%0 Journal Article %9 ACL : Articles dans des revues avec comité de lecture répertoriées par l'AERES %A Krafft, E. %A Denolly, S. %A Boson, B. %A Angelloz-Pessey, S. %A Levaltier, S. %A Nesi, N. %A Corbet, S. %A Leterrier, B. %A Fritz, Matthieu %A Leroy, Eric %A Gouilh, M. A. %A Cosset, F. L. %A Kodjo, A. %A Legros, V. %T Report of one-year prospective surveillance of SARS-CoV-2 in dogs and cats in France with various exposure risks : confirmation of a low prevalence of shedding, detection and complete sequencing of an Alpha variant in a cat %D 2021 %L fdi:010083191 %G ENG %J Viruses %K SARS-CoV-2 ; variants ; prevalence ; sequencing ; zoonosis %K FRANCE %M ISI:000700163200001 %N 9 %P 1759 [12 ] %R 10.3390/v13091759 %U https://www.documentation.ird.fr/hor/fdi:010083191 %> https://horizon.documentation.ird.fr/exl-doc/pleins_textes/2021-11/010083191.pdf %V 13 %W Horizon (IRD) %X Despite the probable zoonotic origin of SARS-CoV-2, only limited research efforts have been made to understand the role of companion animals in SARS-CoV-2 epidemiology. According to recent serological prevalence studies, human-to-companion animal transmission is quite frequent, which led us to consider that the risk of SARS-CoV-2 transmission from animal to human, albeit negligible in the present context, may have been underestimated. In this study, we provide the results of a prospective survey that was conducted to evaluate the SARS-CoV-2 isolation rate by qRT-PCR in dogs and cats with different exposure risks and clinical statuses. From April 2020 to April 2021, we analyzed 367 samples and investigated the presence of SARS-CoV-2 RNA using qRT-PCR. Only four animals tested positive, all of them being cats. Three cats were asymptomatic and one presented a coryza-like syndrome. We describe in detail the infection in two cats and the associated clinical characteristics. Importantly, we obtained SARS-CoV-2 genomes from one infected animal and characterized them as Alpha variants. This represents the first identification of the SARS-CoV-2 Alpha variant in an infected animal in France. %$ 052 ; 080