@article{PAR00002160,
  title = {{O}ryza {T}ag {L}ine, a phenotypic mutant database for the {G}enoplante rice insertion line library},
  author = {{L}armande, {P}. and {G}ay, {C}. and {L}orieux, {M}athias and {P}erin, {C}. and {B}ouniol, {M}. and {D}roc, {G}. and {S}allaud, {C}. and {P}erez, {P}. and {B}arnola, {I}. and {B}iderre {P}etit, {C}. and {M}artin, {J}. and {M}orel, {J}. {B}. and {J}ohnson, {A}. {A}. {T}. and {B}ourgis, {F}abienne and {G}hesqui{\`e}re, {A}lain and {R}uiz, {M}. and {C}ourtois, {B}. and {G}uiderdoni, {E}.},
  editor = {},
  language = {{ENG}},
  abstract = {{T}o organize data resulting from the phenotypic characterization of a library of 30 000 {T}-{DNA} enhancer trap ({ET}) insertion lines of rice ({O}ryza sativa {L} cv. {N}ipponbare), we developed the {O}ryza {T}ag {L}ine ({OTL}) database ("http://urgi.versailles.inra.fr/{O}ryza{T}ag{L}ine"). {OTL} structure facilitates forward genetic search for specific phenotypes, putatively resulting from gene disruption, and/or for {GUSA} or {GFP} reporter gene expression patterns, reflecting {ET}-mediated endogenous gene detection. {I}n the latest version, {OTL} gathers the detailed morpho-physiological alterations observed during field evaluation and specific screens in a first set of 13 928 lines. {D}etection of {GUS} or {GFP} activity in specific organ/tissues in a subset of the library is also provided. {S}earch in {OTL} can be achieved through trait ontology category, organ and/or developmental stage, keywords, expression of reporter gene in specific organ/tissue as well as line identification number. {OTL} now contains the description of 9721 mutant phenotypic traits observed in 2636 lines and 1234 {GUS} or {GFP} expression patterns. {E}ach insertion line is documented through a generic passport data including production records, seed stocks and {FST} information. 8004 and 6101 of the 13 928 lines are characterized by at least one {T}-{DNA} and one {T}os17 {FST}, respectively that {OTL} links to the rice genome browser {O}ry{G}enes{DB}.},
  keywords = {},
  booktitle = {},
  journal = {{N}ucleic {A}cids {R}esearch},
  volume = {36},
  numero = {{S}pecial {I}ssue},
  pages = {{D}1022--{D}1027},
  ISSN = {0305-1048},
  year = {2008},
  DOI = {10.1093/nar/gkm762},
  URL = {https://www.documentation.ird.fr/hor/{PAR}00002160},
}