%0 Journal Article
%9 ACL : Articles dans des revues avec comité de lecture non répertoriées par l'AERES
%A Montavon, Céline
%A Bibollet-Ruche, Frédéric
%A Robertson, D.
%A Koumare, B.
%A Mulanga, Claire
%A Esu-Williams, E.
%A Toure, C.
%A Mboup, S.
%A Saman, E.
%A Delaporte, Eric
%A Peeters, Martine
%T The identification of a complex A/G/I/J recombinant HIV type 1 virus in various West African countries
%D 1999
%L fdi:010020996
%G ENG
%J AIDS Research and Human Retroviruses
%@ 0889-2229
%K SIDA ; VIRUS ; STRUCTURE GENETIQUE ; GENOME ; SOUCHE ; PHYLOGENIE ; TECHNIQUE PCR ; ETUDE EXPERIMENTALE
%K VIRUS RECOMBINANT ; COMPLEXE A/G/I/J
%K AFRIQUE ; MALI ; NIGERIA ; SENEGAL ; BAMAKO
%N 18
%P 1702-1712
%R 10.1089/088922299309757
%U https://www.documentation.ird.fr/hor/fdi:010020996
%> https://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_7/b_fdi_53-54/010020996.pdf
%V 15
%W Horizon (IRD)
%X In this sequence note we describe the full-length genome sequence of an HIV-1 isolate originting from the West African country of Mali. The phylogenetic tree analysis from the near full-length genome shows that the 95ML84 strain forms a separate cluster, supported by 100% of the bootstrap values, with the previously described A/G/J/? mosaic virus BFP90 from Burkina Faso. Additional analysis showed that throughout the genome the lowest diversity was seen between the 95ML84 and the BFP90 viruses, and bootscan analysis showed a similar complex genomic structure. In addition to the initial report describing the BFP90 virus as an A/G/J/? recombinant, our data show that for the BFP90 and 95ML84 strains the unclassified region corresponds to subtype 1. The A/G/I/J BFP90 and 95ML84 strains represent the fifth and most complex circulating recombinant form of HIV-1 detected so far, and our data show its presence in various West African countries. Subtype 1 and J sequences, initially considered rare, seem to have broadened their geographical spread by way of these recombinant forms. (Résumé d'auteur)
%$ 052MALTRA03