Gaubert Philippe, Njiokou F., Ngua G., Afiademanyo K., Dufour S., Malekani J., Bi S. G., Tougard C., Olayemi A., Danquah E., Djagoun C. A; M. S., Kaleme P., Mololo C. N., Stanley W., Luo S. J., Antunes A. (2016). Phylogeography of the heavily poached African common pangolin (Pholidota, Manis tricuspis) reveals six cryptic lineages as traceable signatures of Pleistocene diversification. Molecular Ecology, 25 (23), p. 5975-5993. ISSN 0962-1083.
Titre du document
Phylogeography of the heavily poached African common pangolin (Pholidota, Manis tricuspis) reveals six cryptic lineages as traceable signatures of Pleistocene diversification
Année de publication
2016
Auteurs
Gaubert Philippe, Njiokou F., Ngua G., Afiademanyo K., Dufour S., Malekani J., Bi S. G., Tougard C., Olayemi A., Danquah E., Djagoun C. A; M. S., Kaleme P., Mololo C. N., Stanley W., Luo S. J., Antunes A.
Source
Molecular Ecology, 2016,
25 (23), p. 5975-5993 ISSN 0962-1083
Knowledge on faunal diversification in African rainforests remains scarce. We used phylogeography to assess (i) the role of Pleistocene climatic oscillations in the diversification of the African common pangolin (Manis tricuspis) and (ii) the utility of our multilocus approach for taxonomic delineation and trade tracing of this heavily poached species. We sequenced 101 individuals for two mitochondrial DNA (mtDNA), two nuclear DNA and one Y-borne gene fragments (totalizing 2602 bp). We used a time-calibrated, Bayesian inference phylogenetic framework and conducted character-based, genetic and phylogenetic delineation of species hypotheses within African common pangolins. We identified six geographic lineages partitioned into western Africa, Ghana, the Dahomey Gap, western central Africa, Gabon and central Africa, all diverging during the Middle to Late Pleistocene. MtDNA (cytochrome b + control region) was the sole locus to provide diagnostic characters for each of the six lineages. Tree-based Bayesian delimitation methods using single-and multilocus approaches gave high support for 'species' level recognition of the six African common pangolin lineages. Although the diversification of African common pangolins occurred during Pleistocene cyclical glaciations, causative correlation with traditional rainforest refugia and riverine barriers in Africa was not straightforward. We conclude on the existence of six cryptic lineages within African common pangolins, which might be of major relevance for future conservation strategies. The high discriminative power of the mtDNA markers used in this study should allow an efficient molecular tracing of the regional origin of African common pangolin seizures.
Plan de classement
Sciences du monde animal [080]
;
Etudes, transformation, conservation du milieu naturel [082]
Description Géographique
AFRIQUE DE L'OUEST ; TOGO ; BENIN ; AFRIQUE CENTRALE ; NIGERIA ; ZONE TROPICALE
Localisation
Fonds IRD [F B010068747]
Identifiant IRD
fdi:010068747
