@article{fdi:010070316, title = {{C}omparison of different genetic distances to test isolation by distance between populations}, author = {{S}{\'e}r{\'e}, {M}. and {T}h{\'e}venon, {S}. and {B}elem, {A}. {M}. {G}. and {D}e {M}eeûs, {T}hierry}, editor = {}, language = {{ENG}}, abstract = {{S}tudying isolation by distance can provide useful demographic information. {T}o analyze isolation by distance from molecular data, one can use some kind of genetic distance or coalescent simulations. {M}olecular markers can often display technical caveats, such as {PCR}-based amplification failures (null alleles, allelic dropouts). {T}hese problems can alter population parameter inferences that can be extracted from molecular data. {I}n this simulation study, we analyze the behavior of different genetic distances in {I}sland (null hypothesis) and stepping stone models displaying varying neighborhood sizes. {I}mpact of null alleles of increasing frequency is also studied. {I}n stepping stone models without null alleles, the best statistic to detect isolation by distance in most situations is the chord distance {DCSE}. {N}evertheless, for markers with genetic diversities {H}-{S}