Publications des scientifiques de l'IRD

Massey A., Boennec C., Restrepo Ortiz Claudia, Blanchet C., Alizon S., Sofonea M.T. (2024). Real-time forecasting of COVID-19-related hospital strain in France using a non-Markovian mechanistic model. PloS Computational Biology, 20 (5), e1012124 [22 p.]. ISSN 1553-7358.

Titre du document
Real-time forecasting of COVID-19-related hospital strain in France using a non-Markovian mechanistic model
Année de publication
2024
Type de document
Article référencé dans le Web of Science WOS:001226810300001
Auteurs
Massey A., Boennec C., Restrepo Ortiz Claudia, Blanchet C., Alizon S., Sofonea M.T.
Source
PloS Computational Biology, 2024, 20 (5), e1012124 [22 p.] ISSN 1553-7358
Projects such as the European Covid-19 Forecast Hub publish forecasts on the national level for new deaths, new cases, and hospital admissions, but not direct measurements of hospital strain like critical care bed occupancy at the sub-national level, which is of particular interest to health professionals for planning purposes. We present a sub-national French framework for forecasting hospital strain based on a non-Markovian compartmental model, its associated online visualisation tool and a retrospective evaluation of the real-time forecasts it provided from January to December 2021 by comparing to three baselines derived from standard statistical forecasting methods (a naive model, auto-regression, and an ensemble of exponential smoothing and ARIMA). In terms of median absolute error for forecasting critical care unit occupancy at the two-week horizon, our model only outperformed the naive baseline for 4 out of 14 geographical units and underperformed compared to the ensemble baseline for 5 of them at the 90% confidence level (n = 38). However, for the same level at the 4 week horizon, our model was never statistically outperformed for any unit despite outperforming the baselines 10 times spanning 7 out of 14 geographical units. This implies modest forecasting utility for longer horizons which may justify the application of non-Markovian compartmental models in the context of hospital-strain surveillance for future pandemics.
Plan de classement
Santé : généralités [050] ; Santé : aspects socioculturels, économiques et politiques [056]
Localisation
Fonds IRD [F B010093167]
Identifiant IRD
fdi:010093167
Contact
  • Coordonnées :
    Mission Science Ouverte (MSO)
    IRD - Délégation régionale Île-de-France & Ouest
    Campus Condorcet - Hôtel à projets
    8 cours des Humanités - 93322 Aubervilliers Cedex
    Horizon Pleins textes
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