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      <title>SARS-CoV-2 vaccination and protection against clinical disease : a retrospective study, Bouches-du-Rhone District, Southern France, 2021</title>
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    <abstract>From January 18th to August 13th, 2021, 13,804 unvaccinated and 1,156 patients who had received at least one COVID-19 vaccine dose were tested qPCR-positive for SARS-CoV-2 in our center. Among vaccinated patients, 949, 205 and 2 had received a single, two or three vaccine doses, respectively. Most patients (80.3%) had received the Pfizer-BioNTech vaccine. The SARS-CoV-2 variants infecting vaccinated patients varied over time, reflecting those circulating in the Marseille area, with a predominance of the Marseille-4/20A.EU2 variant from weeks 3 to 6, of the Alpha/20I variant from weeks 7 to 25, and of the Delta/21A variant from week 26. SARS-CoV-2 infection was significantly more likely to occur in the first 13 days post-vaccine injection in those who received a single dose (48.9%) than two doses (27.4%, p&lt; 10(-3)). Among 161 patients considered as fully vaccinated, i.e., &gt;14 days after the completion of the vaccinal scheme (one dose for Johnson and Johnson and two doses for Pfizer/BioNTech, Moderna and Sputnik vaccines), 10 (6.2%) required hospitalization and four (2.5%) died. Risks of complications increased with age in a nonlinear pattern, with a first breakpoint at 54, 33, and 53 years for death, transfer to ICU, and hospitalization, respectively. Among patients infected by the Delta/21A or Alpha/20I variants, partial or complete vaccination exhibited a protective effect with a risk divided by 3.1 for mortality in patients &gt;= 55 years, by 2.8 for ICU transfer in patients &gt;= 34 years, and by 1.8 for hospitalization in patients &gt;= 54 years. Compared to partial vaccination, complete vaccination provided an even stronger protective effect, confirming effectiveness to prevent severe forms of COVID-19.</abstract>
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      <topic>COVID-19</topic>
      <topic>SARS-CoV-2</topic>
      <topic>vaccine</topic>
      <topic>death</topic>
      <topic>intensive care</topic>
      <topic>hospitalization</topic>
      <topic>protective effect</topic>
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      <geographic>FRANCE</geographic>
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        <title>Frontiers in Microbiology</title>
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          <number>12</number>
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          <list>796807 [10 ]</list>
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        <dateIssued>2022</dateIssued>
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    <identifier type="uri">https://www.documentation.ird.fr/hor/fdi:010084244</identifier>
    <identifier type="doi">10.3389/fmicb.2021.796807</identifier>
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