Durant E. auteur aut IRD Sabot François auteur aut IRD Conte M. auteur aut IRD Rouard M. auteur aut IRD text journalArticle eng text/pdf reformatted digital access Motivation: Pangenomics evolved since its first applications on bacteria, extending from the study of genes for a given population to the study of all of its sequences available. While multiple methods are being developed to construct pangenomes in eukaryotic species there is still a gap for efficient and user-friendly visualization tools. Emerging graph representations come with their own challenges, and linearity remains a suitable option for user-friendliness. Results: We introduce Panache, a tool for the visualization and exploration of linear representations of gene-based and sequence-based pangenomes. It uses a layout similar to genome browsers to display presence absence variations and additional tracks along a linear axis with a pangenomics perspective. specialized 020 122 37 23 4556-4558 2021 1367-4803 https://www.documentation.ird.fr/hor/fdi:010083836 10.1093/bioinformatics/btab688 1367-4803 [F B010083836] https://www.documentation.ird.fr/hor/fdi:010083836 https://horizon.documentation.ird.fr/exl-doc/pleins_textes/2022-01/010083836.pdf IRD - Base Horizon / Pleins textes 2022-01-12 2025-02-24 fdi:010083836 fre