. G., Grosso O., Bonnet Sophie. (2016). Released coral mucus does not enhance planktonic N-2 fixation rates. Aquatic Microbial Ecology, 77 (1), p. 51-63. ISSN 0948-3055.
   Identifiant IRD :  fdi:010068113
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5. Bonnet Sophie, Berthelot H., Turk-Kubo K., Cornet-Barthaux V., Fawcett S., Berman-Frank I., Barani A., Gregori G., Dekaezemacker J., Benavides M., Capone D. G. (2016). Diazotroph derived nitrogen supports diatom growth in the South West Pacific : a quantitative study using nanoSIMS. Limnology and Oceanography, 61 (5), p. 1549-1562. ISSN 0024-3590.
   Identifiant IRD :  fdi:010068173
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6. Bonnet Sophie, Baklouti M., Gimenez A., Berthelot H., Berman-Frank I. (2016). Biogeochemical and biological impacts of diazotroph blooms in a low-nutrient, low-chlorophyll ecosystem : synthesis from the VAHINE mesocosm experiment (New Caledonia). Biogeosciences, 13 (15), p. 4461-4479. ISSN 1726-4170.
   Identifiant IRD :  fdi:010068122
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7. Spungin D., Pfreundt U., Berthelot H., Bonnet Sophie, AlRoumi D., Natale F., Hess W. R., Bidle K. D., Berman-Frank I. (2016). Mechanisms of Trichodesmium demise within the New Caledonian lagoon during the VAHINE mesocosm experiment. Biogeosciences, 13 (14), p. 4187-4203. ISSN 1726-4170.
   Identifiant IRD :  fdi:010067774
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8. Pfreundt U., Spungin D., Bonnet Sophie, Berman-Frank I., Hess W. R. (2016). Global analysis of gene expression dynamics within the marine microbial community during the VAHINE mesocosm experiment in the southwest Pacific. Biogeosciences, 13 (14), p. 4135-4149. ISSN 1726-4170.
   Identifiant IRD :  fdi:010067775
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9. Berthelot H., Bonnet Sophie, Grosso O., Cornet V., Barani A. (2016). Transfer of diazotroph-derived nitrogen towards non-diazotrophic planktonic communities : a comparative study between Trichodesmium erythraeum, Crocosphaera watsonii and Cyanothece sp.. Biogeosciences, 13 (13), p. 4005-4021. ISSN 1726-4170.
   Identifiant IRD :  fdi:010067752
    Open Access


10. Van Wambeke F., Pfreundt U., Barani A., Berthelot H., Moutin T., Rodier Martine, Hess W. R., Bonnet Sophie. (2016). Heterotrophic bacterial production and metabolic balance during the VAHINE mesocosm experiment in the New Caledonia lagoon. Biogeosciences, 13 (11), p. 3187-3202. ISSN 1726-4170.
    Identifiant IRD :  fdi:010067664
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11. Benavides M., Bonnet Sophie, Hernandez N., Martinez-Perez A. M., Nieto-Cid M., Alvarez-Salgado X. A., Banos I., Montero M. F., Mazuecos I. P., Gasol J. M., Osterholz H., Dittmar T., Berman-Frank I., Aristegui J. (2016). Basin-wide N-2 fixation in the deep waters of the Mediterranean Sea. Global Biogeochemical Cycles, 30 (6), 952-961. ISSN 0886-6236.
    Identifiant IRD :  fdi:010080242
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12. Pfreundt U., Van Wambeke F., Caffin M., Bonnet Sophie, Hess W. R. (2016). Succession within the prokaryotic communities during the VAHINE mesocosms experiment in the New Caledonia lagoon. Biogeosciences, 13 (8), p. 2319-2337. ISSN 1726-4170.
    Identifiant IRD :  fdi:010066987
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13. Hunt B. P. V., Bonnet Sophie, Berthelot H., Conroy B. J., Foster R. A., Pagano Marc. (2016). Contribution and pathways of diazotroph-derived nitrogen to zooplankton during the VAHINE mesocosm experiment in the oligotrophic New Caledonia lagoon. Biogeosciences, 13 (10), p. 3131-3145. ISSN 1726-4170.
    Identifiant IRD :  fdi:010067597
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14. Bonnet Sophie, Moutin T., Rodier Martine, Grisoni J. M., Louis F., Folcher Eric, Bourgeois Bertrand, Boré Jean-Michel, Renaud Armelle. (2016). Introduction to the project VAHINE : VAriability of vertical and tropHlc transfer of diazotroph derived N in the south wEst Pacific. Biogeosciences, 13 (9), p. 2803-2814. ISSN 1726-4170.
    Identifiant IRD :  fdi:010066985
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15. Bonnet Sophie, Berthelot H., Turk-Kubo K., Fawcett S., Rahav E., L'Helguen S., Berman-Frank I. (2016). Dynamics of N-2 fixation and fate of diazotroph-derived nitrogen in a low-nutrient, low-chlorophyll ecosystem : results from the VAHINE mesocosm experiment (New Caledonia). Biogeosciences, 13 (9), p. 2653-2673. ISSN 1726-4170.
    Identifiant IRD :  fdi:010066984
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