@article{PAR00014435,
  title = {{S}ylv{X} : a viewer for phylogenetic tree reconciliations},
  author = {{C}hevenet, {F}ran{\c{c}}ois and {D}oyon, {J}. {P}. and {S}cornavacca, {C}. and {J}acox, {E}. and {J}ousselin, {E}. and {B}erry, {V}.},
  editor = {},
  language = {{ENG}},
  abstract = {{M}otivation: {R}econciliation methods aim at recovering the evolutionary processes that shaped the history of a given gene family including events such as duplications, transfers and losses by comparing the discrepancies between the topologies of the associated gene and species trees. {T}hese methods are also used in the framework of host/parasite studies to recover co-diversification scenarios including co-speciation events, host-switches and extinctions. {T}hese evolutionary processes can be graphically represented as nested trees. {T}hese interconnected graphs can be visually messy and hard to interpret, and despite the fact that reconciliations are increasingly used, there is a shortage of tools dedicated to their graphical management. {H}ere we present {S}ylv{X}, a reconciliation viewer which implements classical phylogenetic graphic operators (swapping, highlighting, etc.) and new methods to ease interpretation and comparison of reconciliations (multiple maps, moving, shrinking sub-reconciliations).},
  keywords = {},
  booktitle = {},
  journal = {{B}ioinformatics},
  volume = {32},
  numero = {4},
  pages = {608--613},
  ISSN = {1367-4803},
  year = {2016},
  DOI = {10.1093/bioinformatics/btv625},
  URL = {https://www.documentation.ird.fr/hor/{PAR}00014435},
}