@article{fdi:010062581,
  title = {{A}n extensive analysis of the {A}frican rice genetic diversity through a global genotyping},
  author = {{O}rjuela, {J}. and {S}abot, {F}ran{\c{c}}ois and {C}h{\'e}ron, {S}ophie and {V}igouroux, {Y}ves and {A}dam, {H}{\'e}l{\`e}ne and {C}hrestin, {H}arold and {S}anni, {K}. and {L}orieux, {M}athias and {G}hesqui{\`e}re, {A}lain},
  editor = {},
  language = {{ENG}},
  abstract = {{W}e present here the first curated collection of wild and cultivated {A}frican rice species. {F}or that, we designed specific {SNP}s and were able to structure these very low diverse species. {O}ryza glaberrima, the cultivated {A}frican rice, is endemic from {A}frica. {T}his species and its direct ancestor, {O}. barthii, are valuable tool for improvement of {A}sian rice {O}. sativa in terms of abiotic and biotic stress resistance. {H}owever, only a few limited studies about the genetic diversity of these species were performed. {I}n the present paper, and for the first time at such extend, we genotyped 279 {O}. glaberrima, selected both for their impact in current breeding and for their geographical distribution, and 101 {O}. barthii, chosen based on their geographic origin, using a set of 235 {SNP}s specifically designed for {A}frican rice diversity. {U}sing those data, we were able to structure the individuals from our sample in three populations for {O}. barthii, related to geography, and two populations in {O}. glaberrima; these two last populations cannot be linked however to any currently phenotyped trait. {M}oreover, we were also able to identify misclassification in {O}. glaberrima as well as in {O}. barthii and identified new form of {O}. sativa from the set of {A}frican varieties.},
  keywords = {{AFRIQUE}},
  booktitle = {},
  journal = {{T}heoretical and {A}pplied {G}enetics},
  volume = {127},
  numero = {10},
  pages = {2211--2223},
  ISSN = {0040-5752},
  year = {2014},
  DOI = {10.1007/s00122-014-2374-z},
  URL = {https://www.documentation.ird.fr/hor/fdi:010062581},
}