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    <titleInfo>
      <title>Identification of atypical El Tor V-cholerae O1 Ogawa hosting SXT element in Senegal, Africa</title>
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    <abstract>Vibrio cholerae O1 is the causative agent of cholera with classical and El Tor, two well-established biotypes. In last 20 years, hybrid strains of classical and El Tor and variant El Tor which carry classical ctxB have emerged worldwide. In 2004-2005, Senegal experienced major cholera epidemic with a number of cases totalling more than 31719 with approximately 458 fatal outcomes (CFR, 1.44%). In this retrospective study, fifty isolates out of a total of 403 V. cholerae biotype El Tor serovar Ogawa isolates from all areas in Senegal during the 2004-2005 cholera outbreak were randomly selected. Isolates were characterized using phenotypic and genotypic methods. The analysis of antibiotic resistance patterns revealed the predominance of the S-Su-TCY-Tsu phenotype (90% of isolates). The molecular characterization of antibiotic resistance revealed the presence of the SXT element, a self-transmissible chromosomally integrating element in all isolates. Most of V. cholerae isolates had an intact virulence cassette (86%) (ctx, zot, ace genes). All isolates tested gave amplification with primers for classical CT, and 10/50 (20%) of isolates carried classical and El Tor ctxB. The study reveals the presence of atypical V. cholerae O1 El Tor during cholera outbreak in Senegal in 2004-2005.</abstract>
    <targetAudience authority="marctarget">specialized</targetAudience>
    <subject>
      <topic>Vibrio cholerae</topic>
      <topic>O1 virulence</topic>
      <topic>antibioresistance</topic>
      <topic>SXT element</topic>
      <topic>Senegal</topic>
    </subject>
    <subject authority="local">
      <geographic>SENEGAL</geographic>
    </subject>
    <classification authority="local">052</classification>
    <classification authority="local">050</classification>
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      <titleInfo>
        <title>Frontiers in Microbiology</title>
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      <part>
        <detail type="volume">
          <number>8</number>
        </detail>
        <extent unit="pages">
          <list> art. 748 [7 p.]</list>
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      <originInfo>
        <dateIssued>2017</dateIssued>
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      <identifier type="issn">1664-302X</identifier>
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    <identifier type="uri">https://www.documentation.ird.fr/hor/fdi:010070052</identifier>
    <identifier type="doi">10.3389/fmicb.2017.00748</identifier>
    <identifier type="issn">1664-302X</identifier>
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      <recordCreationDate encoding="w3cdtf">2017-07-03</recordCreationDate>
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        <languageTerm authority="iso639-2b">fre</languageTerm>
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