<?xml version="1.0"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>LoPPS : A long PCR product sequencing method for rapid characterisation of long amplicons</dc:title>
  <dc:creator>/Emonet, S&#xE9;bastien</dc:creator>
  <dc:creator>Grard, G.</dc:creator>
  <dc:creator>Brisbarre, N.</dc:creator>
  <dc:creator>Moureau, G.</dc:creator>
  <dc:creator>Temmam, S.</dc:creator>
  <dc:creator>Charrel, R.</dc:creator>
  <dc:creator>/de Lamballerie, Xavier</dc:creator>
  <dc:subject>sequencing</dc:subject>
  <dc:subject>PCR</dc:subject>
  <dc:subject>RNA viruses</dc:subject>
  <dc:subject>LoPPS</dc:subject>
  <dc:description>Here, we propose an optimised protocol (LoPPS, long PCR product sequencing) which allows the fast, cost-attractive, and high-throughput sequencing of long PCR products. LoPPS constitutes an alternative to the primer-walking technology which is expensive and time consuming but remains the current standard procedure. It is based on the ultrasonic shearing, polishing, and cloning of PCR or RT-PCR products and is compatible with 96- or 384-well microplate systems in which bacterial growth, preparation of plasmid DNA, and sequencing can be automated. We present results obtained from 24 different RT-PCR products (2.5-4.8 kbp long) obtained from various RNA viruses and fully sequenced using LoPPS. The method proved to be robust and fast. It was successfully used on a low amount of DNA and allowed each target nucleotide position to be controlled twice or more, with a final cost which is one-third of that of primer-walking.</dc:description>
  <dc:date>2006</dc:date>
  <dc:type>text</dc:type>
  <dc:identifier>https://www.documentation.ird.fr/hor/fdi:010037790</dc:identifier>
  <dc:identifier>fdi:010037790</dc:identifier>
  <dc:identifier>Emonet S&#xE9;bastien, Grard G., Brisbarre N., Moureau G., Temmam S., Charrel R., de Lamballerie Xavier. LoPPS : A long PCR product sequencing method for rapid characterisation of long amplicons. 2006, 344 (4),  1080-1085</dc:identifier>
  <dc:language>EN</dc:language>
</oai_dc:dc>
