@article{fdi:010093518,
  title = {{N}ano{ASV} : a snakemake workflow for reproducible field-based {N}anopore full-length 16{S} metabarcoding amplicon data analysis},
  author = {{C}ousson, {A}. and {M}ah{\'e}, {F}. and {G}uyet, {U}. and {R}azafimahafaly, {D}. and {B}ernard, {L}aetitia},
  editor = {},
  language = {{ENG}},
  abstract = {{N}ano{ASV} is a conda environment and snakemake-based workflow using state-of-the-art bioinformatics software to process full-length {SSU} r{RNA} (16{S}/18{S}) amplicons acquired with {O}xford {N}anopore {S}equencing technology. {I}ts strength lies in reproducibility, portability, and the possibility to run offline, allowing in-field analysis. {I}t can be installed on the {N}anopore {MK}1{C} sequencing device and process data locally.},
  keywords = {},
  booktitle = {},
  journal = {{B}ioinformatics},
  volume = {41},
  numero = {3},
  pages = {btaf089 [4 p.]},
  ISSN = {1367-4803},
  year = {2025},
  DOI = {10.1093/bioinformatics/btaf089},
  URL = {https://www.documentation.ird.fr/hor/fdi:010093518},
}