<?xml version="1.0"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>Dataset from de novo transcriptome assembly of Myristica fatua leaves using MinION nanopore sequencer</dc:title>
  <dc:creator>Matra, D. D.</dc:creator>
  <dc:creator>Adrian, M.</dc:creator>
  <dc:creator>Karmanah</dc:creator>
  <dc:creator>Kusuma, J.</dc:creator>
  <dc:creator>/Duminil, J&#xE9;r&#xF4;me</dc:creator>
  <dc:creator>Sobir</dc:creator>
  <dc:creator>Poerwanto, R.</dc:creator>
  <dc:subject>Conservation</dc:subject>
  <dc:subject>Genetic diversity</dc:subject>
  <dc:subject>Long-reads sequencing</dc:subject>
  <dc:subject>Spices</dc:subject>
  <dc:subject>Full-length transcript</dc:subject>
  <dc:description>Myristica fatua is a tropical fruit tree species originating from Indonesia. Very few genomic resources are available for the species. We developed a full-length transcriptome assembly using long-read sequencing (MinION Nanopore technology) and produced 4.3 million reads (3.5 G of bases). The assem-bled full-length transcript was constructed using the RAT-TLE program and assembled 21,098 transcripts. The transcript ranged from 201 - 14,174 bp, and N50 was 2,017 bp. The transcripts were annotated with the UNIPROT database us-ing BlastX. The functional annotation was performed using Blast2go software. The 8,445 microsatellite motif-containing contigs were identified. The raw reads are deposited in the ENA (European Nucleotide Archive) with ENA experiment ac-cession number ERX6798613.</dc:description>
  <dc:date>2023</dc:date>
  <dc:type>text</dc:type>
  <dc:identifier>https://www.documentation.ird.fr/hor/fdi:010086900</dc:identifier>
  <dc:identifier>fdi:010086900</dc:identifier>
  <dc:identifier>Matra D. D., Adrian M., Karmanah, Kusuma J., Duminil J&#xE9;r&#xF4;me, Sobir, Poerwanto R.. Dataset from de novo transcriptome assembly of Myristica fatua leaves using MinION nanopore sequencer. 2023, 46,  108838 [6 p.]</dc:identifier>
  <dc:language>EN</dc:language>
  <dc:coverage>INDONESIE</dc:coverage>
</oai_dc:dc>
